Array 1 38961-39787 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIXF01000003.1 Bacillus thuringiensis strain FCC7 HEMHAIPA_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 38961 32 96.9 34 .......C........................ GCACCAGAGGGATATTTAATTAATGAAGAAACAT 39027 32 93.8 33 .......C.C...................... ACTTACTTTAGCGCAACTAGAGCATATTCATTT 39092 31 87.5 34 .......C.C.A.....-.............. CCGCACCCTGCGAAACAATAACAGTTGTTGTCTG T,T [39103,39105] 39159 32 87.5 34 .......C.C.A........T........... ATCATGTCAAAGGCCATTTGCACCCATTGAGGTA 39225 32 90.6 34 .......C.C............A......... GAAAAAACGCTTGATGACTTAATGCGTGATGAAG 39291 32 93.8 32 .......C................G....... CACATTAAGAATTTTGGTACAAAGATTGTAAA 39355 32 93.8 33 .......C.......................C CATTGGTTTATCAGGAGTCATTGGCTTATCTTT 39420 31 84.4 36 T.G....-C..........T............ ATCATTTGAGTGCGATCTATTTCAACAGCATTTAAA 39487 32 100.0 36 ................................ ACAATTCCTCGTGGTATGAACCCTGCAGATGTTAAA 39555 32 100.0 36 ................................ ACAATTCCTCGTGGTATGAACCCTGCAGATGTTAAA 39623 32 93.8 35 .......C.C...................... TCAGACGGCTTGTCTTTTTCCGTAGGCTTATCTTT 39690 32 90.6 33 .......C...AG................... GGATCAGTAAACGGCAATGAAAAACCCGCCGTC 39755 32 90.6 0 .......C.............CA......... | T [39786] ========== ====== ====== ====== ================================ ==================================== ================== 13 32 92.6 34 GTCGCACTTTATATAGGTGCGTGGATTGAAAT # Left flank : TATTTATTGTTGTCAGCAAAAAAGCTCCAGTATAAAGTGGAAAATAAATGTAGTATAAGAGATACTGTAAAAGAAATAGAGATATTCCATTCTAAAATTTTAAAATTATTAACTTTTAAAAGAAAAAATAGAGCAAGGAAACACACAATAAAGTAAATAAGTAGATTGAAAGAACAGGGTAGTAAAAATATTATAAATAATAACTTAATATATAGACTATTATGAAAAAAACATTCATTTATTTATCAGTTAGGTAATGGCTGTTAAAATAAAGTTGAATATATAGATATAAAAGAATGGATTGATTTAGAAAGCCCTTTAATTTTTTAGGTGTGAATGTATAGCAAACATAAAATTCCTATTACATTCGTATCTAGAATTCTCATACTTTATGATGGGGATTTATGATTTTTTATACAAATTCCTTTATTGAATAAAAACATTTGTATATTTTTGGATAAAACTAACGTATTTGTGGTTGATTTCGAATACAAATCGGG # Right flank : TAGTAATGCTCTGGCTTTAAAACGCTCTGCAGTTTAGTAGATACTCAACTGGAAGTATCTACATCTGCAGTATCTAACAAACATGTAAAAAATATAAAATGGAGGGAGATTGAATGACGTACATTGCTCATATACGCGAGAGTGACAGTCAAGTACAAACAGTCGAAGAACATTTATTAGGAGTAAAAGAACTAGCTGAAACCTATGGAGAAAAAATTGGTATAAAACATTTAGCTGGTTTAGCCGGTATGCTCCATGATATGGGTAAATACACCAATGAGTTTAAAGAATATATATTGGAAGCAGTAAATAATCCTAATTCTCCACCTAAAAGGGGGAGTGTTGACCATTCAACTGCAGGGGGGAAATTGTTATATCAATTATTCCATACAGAAAATATGATTCCTTACAAAGGGATAATATCTGAGATAGTGGGAAATGCCATTATATCTCACCACGGATACCTTCAAGATTTTTTAAATCCAGATTTAGAATCGCCC # Questionable array : NO Score: 8.53 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTTTATATAGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 46071-46435 **** Predicted by CRISPRDetect 2.4 *** >NZ_VIXF01000003.1 Bacillus thuringiensis strain FCC7 HEMHAIPA_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 46071 32 78.1 34 ......T..CT.GC....T..T.......... AACCAATCGAATATAAACGTGGGAAACCGAAAAT 46137 32 93.8 33 ...................T.T.......... CTTAAAGAATACTATGAAATTGAAAGAAGTACA TG [46160] 46204 32 96.9 35 .....................T.......... TTAGATTATTTCAATGCAAAAATAGAAGTAAACAA 46271 32 96.9 35 ..................T............. ACTTCTCTATGAATCCAAGAAGCAGCACGGTCTAT 46338 32 100.0 34 ................................ AGTAATGATGTGGAGCAAGAAGGAATCAGTTTAT 46404 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 6 32 94.3 34 GTCGCACCTTATATAGGTGCGAGGATTGAAAT # Left flank : TGATCCGATTGATATTACTAGTATGCAGATTACGAAAAGTGTAAATTCTGAGCCTGGGAAAGATAAAGGTTCAGATACGATGGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGAAGTATTAATACGCAATTAGCAGAAAAGACAGGTTTTACTAACGAAGATGCGGAGAAGATTAAAAATGCACTGGTTACATTGTTTGAAAATGATGCGTCGGCAGCACGTCCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGGGATCATAATTCAAAACTTGGTCAATACTCTTCTGCAAAAGTACATCGTTTATTAGAGGTTAAACGGAATATTGACGAACCAAAAACAATCGATGATTATACTGTATTGGTACATGAATTAGATGATTTAAAAGTTGAGGTTATTAATGGAATGTAATAAAAAGCGTCAGAATAGTTGAACGAAAGTATCCTTGTAAAGATATACTCTATCAATTTATTAAAGGAAA # Right flank : TCCGTTAACGAAAATATAAAAAGCATACGTGCCGGTCGTACCTCAAATAGGCGCGAGAGTTAGGGCTGGTAATATGCTTGATAGTAATTTAGTATCTCTGCTGGAGTAAGAGGAACTGCTTCAATTCATACAGAAACTAGTGTTGATCCAATTGACATTACTAGTATGCAGATTACGAAAAGTATAAATTCTGATCCTGAGAAGGATAAAGTTTCACATACGATGGGGATGAAGCATGATGTTGATCTTGGAGCTTATATTTTTTATGAAAGTATTCATATGCAATGAGAAAGGAATACAGATTTTACTAAAGGGGATGCGAAAAAGATTAAAAATGAACTGGTTACATTGTTTGGAAATGATGGGTCAGCAGCACGCCCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGGAAACATAATTCAAAACTTGGCCAGTACTCTTTCGCAAAAGTACACCGTTTATCGGATAATAAGCGAAACATTGACGAACCAAA # Questionable array : NO Score: 8.66 # Score Detail : 1:0, 2:3, 3:3, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTTATATAGGTGCGAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACCTTATATAGGTGCGAGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //