Array 1 3-208 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLI010000063.1 Yersinia wautersii strain WP-931205, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3 27 78.6 32 C...-.GAT.T................. ACAGGCCCCCGTACTGGTCCCGGCATTGGGAA 62 28 100.0 32 ............................ AAAATGCGGGTAACGCTGCCCGAGGCCCAACC 122 28 100.0 32 ............................ AGACCGCGCCGCTGCTGGGCTGTTGCTGTTTG 182 27 82.1 0 .................-..A.CG...G | ========== ====== ====== ====== ============================ ================================ ================== 4 28 90.2 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CTC # Right flank : AG # Questionable array : NO Score: 5.37 # Score Detail : 1:0, 2:3, 3:0, 4:0.51, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [1.7-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 12-219 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLI010000067.1 Yersinia wautersii strain WP-931205, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 12 28 96.4 32 ...........T................ GTGAAGGAATAACGCCCCTGCATGTTTATATG 72 28 100.0 32 ............................ TGAAGCCGCTGGGCGCGTTGTACAGCTAGTCG 132 28 100.0 32 ............................ GCTTCTGTTCTGCATCGCGCCGTGTTGCCTCC 192 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AAGAAGATGCTG # Right flank : TACCGAATAGCCTTGGCGTAACGCCTC # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [11.7-20.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0.41 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 216-8 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLI010000830.1 Yersinia wautersii strain WP-931205, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 215 28 100.0 32 ............................ AACTCAAGGGGGCGGTGGGGGATCAACCATAC 155 28 100.0 32 ............................ GGACCACACAGCAGAAGAATGGCGCAAATTTA 95 28 100.0 32 ............................ AAAAACACATCGTTTGAAAATCTTGTCTGAAT 35 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 4 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCACAGGCAGCTTAGAAATTAACCTGATTGCCTCATCATTAAGTCGCTC # Right flank : AACCGGAG # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [1.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 273-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_CBLI010000796.1 Yersinia wautersii strain WP-931205, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 272 28 100.0 32 ............................ AGCGGACGTATCAATATTCCAATCATTGTCTT 212 28 100.0 33 ............................ AGTTGGCGGAGTTGGGGGCGTTGGGATTTTAAA 151 28 100.0 32 ............................ TTTGGCGCTGAAGTTACCGTATTATCAGTTGC 91 28 100.0 33 ............................ AAATAGCTGAGCAGTATTCAGTTAATTTATACA 30 28 85.7 0 ....................A.CG...G | ========== ====== ====== ====== ============================ ================================= ================== 5 28 97.1 33 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AACCGCAAACGGCTCTTGGGAGTGGAAATAC # Right flank : GAG # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,9] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //