Array 1 17833-16272 **** Predicted by CRISPRDetect 2.4 *** >NZ_NUXC01000066.1 Bacillus cereus strain AFS081508 AFS081508_95_H6_Contig66_140514, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 17832 32 100.0 34 ................................ ATGTACTCCATCCCTGCTGGATTATCGCCAATTT 17766 32 100.0 33 ................................ TATAATGTTGATTCAGCAGGAAACGAATCACCT 17701 32 100.0 34 ................................ ATCTTCAGAGCAAGAAGAAATACCGGATTACCTT 17635 32 96.9 34 .............N.................. TACCCATTTCGTTCCATCATAAGTTAAATGTCGT NTGGAT [17617] 17563 32 100.0 36 ................................ GTTCCGTTTCATTCGGCATAATACGAAACATGCCAA 17495 32 100.0 34 ................................ TAAGCTTGTCCAATTGGCGATTGAATGGGGAGTT 17429 32 100.0 35 ................................ ATTCCCTTTACACGGTTACACAGCGGATAAACTGA 17362 32 100.0 35 ................................ AATAGAGCTTTTGTGTTACCAGGTAAGTCTTCAAA 17295 32 100.0 34 ................................ ATATGTTCTATTGAACGCATGAAACTAGGGCGCA 17229 32 100.0 34 ................................ TTATTTCAAAAGGTGTACTTTCCACAATAGAAGG 17163 32 100.0 35 ................................ ATAATGTGATACAAAAGGTCTGTAATCACATCTTT 17096 32 100.0 35 ................................ TTTGCTACCAAAAAGAAAAAGGAAGATGAGGAAGA 17029 32 100.0 33 ................................ TATGATCCAAAAGGATATGCCGGCGCTCGTGAA 16964 32 100.0 33 ................................ CTCCTTGAGTACCTTATTTATCTCGGCAGTTAT 16899 32 100.0 34 ................................ ATGGTATTTATAATATTGTTAAGTCCCGAAGCTA 16833 32 100.0 34 ................................ ACGATCCACCGGAAATCCAACGTAAAATGCAATG 16767 32 100.0 35 ................................ CACCAGAGCAACTAGATATCATTGCCGAATACGGA 16700 32 100.0 33 ................................ AGCTTGAAGAAGGCGATTACGCTACTACTTATG 16635 32 100.0 34 ................................ TTATCATTTAAAAAGCATCAAGCAAGATAAAGAG 16569 32 100.0 34 ................................ TATAGTTTATTAATCTCTTGTATCGTTAGAGGTT 16503 32 100.0 35 ................................ ACTTATAACGCGTTGTTTATAAAGAGTTTTAAGCA 16436 32 100.0 34 ................................ TGTAATGATTGTGGTATTGGAGTAGAAAAACGAG 16370 32 100.0 35 ................................ ATTGATTATCTAAGAGACATTCATCATTTAAACCC 16303 32 84.4 0 ........C.......A.A.......A...G. | ========== ====== ====== ====== ================================ ==================================== ================== 24 32 99.2 34 GTCGCACCTCTTATAGGTGCGTGGATTGAAAT # Left flank : TAGATGAATATCCACCATTTTTATGGAAGTAGGTGTAACTGTTGCTATTATTAATAACATATGATGTAAGCACTGTTAGCGGTGCTGGACAAAAAAGGTTGCGAAAAGTTTCAAAAACATGTCAAAATTATGGTCAACGAGTCCAAAACTCAGTGTTTGAATGCGTTATAGATGCAACTCAATTTGCTACTTTAAAAATGGAACTAATTAAAATTATAGATGAAGATGAGGATAGTCTCAGATTTTATCAGTTAGGTAATAACTATAAAAATAAGGTCGAACATATTGGTGTAAAAGAATCAATTGATTTAGAAAGTCCTTTAATTTTTTAGGTGCGAACGTATAGCACACATGAAATTCCCAGTACATTCGCACCTGTATTTTCATAATTTGTGATTAAAATTTATGATTTTCTATACAAATTTCTTTATTAAATAAATAACTTGCATATTTTCGAACAGAATTAACGCATTTGTGTATGATTTTGAACACAAATCGGG # Right flank : AGTGGAAAATCCACAAACAACAAGCATCCAGCTCTCCAAAAAGCACCGTATTCCCTTTACCATCTTTGAAATATTTAGAAGAAAGCTAACAAAAAAATCATGAAAGGGTTACCACCAATTCCCATCAACTTAAGAAATTGGTTATTTCCAAAAACGAAAAAAGCGAGCTAAATTCTTATAAATGACTATAGAGATATTTTTTTGTTTTTGGGGGTACTTCAAAATTTTAGCTTGATAGCCCCGGGATATTTTAAAATCTTAGCATGATGGGCATGGACATAAACCCCACTTTAACGCCACTTTTTAAACAACTTTATTATTCGTGATCAAATTTATCTACTCATTAACTTATCAATCTTGATGACTTAGTAAATGCTGAATTTATAACAGAAGAAAATACACATAAAAAAGCGACATATCGCTATGTCGCTTTTCACATCATCTTACTATTAAACTACACTTGTAACATTTGATTAATTAAAGCCGCTGCCTCTCCACGA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCTTATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,9.27 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //