Array 1 103195-106406 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEMT010000011.1 Acinetobacter baumannii strain MRSN11839 MRSN11839_contig00011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 103195 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 103255 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 103315 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 103375 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 103435 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 103495 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 103555 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 103615 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 103675 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 103735 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 103795 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 103855 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 103915 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 103975 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 104035 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 104095 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 104155 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 104215 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 104275 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 104335 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 104395 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 104455 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 104515 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 104575 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 104635 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 104695 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 104755 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 104815 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 104875 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 104935 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 104995 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 105055 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 105115 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 105175 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 105235 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 105295 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 105355 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 105416 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 105476 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 105536 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 105596 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 105656 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 105716 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 105776 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 105836 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 105897 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 105957 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 106017 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 106077 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 106137 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 106197 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 106257 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 106317 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 106377 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //