Array 1 34390-37409 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAOX010000012.1 Arcanobacterium phocae strain SBAK872 NODE_12_length_54163_cov_73.460711, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 34390 29 100.0 33 ............................. ATGATTTTAATATCGATATACCAATTCGTACTT 34452 29 100.0 32 ............................. TTCCGCAACGCCGTTGAGGAAGCACACATCAC 34513 29 100.0 32 ............................. CAGATACCTACACCGCACGTCGAGCGGATAGA 34574 29 100.0 32 ............................. CTGAATACGAAAATAGCCGGCGTGTTAAACCG 34635 29 100.0 32 ............................. GGCGTAATCAATTTCTTTGTAAATTCCTCAGC 34696 29 100.0 32 ............................. AAATCTTCTTCACAGGGGGACTTCCCTGCTGG 34757 29 100.0 32 ............................. GCCATGCGTGCGTTGCGAGCGTTCCTATTAGC 34818 29 100.0 32 ............................. ATTGATTGTTAATGCGTCATTGAAGCGTGCAT 34879 29 100.0 32 ............................. AAGCTATTGCATTATTTACGAAGTTTGCCATT 34940 29 100.0 32 ............................. TGAATACTGAATCAACCCGGCGTTCAACGCTC 35001 29 100.0 32 ............................. TGATCGAAGATTTCTATGAGGTTCAAGCGAAT 35062 29 100.0 32 ............................. ACTGAGAAACAACCCCAGCCCCAGGAACCGTT 35123 29 100.0 33 ............................. AGTGGCTCCGTTGAGGAGTAGTACGAAATGATT 35185 29 100.0 32 ............................. CGTCTAAGTTGCCCCTTAGGCGGTCATCTATA 35246 29 93.1 32 ..........................G.G GTGATGGGTTCGCCACTGGCCTTCTACCAGTA 35307 29 100.0 32 ............................. ATTTTCGGACATAACTTCTTCTCACCTACCGC 35368 29 100.0 32 ............................. GATTTGTGCCCAGTCGTCGAGGTTCTCCCCGA 35429 29 100.0 32 ............................. GACATCGGAAAGGGTTGGATCCCATGAGCGCT 35490 29 100.0 32 ............................. GTTTTGACGTTCCATGGAATCCCGCCATTTGC 35551 29 100.0 32 ............................. AATTTCGAGCTATGCGATCGGCAGGAACGCTG 35612 29 100.0 32 ............................. AGGCTCTACGAGATAGCGGAAGGAGTTGGGAA 35673 29 100.0 32 ............................. GGTTCGTCCTCTATCCTGCCTGCACTACTTTT 35734 29 100.0 32 ............................. GAAAAGATCATTGAAAACCGTCCACGGCTACA 35795 29 100.0 32 ............................. TGTTCCAGTAATAAAGCTAGCTATTTCTTTGA 35856 29 100.0 32 ............................. AGCTTATATCGAGAGTCTAACTGGCGAGAACC 35917 29 100.0 32 ............................. GAATGCGTAAGGTTTTCGAAGTGTAGTCATAC 35978 29 100.0 32 ............................. GACTTGGAAGGTGCTATCTCGCCGACCTTCCT 36039 29 96.6 33 ............................A CCAAAAGCTACTCGGAAGGCGCGTTCTTCGGGG 36101 29 100.0 32 ............................. CTCGGCCTGGGCTGGTGTTATAGTTTTTTCAT 36162 29 96.6 32 ............................T TAGTGCAGTACCGGAGTTGGCGTACACGGATG 36223 29 100.0 32 ............................. GAGATACCGTTCACGAAACCACGGATAACGTT 36284 29 100.0 32 ............................. CGTTATCAACATCGAAAATCTGGCTAGACTCC 36345 29 100.0 32 ............................. TTTTGGGTATAAAAATATCCCCTGCGCTTTTC 36406 29 100.0 32 ............................. ATACTGTAAATTCCTCCTGTCCACTCTCCCGG 36467 29 100.0 32 ............................. TGGTGTGCCTGTCGAGTTACTTGCTGGACCTC 36528 29 100.0 32 ............................. ATCAGCGAATATTCCCGCCCGTCCAGTGACGG 36589 29 100.0 32 ............................. TTGCGAGTCTTGATTGTAGCGCCGATAATCGT 36650 29 100.0 32 ............................. TATATCCGAAGGGCTGGATTGTCAAGAACGCT 36711 29 100.0 32 ............................. GAGCCACCCCAAGACAACCGTTAAAGAATCCA 36772 29 100.0 32 ............................. TGCTTTGGTGCGCGCTGCTGAGCTGATGGCGC 36833 29 100.0 32 ............................. ACAGCTTCGAGAATGGCAAGAAGCTGGTCGCC 36894 29 100.0 31 ............................. TACACGGGGGAGCTTTTTGAAGCTACTCCAG 36954 29 100.0 32 ............................. AAGGTCTAATCCTTCCGCCTGGTCAAGAGGGT 37015 29 89.7 32 ..........................CTT TCTCGCATTGCTGCAAGATTTGCTGTACTTGT 37076 29 100.0 32 ............................. AGGAGGTGCGCTAAAAATCGAGCTAGTAGATG 37137 29 100.0 32 ............................. ACATCATGGTATGCCCTCCAAACCGTTGAAGA 37198 29 100.0 32 ............................. TTGCTGTGTAGGACGAAATCGTTGAAATGGTT 37259 29 100.0 32 ............................. GGTGGAATTAGCTGTGCGTCTTGCACTTTCGC 37320 29 96.6 32 ............................G TGCTCGCGGACATGACGTGACGCGCACCGTCG 37381 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================= ================== 50 29 99.4 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGCTTTCGTTAGT # Right flank : CAAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //