Array 1 1574823-1574066 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBBP010000001.1 Clostridium botulinum strain KM124 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1574822 30 93.3 36 ................AT............ GTGGCAACTCTTCCTCAATATTTGTTTTTGCTTCGA 1574756 30 93.3 36 ................AT............ TGTTGATTGATTTAGCGGACGAGTTGGGGGACGATA 1574690 30 100.0 37 .............................. GCAGCGTGTGCTGGAATACTTAATGTAGCTGGAACAG 1574623 30 100.0 36 .............................. TATAGAAGCTTTTAAAAATTCTACTAGTAAAGCTGT 1574557 30 100.0 35 .............................. GAAGGTTTTAAATTATTTTCAAGTGCTTTACGATT 1574492 30 100.0 36 .............................. TCAAACACTTGGAGTTTTTACAGATACTATAATAAT 1574426 30 100.0 37 .............................. TAAAGTTACTTCTTGTAAATTTAAGCAACATAAATAC 1574359 30 100.0 36 .............................. ACAAGTCTATAAAGTAATAATTCTTTTGGTTTTCCT 1574293 30 100.0 36 .............................. TCATATTGATTAATTCATTCCTGCTATACCCTGTTT 1574227 30 100.0 35 .............................. TCTATAAAAGTTTCAAATTTAGACTCTATACCTCT 1574162 30 100.0 37 .............................. ATCCTAAGTATAGTAGTATAGTCCCCTCTCTAAACAG 1574095 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 12 30 98.9 36 GATTAACATTAACATGGGATGTATTTAAAT # Left flank : AGACAGTGCAGAAGATATATTTAATAAAGTTAATGATTATATTTTAGACGGAATGCCATGCGATAGAGTAAATGAAATTATAAATAGCAATGAAAATTGTGTGAAATGGACTAGAAGAATTTGTGTACATAAAGAAATTTGGGATAAAGAAAGTGGAGATGTAGAGTACTTTTATTTCCTAAGGAGTTTATGGATTAAAGCTTTTGTAAATGAAATAAATACTGAATTTGATTATTTAGAAGACAGTAAAGGGGTAAAATCTATAAGAAGAAAATAAAGATTTTTATAAAAATATACATTTGTAATTTAAGACAAGCTTTATTATTTTACCAGGCAATTATTTTAATGAAATCCTATTAAACCTAGATAAATACAAGGATTATATATAATAGAATAGGTTGTTATCAATATTATAAAATCACTTGGTAAAATAGTAATAATATGTTACTATTACTGTATTAGAGCGATTTTATTATTTTAAGAATGGCTTATTTTCAATG # Right flank : CCATAATATACTGGTGTTGTTATGAAGAATAAGCCTAACCTAAATTTTAGATTGGGCTAAATATTACTAAATAGAATAAAACATTAATTAAAAATATTTTTATCAAACATTTCTATAAAATTACATGAAATATTTGATAGAGGTTTATTTTTAGGCCATATTAATCTTAGATATGACTCAATTGATGGTTCTATTATCTTTTTTATCTTTAGATTAACATTGGGTAAGATATTAGAAGCAGTAAGTGGTAAAATAGAAATTCCAATTCCAGCTTCAGCCCAACTTAAAGAGGTAATAATATCATCATTCTTACATATTATATGTGGTTCAAAGCCTGCCTTATTACAAGCATTTTTTATAACATCATCGTATCTTCTATTAATTATTAATGGCTTATCTTTTAATTCGTTAATGAGAATAGTGTTACTTTCTATAGAATTATAGAATTTAGATTTTGCAATTGTAACAAAATAGTCATTTAAATTATTTTCAAGGTTATC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.10,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 2 1707188-1706959 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBBP010000001.1 Clostridium botulinum strain KM124 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== =================================== ================== 1707187 31 100.0 35 ............................... TAATAGTATGTCCATATTGATTTAATATATCCCTC 1707121 31 100.0 35 ............................... TAGTAAGAATTTAGGTTGGCAAATGAATAAGGTAA 1707055 31 100.0 34 ............................... GAGCAATTCCTAAATGTTTAGGTCTTAGTATACT 1706990 31 87.1 0 .......T.........T.....G.....G. | G [1706963] ========== ====== ====== ====== =============================== =================================== ================== 4 31 96.8 35 GTTTAACCTTAACATGAGATGTATTTAAATA # Left flank : AAGGCAGAGAAGAAGGAGAAAAAATTAAGGCGCTAGAAATAGCAAAAAATTTACTAGATATCTTAGATAATAAAACAATAGCAATAAAAACTGGATTAACAGAAGAAGAAATAGATGCTCTTAGAAAAAAAGAAGTTAATTAGTGTTTTTTAAAAACATTTAAGATTTAGTTATCCTTGACAAAGTATCCCATTTAAAGAGTTATAATGATTTTTTTAATTGTTATAGCTCTTTATTTTTCTCCGAAAAATAAAGAGATTAAGCTCAAATTTACTTTAAGAATTGTAAAAATAAAGTAAGTTAGCTATAATATTAAGCATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACAGCGCTAAAGTGACCTTTTAAAAATTTTCTGAAAATTTTATAAATGGCTGGGAAAGTTTCATTGAAACCTTGAAGTTTCAATGCCTTAATGGTATTATTGATTTTAGAGAATGAGGATTTTACTATG # Right flank : AAAGGGCATGCTAATAACTAATAGAATGGCTGCAATGATTGGTTCATTGCAAGAATAAATATTAAAATGTATTATTGAAATTGTTTATATATAATGGGGGAAAAAAATGACTGAAATGCAAATGTGGAATGAATATATTAAAATTAATACTAATGCAAAAGAGTATCAATCATGGTCATTTGGTGGAAATACACCTAAAATGCCAAATTTGTTGGCTGAATTAGTATTAAAGGGGATTAAAACTGCAACTGCTAGTGCATATCCTTGTTATATTTCAGAAAATGCTCCATTACCACCAGTTGGAGGATATAATTTGATATTAAATACAAAAGGTGAGGCTATTTGTATAATAGAAACTACAAAAGTATATACAATACCATTTAACCAAGTTAAGGAGGAGCATGCGTATAAAGAAGGTGAATTTGATCGTACGCTTATATCTTGGAGAAAATGTCATTCTAAATTTTTTTCTATGGAATTAAAAGAGATTGGTCAAGAAT # Questionable array : NO Score: 5.70 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTTAAATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:77.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 3 1711172-1710883 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACBBP010000001.1 Clostridium botulinum strain KM124 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 1711171 30 100.0 34 .............................. TCATCACATACGTTAAATATATTTTTAACTACCT 1711107 30 100.0 35 .............................. ACTTTAGTTCTAAATGTTTCGCTTGTTTTGTAGAA 1711042 30 100.0 35 .............................. GCTAATGAGATTCCAAGAGTTAACGATACATCTAA 1710977 30 100.0 35 .............................. ACTTATTTGTATGCCTTTATTTGGGATTGTAGATT 1710912 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =================================== ================== 5 30 100.0 35 GATTAACCTTAACATGGGATGTATTTAAAT # Left flank : GTCGGTAGAGCACATGACTTTTAATCATGGTGTCCCGGGTTCGATTCCCGGGTGAGCCACCAAAATATTGTCCAAAGTAGAAATGTGAGTTTTTACTTTGGATTTTTTTTATTTTAGAAGAATAAAATAAAATACAATATTGATTAGATATTTTAGATAATAAAACAATAGCAATAAAAATGGGATTAACAGAAGAAATAGATGCTCTTAGAAAAAAGAAGGTAATTAGTATTTTTTAGAAACACTTAGAATTTAATTATCTTAGTTTTTTTTCTGTACAATTCTATTAAAGTGTATAATTTAAATAGAATAGTAAATATTCTATTTTACCAGCCATAAATTTATATAAAATCCCTTAATCCATTGAAATTACTGGGCTAAGGTTGCCATTGAAAATTTTTATTGAAATTTCACAAACGGTTGGTAAAGTTTCCTTGAAACCTTGAAGTTTCAATGCCTTAGTGGTATTATTGATTTAAGAGAATGGCTATTTTACTGTG # Right flank : AGAGCATTAGATAGTATTTTTATTGCCTTTGGAGAAGGCTTAACATTAAAACATCCTTATAGCTATAACTTAGTTTTGTAGCTATAAGGATGTTTTTTTACTCTTAATAATGTAACAAAATATGTTATACTTGAAAAAAACAAATTGTAATTTGCATGGGAGAATACAAAAATGAGCAAATTGACTAAATATATTGAAGATTTAAGAAAAAAGTATGGGGATGCAATAGTAACAAAAGAAAGTCATTATGATGATATGATGCTTTTAAAGGTACCTGAGCCATTGAGGGAATTTTATAGGGAATATGAAAGTTTAGAAATGCCTTTTGGAATTATTGACTCTATCGAAATCAGTATAAGATCTTCAGAAGCAGAACCCTTTAAAAGTGAAGGCTGGTTTTCATTTGGTGCAGATAGATATTTTTCCTTCTGGCTATGTGCTTATAAGGAAGATAATTATGGTAATTCCATTATTTCATGGGATCACGATATAGATGATGA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACCTTAACATGGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //