Array 1 22864-26011 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXWA01000060.1 Psychrobacter sp. SHUES1 NODE_46_length_27052_cov_29.403, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 22864 28 100.0 32 ............................ ATTCTTTGCGCCATTTGATCGTAACCAAAATC 22924 28 100.0 32 ............................ ATTCTATTTGCATGATCACGATCAATATAATC 22984 28 100.0 32 ............................ TTTAACTGGTACGCCTGTTTATGAAAACCTAC 23044 28 100.0 32 ............................ GTATATAGCAAAGTCGCCCACCACCCCAAGTA 23104 28 100.0 32 ............................ AGTAGATGCGATGGAAGACCCGATGTTAGCAC 23164 28 100.0 32 ............................ ACGCCACCTAGTAAACTATTCATTATCACTCA 23224 28 100.0 32 ............................ AACACGCTTGCTCAATACTTAGACGCTGCAAA 23284 28 100.0 32 ............................ GTCAGCTTTGCCATGGGATTGGACGGCTCACT 23344 28 100.0 32 ............................ GTACCGTGGCGGATTTCCCATTCGACGTTTTC 23404 28 100.0 33 ............................ CCAAATATTTACGACCCTAAAAACAAACGCGAC 23465 28 100.0 32 ............................ ATCAAAAAATGCTATGGGTGTTTGGCGAGCTA 23525 28 100.0 32 ............................ ATACTACCGTTAGCCAATAAAAAATATTTTCA 23585 28 100.0 32 ............................ TCAATCATTAAAGGTAAATCATTAGCGTCAAA 23645 28 100.0 32 ............................ ATCGGTTTGCACATCAATTGCATAGCCGACTT 23705 28 100.0 32 ............................ AGTCGTCGGCTGCACCAGCGAGGGGCAAGCAT 23765 28 100.0 32 ............................ ACTTCGTTGTTGTCATAAGCTGCTTTTAGCTT 23825 28 100.0 32 ............................ AGCGACCAGCTTCAGATGCTCTTCGCACAATC 23885 28 100.0 32 ............................ AAGCAAAACCAAGTATTTTTTATCACTAAATC 23945 28 100.0 32 ............................ TCTACGAGAGAACGCCACACACTAAGCAACCC 24005 28 100.0 32 ............................ GTGAGGAACTGGGCCAGTCAAGGTGATGGACC 24065 28 100.0 32 ............................ ACAAAGCGCTTATCCAGTGTGCCCGTGTTGCT 24125 28 100.0 32 ............................ CACACCCGTTAGCAACCAATCAGTATTGCAGC 24185 28 100.0 32 ............................ CAACGGTACGCTGATATTTAAATGGAATGAAG 24245 28 100.0 32 ............................ CAATAGCGGACGTGCTGATTCATTAGGGCGTC 24305 28 100.0 32 ............................ ATTCGTGCGCCGCTTAGCATTCATCGATAAAA 24365 28 100.0 32 ............................ CAATAGCGGACGTGCTGATTCATTAGGGCGTC 24425 28 100.0 32 ............................ ATTCGTGCGCCGCTTAGCATTCATCGATAAAA 24485 28 100.0 32 ............................ ACTTTAACCACAGCCACAGAAACAAACGCACA 24545 28 100.0 32 ............................ TATGCGAGCTGGGCGGTATTACCAGCATGGAA 24605 28 100.0 32 ............................ GCGAGCTGGCAATCGCACGCATACAGCTTGCT 24665 28 100.0 32 ............................ AAGTGTTTGCTAAAGTAATCCGTCTTAGCCTT 24725 28 100.0 32 ............................ GACGAGCCAGCCTACCATTGCACAGCGCAATA 24785 28 100.0 32 ............................ ATGAGGAAGGTGGGCTAGGCATGGGTGATGCT 24845 28 100.0 32 ............................ AGTGTCTTACAATGTTTATGGCACATTTTCAT 24905 28 100.0 32 ............................ ACAGCCTGCCCAAGTCTTGCCAGAGCCGAAAC 24965 28 100.0 32 ............................ CCATTCTGTGCCTAGCGTCTGCATCATGTGGC 25025 28 100.0 32 ............................ AGTCAGCCAGCCTTGCACCTCTAATAAATCAG 25085 28 100.0 32 ............................ GCCACAAACACAGCAAAGCAATAACGCACCAG 25145 28 100.0 32 ............................ TCGATACCTCACTCACTGGCGATCAGGTTAGA 25205 28 100.0 32 ............................ AATGGCCAATCAGCATCAATGTCGCTTGGTCA 25265 28 100.0 32 ............................ GATAGACTGGACGAAAAGAAGAGCGAGTTTAG 25325 28 100.0 32 ............................ AAAGTAGAAAACCATCGGCGGCCGCTTTGTAA 25385 28 100.0 32 ............................ TTGTAAGCCTTGCCATCGATTGCTTGATAAGT 25445 28 100.0 31 ............................ TCGTCAATGTCAGCTTGATTATCGAGATTGT 25504 28 100.0 32 ............................ ACCAGCTGAAGATACCGCCCAGCGGAGCGCAG 25564 28 100.0 32 ............................ CACGGGTTAGGTTTATCGCCCCATTGATTACC 25624 28 100.0 32 ............................ TGCTATCCACCGCCACGCTAAGCGGATTAAAT 25684 28 100.0 32 ............................ GCTGCATGATTGGTCATCGCATTACAGCGACG 25744 28 100.0 32 ............................ AATGGTACGCAAACAGTTAAATCAATACCTAC 25804 28 100.0 32 ............................ GTCTGCCTTGCGCCAAACTTCAACAAAGTAAC 25864 28 100.0 32 ............................ GTACGCTCGCTCTATGACTTGCTAGATGATAA 25924 28 100.0 32 ............................ CCAAGATGAAGCGGCATTGGCGTATTGAATAG 25984 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 53 28 100.0 32 CTTCACCACCGCATAGGTGGCTTAGAAA # Left flank : TGCATGTTAAAGGCATCAAAAAAGTGCCGACGGATAAAGTAACGAGCTATTTCAGCGTACATCGTTACCGCTTTAAACCTCTAGACGTGCAAGCGCAAACCTTGTCAGATAAGTTGAATATTAGTTATGACGAGGCAATGGCAACAGTCGCCAAACGCAAATCCGAGATGCCATTGCCTTTCATCCAAATGCACAGCCAAACCAATAACAGCAATTACGTATTGAAGGTTCTGCAGCAACCTTGTAGTGAGGCGACCGCAGGTAGCTTTAACAGTTATGGTATGAATGGCATGCGTGATACGGTTACTGTGCCACATTGGTAAGCGAATTAAATGGTAATGATGAATTACCCGAAGATTGGGAGTAAAAACCCTTTTTTGAGCTATTTAAAAACATGCAATGAAATCAAACAGTTACGATAGGGCAAAAAATGGAGGGTAAAATAGGGTATTTTGCCTTCTACGCCTTGTCGTAACTGATTTTTTAGAGGTACAATTCCT # Right flank : AACAACTGTAGTGGTCAACTAATTTAGGACACCTGATAAGAGGTTTTGATTAAAGTAACGTCTTTCTGTTTCAGCTGGTGTTAAATAATTGTTGAAAGTGTGCGGTCTCACGGTTTGATAGTAGCCCCAGATATAATCACTAATGGCACTTTTAGCCTCAGCGATATTCTCATAACCGCCCTTTGGCATCCACTCTGTTTTGAAGCTTCTAAAGAAGCGCTCAGTTGGGGCGTTATCCCAACAATTTCCACGACGGCTCATACTCTGTGTCATACCGTCGCAATCATCGATTGATTCAGCAAATTTCTTACTGGTGTAATGCGTGCCCTGATCTGAGTGAAATAACACACCACTTGGTTTGAGTCTCGTCTGATACGCCATTTTCAGAGCGTTACCTGTCAGAATACTATCGGGTGAGTCTGAGACACTAAAGCCCACCACACGACGGGCGTACAGGTCTAAAACAACGGCTAGGTAACACCAGCCGCCTTTAATGCGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCACCGCATAGGTGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACCATCGCATAGATGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 7791-6083 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXWA01000092.1 Psychrobacter sp. SHUES1 NODE_75_length_9076_cov_29.5315, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 7790 28 100.0 32 ............................ ATGATGAATATCCAGCCATGCACAGAACGACT 7730 28 100.0 32 ............................ AACCAAAAGTGATGCTGTCTTTAGTTTGGCTG 7670 28 100.0 32 ............................ GTTTGTTTGATGACAGCCAGTTAGATGACGCG 7610 28 100.0 32 ............................ ACCTCGCCAAGTAGCGGGGTTTTTTTGTGTAT 7550 28 100.0 32 ............................ TAACCAAAACGCAAGCAAGTGGCTTTAAGCGA 7490 28 100.0 32 ............................ TGAGACAGCAGAGGTCGCTAGAGCCAAGTTAA 7430 28 100.0 32 ............................ TACCACCCTAAAAGCAATGTTTATCGCGGCTG 7370 28 100.0 32 ............................ TACGAAGTGGTAGATAGTTTTGATAGCGAATA 7310 28 100.0 32 ............................ TAAAAACTGACAGTCGAAACAAGACACGAAGC 7250 28 100.0 32 ............................ CTATAAAGGACGGCTTAATATTTTTTTATTTT 7190 28 100.0 32 ............................ ACAAGTCCAAAATCAGTGGTCTGTTTTCGGTG 7130 28 100.0 32 ............................ CCAAGATGAAGCGGCATTGGCGTATTGAATAG 7070 28 100.0 32 ............................ ACAACCGCATCGCCAGTGTTTGTGTGCGTGTT 7010 28 100.0 32 ............................ CACAGACCAGCTTCAGATACTCTTCAGGCAGC 6950 28 100.0 32 ............................ CATAACATGCTTAATCTGCTCAGTCTGTGCAA 6890 28 100.0 32 ............................ TAGACCGTTTATGGGTATGAACGACGACGACA 6830 28 100.0 32 ............................ ATTAACCAAAACGCCAATGCAGCAAACAGGCG 6770 28 96.4 32 ...................A........ TTGGCTAATCCACTCGCCGCCTTTGTCCTTTC 6710 28 92.9 32 .....T.............A........ AAGATGATTAACAAAGGCTTGATGCTTGAAGA 6650 28 92.9 32 .....T.............A........ ACCTCTGCGTGTTGTTCTGCATCTAGTGCAAA 6590 28 92.9 32 .....T.............A........ AATAAAACCCCATCATACCGCCTAAAAGCCAA 6530 28 92.9 32 .....T.............A........ AACAGCCTTACGACCTTGCGCACGCTCTTCTG 6470 28 92.9 33 .....T.............A........ CTGCAAATACGCCTAAACGCTGGAACGGGTCGG 6409 28 92.9 32 .....T.............A........ TAGCGGCGTGAGTGAGCCATACGTCACTAAAG 6349 28 92.9 32 .....T.............A........ ATTAGCGCCTAAGTAAACACTGCAAGGCTCGT 6289 28 92.9 32 .....T.............A........ ATAAAACATCCTTTGTTAGTTGCTTACTGCAT 6229 28 92.9 32 .....T.............A........ TTATACATTCTGCTATTTTCACCTGCAAAACC 6169 27 96.4 32 ...................-........ GACTGGCTCGGTCTCCACCTTGGCGACCTTAT 6110 28 92.9 0 ........................T..T | ========== ====== ====== ====== ============================ ================================= ================== 29 28 97.3 32 CTTCACCACCGCATAGGTGGCTTAGAAA # Left flank : GTGTGCCATAGTAGTAGCTGCTTTTAATGATGCCAAATAAGTCACATAGTCGGCGTTTACTGACGCTTTTGTCTTGCTCTGCAAGCTTGCTTATCAGCGATAGCCGTTCAGGCTGTCCAAGGCCAGCAGAGCAGAAGCCTTTTTTAATATGTCGCGCTCCATAGTGAGTCGCTTAACCTGCTTACGCAATTCTTGTAGCTCGCGTTGTTCATCCGTTAAAGCGTTGCCGACTTTAGGTGCTTGGCCATTCGTTTCTTGTCGATACTGACTCAGCCATTTCTGCAGGGTGGATTTGCCAATGCCAAGTGAGCTTGCTACATCAGGTATTTTACGCTTATGCTCAGTTACTAAGCTGATGGCTTCAAGCTTGAATTCTCGGGTATATTGATTGCGATTGTTGGTCATACTAGTTTCCTTCTTTGGGTTATTATAACCTCTTAGAAGCTGTCCAATTTTATTATGCCACTACAAACCGCATCGCCAGTGTTTGTGTGCGTGTT # Right flank : TCTCGAAAATAGACTGATTAAGCACTACGCTTTTTACATAGAAGAAAATAATCAACATAAAAAAAACCAGACAGCCTAGGCCATCTGGTTATCAAATACTCTTAAATATCTATCTACTAACCGTAAGCTGTCCCCCAGAAAAACTGATGCATCCATCACAAAACCAAGATTTATGTTGTCTTGCATGGGGAATATCTGCTGGCACATCTAGTTGATAGGGACGACCGCAATACTCGCAATGTATGTCATCTAAATAAACCTGGCATTTTGCAAGCGTAGCAAACAACTCCTCAGACCTTATATTGTAATCGTAGCAAAGTATCTTTAGGTGATTGATATAGTCATTGGGTGATAAATACGACCAATATTCATAGCACAAACGCTTTGCTACATCATCTAGGCTTGAGTTGAACACAAAGTTAACACTCATGATATTCTCCTCGTTAGTAGCCATAACCAGACAGTGGTAGTAGCTCGTAAAGCTCGCTCTGTAGCTGAAT # Questionable array : NO Score: 6.09 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.97, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCACCGCATAGGTGGCTTAGAAA # Alternate repeat : CTTCATCACCGCATAGGTGACTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTTCACCATCGCATAGATGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //