Array 1 1543298-1541318 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP010432.1 Lactobacillus acidophilus strain FSI4 isolate Yogurt chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 1543297 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 1543236 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 1543175 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 1543114 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 1543053 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 1542992 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 1542931 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 1542870 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 1542809 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 1542748 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 1542687 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 1542626 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 1542565 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 1542504 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 1542443 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 1542382 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 1542320 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 1542259 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1542198 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1542137 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 1542076 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 1542015 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 1541954 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 1541893 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 1541832 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 1541771 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1541710 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 1541649 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 1541588 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 1541527 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 1541466 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 1541405 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 1541344 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //