Array 1 75930-74161 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNW010000022.1 Acinetobacter bereziniae strain ACIN00226 ACIN00226_c0022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 75929 28 100.0 32 ............................ GATCATAGGGATATATGGCGTGATCATTGCGT 75869 28 100.0 32 ............................ ATCAATATTGGCGTAGATGTGACGCACGTCTT 75809 28 100.0 32 ............................ AGTGTAATGCGTTGGAACGGATTCAAAAGGAT 75749 28 100.0 32 ............................ ATTTGTTGCTTGGTTATTGCGAGTTGCTCAAG 75689 28 100.0 32 ............................ GATATCATGACTTTTTTTAAAAAAATCTTGCG 75629 28 100.0 32 ............................ GATTTGACATGCTGTTCCCCTGAATTTAAAAA 75569 28 100.0 32 ............................ TTGAGGGTCATTCTATGAAAGCTCTTGATCAT 75509 28 100.0 32 ............................ TTAAAAATTTGATAAGAGAAAAAAGACAGTGT 75449 28 100.0 32 ............................ AGACTTAGAAAAATCGGGGGTGGCTGTCTTAG 75389 28 100.0 32 ............................ TTGTAGCTCCAAAACTGTTCGTTTCATGACAA 75329 28 100.0 32 ............................ TTTATAAAGTGATTTTGGTTCTGCTGGCTGAT 75269 28 100.0 33 ............................ AACCCAAGTAAGTGCAGAAGGACCAAGTTTTAC 75208 28 100.0 32 ............................ ATTCAACGATCAACAAAAGTTGCATGGATTCG 75148 28 100.0 32 ............................ TGAATGTAATATGTATACATGTTCAAAGCAGG 75088 28 100.0 32 ............................ ATTTTCTGGTCGGGAAAACGGCATTTTAATAA 75028 28 100.0 32 ............................ AATCTAATCAGAATTTGATTCAAGAATGAAAC 74968 28 100.0 32 ............................ TTTCTCAAATCTTGTTCTGCTCTGCTCAATCG 74908 28 100.0 32 ............................ TTCATCCGTGCATATGTCTGAGGGGCTTCACC 74848 28 100.0 32 ............................ AACACCTAAATCTATTTGCTCTGGGTCTAATT 74788 28 100.0 32 ............................ AAAACTTGCAGTTGCACATCTGCTTTAGCCGC 74728 28 100.0 32 ............................ AATAATATGACTGAGTAATTGAAGCGGATATG 74668 28 100.0 32 ............................ TTGTTATAATAATAAGCAACGCAAAAGCCCAT 74608 28 100.0 32 ............................ ATTTTCAAAATTTAATGTCGCCGTTTTGGTCG 74548 28 100.0 32 ............................ TTGTACAGCTTGTGATTCATCACTATTTCCAC 74488 28 100.0 32 ............................ AGTATGATTTTGAACACCTTGTTCTGATAATT 74428 28 78.6 32 .C...C.G...T.....C.......G.. TATACGTCATGATATTGAGCAAATATTACTCA 74368 28 92.9 32 .....C...................C.. TTGCAAAAGCAGCTTTGGCTAGTGCAATGGAA 74308 28 85.7 32 .....C.G..A......C.......... ATATTATTTTTAGGGGAATAACAATGAATGAA 74248 28 89.3 32 .....C.....T............A... ACTACGAGCTGATAAGGGGATAGACATATCAC 74188 28 75.0 0 .....C.....T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 30 28 97.4 32 GTTCATTACCGCATAGGTAGCTTAGAAA # Left flank : TCAAAGTGGCTAGAAAGATTGGTAGACTATGTTCATATCACTCAACCACGAGAAGTTCCAAAAACAAAAATCACTGGATATGCCCATTATTTCCGAATTAATCCAAAAATGACTTTGGAGGAACGTATTGCTCATCAGGCTCAACGACGAAGCATTTCTTTTGATGAAGCTCAACAACATTTTAAGCAATATAGTGAACAACCTGAAATTGTTCCCTATGTCAGTTTAAAAAGTTTAAGTACTAAACGTGAACAAAATATAGATCGATATTATCGGTTATATATTGGGAAATCTGTTGCTGAAGAAGCAAATGATGGAAAATTTGGAACATATGGTCTCAGTAGAACAGCAACAGTCCCCGAATTTTAACCCAATATTTTTCCACTCTTTAACAACTTAATAAAATCAATAAGTTATAACAGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTAATCTAAAATTATA # Right flank : TATAAACGCCTTAACATCTTAGCTAAATTTAGGAAAGTACAAACATATGGAATAATTTTTACAGTAAATAAAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAATACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTACCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACAC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.00,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 6878-8109 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNW010000057.1 Acinetobacter bereziniae strain ACIN00226 ACIN00226_c0057, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6878 28 100.0 32 ............................ AAAGATCGTACCGAAAAAGTTATGTTCTGCAC 6938 28 100.0 32 ............................ AAGTTTCAATTGCATCACCAACACCCAAGTCT 6998 28 100.0 33 ............................ AAAGCAATCTGCCCTTGGTCAGATACGATCTTC 7059 28 100.0 32 ............................ ACCTGTTGAGGGAGCTTCTTTTCTTTTAACAA 7119 28 100.0 33 ............................ AGTTCAAATTGCAAACAATCAAGTAGAATCTCA 7180 28 100.0 32 ............................ CAAGACTTCAAGAATGGGTTAAAGGTCTTTTA 7240 28 96.4 32 ...............A............ AAAAGGCTAAAAGCAAATGAGCGTAGATAGTA 7300 28 100.0 32 ............................ AGTGGCTCAATTGGTTGCTTTGGATTTTACAG 7360 28 100.0 33 ............................ AATTAAGCTTCTGTGGGATTGATACAGATACAA 7421 28 100.0 32 ............................ ATTGCGTACATGTGTTTGTCGCTTGATCGACA 7481 28 100.0 33 ............................ ATGTACACCCTTACAATCTCGGGTGAAAATACA 7542 28 100.0 32 ............................ AAAGACTACAAACCAAGCTGCAGACAATCACA 7602 28 100.0 32 ............................ ATAGCTGTATGAGATGTAGGTAATCTTTCCCA 7662 28 100.0 32 ............................ AAGCGTTTGCAATGTCGTTTGCCATATCCTCA 7722 28 100.0 32 ............................ TGTAGGTGCAGAATATAACCCTGCGCCTGTTC 7782 28 100.0 32 ............................ AACAACGGCAGAATTAGAGGGTACAGCTTTAT 7842 28 100.0 32 ............................ TTTTGGAGTTGTAACGTCGGGAACAATACTGC 7902 28 100.0 32 ............................ AGAAGCACAGGCAATGTATATCAAAGCGCGAG 7962 28 92.9 32 ..................C.T....... TTTCAATAAATAACAACGATCAAAACAATAAA 8022 28 100.0 32 ............................ ATTCATGGCATCGGTTGAAGTTTCAGATACAT 8082 28 96.4 0 .............G.............. | ========== ====== ====== ====== ============================ ================================= ================== 21 28 99.3 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATGTAATAAGGGATTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : AAAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGACAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTAGCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCGCGATCATTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGCATTCACTACCGTATAGGTAGCTTAGAAACCTTACCAAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [86.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 89476-91066 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNW010000007.1 Acinetobacter bereziniae strain ACIN00226 ACIN00226_c0007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 89476 28 100.0 32 ............................ AGTACCGTGTGAATGCGAGTTTGAATTCTTTA 89536 28 100.0 32 ............................ TTTAGTTAAAAATAATTTAGATGAATTTTGAG 89596 28 100.0 33 ............................ TTTTTAAAAGGTTAAGATGTACGAAATTAACTT 89657 28 100.0 32 ............................ TTTATTCATTCCGTTCTCAGGTGTGAATTCGC 89717 28 100.0 32 ............................ ATCCAGCTCGATGTCGATTACAAATGTCGTGA 89777 28 100.0 32 ............................ GAAACATGAAACGTGGGTATAACAATGAAACC 89837 28 100.0 33 ............................ TCTTAATTAATACGGCTTAATAAAATTTCCCAA 89898 28 100.0 32 ............................ GCAGCGTGGACAGATGTCGGGGGTCAGTCTCC 89958 28 100.0 32 ............................ AACCAATGAAAACCCCGAGACAAATAGCAACG 90018 28 100.0 32 ............................ ACAGTATGGTTGAACTCGTTGGCTACGGTGAA 90078 28 100.0 32 ............................ GCTTGAAATCATCACCTCGCGAACGTTATCCG 90138 28 100.0 32 ............................ AACCCCGATTAAACGCCCCCATTCGATTAACG 90198 28 100.0 32 ............................ GTGACGGGTTAGAATCTTCGGTCTATCTGAGT 90258 28 100.0 32 ............................ GCCCTGAGATCGTAAAGTTAAACTAATATCCT 90318 28 100.0 32 ............................ TTAGCTGTATTGGACCAGTTAATTCCTGTTTG 90378 28 100.0 32 ............................ TGAAGGGTTTGTTTTTGTGCCGAAAGAATTGA 90438 28 100.0 32 ............................ TCAACGCACCCATGCGGTGTGGTACGGTCGAC 90498 28 100.0 33 ............................ TGTTTGTGTTCCAGTGTCAGGGTCAGTTTTATT 90559 28 100.0 32 ............................ GACAGTCCAGTTAATAAGACGAATATCAGACA 90619 28 100.0 32 ............................ ATTGTGCGGGGGTGGACCTTGTACTTAATTGA 90679 28 100.0 32 ............................ TTGAACGGTATAGATCGCAATAAATCCAGATT 90739 28 100.0 32 ............................ TTGCCAGTCCCAACGAATTAGATAATTCCAAT 90799 28 100.0 32 ............................ TCAACAGGTAGGCTAGAGATCGTTGCACTATC 90859 28 100.0 32 ............................ TACAACCAAGCATGTCGCTATCACATTGGCAA 90919 28 100.0 32 ............................ TGGAGCATGAGCCGAGAGAAATTGACACAGAA 90979 28 100.0 32 ............................ TATAGTATATAAAAAATTCTATTACCCCAAAT 91039 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCTAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTGGTATAAATTGTTTATTTTATAGCAATAAAAAAGCCCACTTGAATCAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //