Array 1 208187-203439 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAQQO010000005.1 Aeromonas veronii strain NK01 scaffold_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 208186 29 100.0 32 ............................. GCATGCTCGCGGGCCTTCTCACGCGCCCGCTG 208125 29 100.0 32 ............................. TGCAGGGCGTGACTGTCGGCGGTATGCAGGGG 208064 29 100.0 32 ............................. CAGCAGCGCCAAATCGAGTTCTATCAATCCGC 208003 29 100.0 32 ............................. CGAGATGCTGATATGATTTTAAGCGTAAGGAT 207942 29 100.0 32 ............................. CTGACGAACTCCCACTCGCTGAGGCCGGATAC 207881 29 100.0 32 ............................. GCTTTGCTGGCCTAAACACCGTTGTTCAGACT 207820 29 100.0 32 ............................. ATCCATTTCATAAAAAAAAGGCGGGTTTCCCC 207759 29 100.0 32 ............................. GGCGTAGACTGGGGCAAGCTGACAGGAGGGGC 207698 29 100.0 33 ............................. CCCACTTGCCCGCGGTCGGGGCGATCTGGATAC 207636 29 100.0 32 ............................. CCCTCACGCCAGCCGAAAAACAGGCCCGTTAC 207575 29 100.0 32 ............................. CAACTATTTGAAAGCCTGCTAGGCGAAGAAAT 207514 29 100.0 32 ............................. ATGTTCGCGTACATCAACCCCATGGCGCGGGC 207453 29 100.0 32 ............................. GGTATGTTGGGGTGGTGTAGTCAATCACTAAA 207392 29 100.0 33 ............................. TCGTTATGTCTAGTCGTGGTGGTGCTCGTGATG 207330 29 100.0 32 ............................. GGCTCCACCTTGGCCTGCATCGCCGACGTTCA 207269 29 100.0 32 ............................. AGTGTGGGCGCCGTGGCTTAAGACTGGGCTCG 207208 29 100.0 32 ............................. CAAGGTAATTGGATCGTACTGGTTTGCCACAA 207147 29 100.0 32 ............................. GTATTTAAATGGCCACATCGCGTGGCCATTGT 207086 29 100.0 32 ............................. CTCTAGTGATTTTCCCGAGGGAGTGCAACTCC 207025 29 100.0 32 ............................. GCCATCATCGCATCGCTTAACGAGTTGCGTGG 206964 29 100.0 32 ............................. ATCGAGGGCTGATAAATGGCTAAGGGTCGTTT 206903 29 100.0 32 ............................. CCGACCTTCGATGCCGAGGGCCGGTGCAACTT 206842 29 100.0 32 ............................. CAGCCATCATCTGACGGAACAGTGAAAATCTC 206781 29 100.0 32 ............................. GCCACAGCGACAGCTGCGGGGGCAAACTTAAC 206720 29 100.0 32 ............................. CTAACTTTCCAGCATTGATGGATATGGCCCGC 206659 29 100.0 32 ............................. AATACGCCGCCAAGATCAGCGGCAAGCTGATC 206598 29 100.0 33 ............................. GTCATCAGCCAGGCGGCGGCCTTCTTCTGCTGC 206536 29 100.0 32 ............................. TACGCTGCTCCGGTAGCTGTTGTTACCTCCGC 206475 29 100.0 33 ............................. CGGTGGCGGTTGCGGGCGTCGTAGATCTCTGAC 206413 29 100.0 32 ............................. CCGAGGGCGTTGATGATGAGCTCACGGCGACC 206352 29 93.1 32 ............C...C............ CCATCCTTGGCCATGCTCTGGCACAGGCGCGC 206291 29 93.1 32 ............C...C............ GTGTGGTATCTGGCCACTGCTGGCGCGATCAC 206230 29 93.1 32 ............C...C............ AAACCAGATCATCATTGGCATCTGCATCGACC 206169 29 93.1 32 ............C...C............ TTGCTGGAGGTTGGCTCATGCAGCGCCCCCTT 206108 29 93.1 32 ............C...C............ TCTATCACCGGATTGATAGTCGATGAGATGGC 206047 29 93.1 32 ............C...C............ TAGAATCAGCGGCATAGGTATAAACCATTTGC 205986 29 96.6 32 ............C................ TGACAGTCGCGGATGACACGATCCGGTGTTGA 205925 29 96.6 32 ............C................ ATGGTGAATTACGTCAAAGCCAACAAGCCTTG 205864 29 79.3 40 ............C.........C.TGGG. ATGAACCGAGGTATGCCGGGTAAAAGCCGTCGCTCGGGAT 205795 29 93.1 32 ............C...C............ GACGAAACAGACCCGGCAAAGGCTGGGCGTGA 205734 29 93.1 33 ............C...C............ AGCGGGGCAGGGGTCAATTACAACCTGTCCAAC 205672 29 93.1 32 ............C...C............ GCCAACAACCGGGGCTATGCCTACACCATCAC 205611 29 89.7 32 ...T......T.C................ TGGTGGGTGATCGACATCGGCGGCAACAACCT 205550 29 89.7 32 ..........T.C...C............ TATTTGGGGTCATACTGACGAATGCCGCCTGT 205489 29 96.6 32 ............C................ GGGGGTGTTACAGCGGAAAGGCCCGCCGCTGA 205428 29 93.1 33 ............C...C............ TACAATAAGCCATCAACGAGAGGTGCATTATGG 205366 29 93.1 32 ............C...C............ GACTGGCGGGATGCCATGAAGGCCGAATGTGA 205305 29 86.2 32 ...T...T....C...C............ CTACAAGGCCGTGACTGAGCAAATGGGGATGC 205244 29 82.8 33 ...T...T....C...C...........T GACGCCATGGGCGAGCTCGAAGGTGCTGCCTCT 205182 29 86.2 32 ...T...T....C...C............ ACCTTGTCCCAGTGCTGGGTAGTCATCTCGTC 205121 29 89.7 32 .......T....C...C............ GCCCCTTGTTCAATTCTGGTCAGTGGTTCACG 205060 29 96.6 32 ............C................ TCCTGCAGTTCTGGCGAGGCCAGCGCGGCGAT 204999 29 100.0 33 ............................. TGATGGTGCGCGTTCAGCTTTAGGAATGGCGAC 204937 29 100.0 32 ............................. GTTGATGTAACAGGCGATGTTTCGGTCTTGAA 204876 29 100.0 32 ............................. AATGCGGCATCGCTCACCTCTGACCGTTCTGC 204815 29 93.1 32 ............CT............... CTGGTGGTCATTTTCTGGTAGTGTTCATAGGG 204754 29 93.1 32 .A..........C................ GTCATGCGCTCGGCCACATCGTAGAAACCGAG GGTGCACG [204736] 204685 29 93.1 32 .A..........C................ CGCCGGAATGGTTGTGGGTACGCAAGCTGCGC 204624 29 96.6 32 ............C................ GTGCGCGCCATCTGGATCACCATGTACAATGA 204563 29 96.6 32 ................C............ GCTCTCAGCGTTCTGAGGTAGGTAAACGCCTC 204502 29 86.2 32 .A.........ACC............... AAAAAACTCATTGAGCAGGTGCGCGATTACTT 204441 29 86.2 32 .A.........ACC............... GATCGTCTGGCAGCAAACACATGGAGGCAGTA 204380 29 86.2 32 .A.........ACC............... ATATTCGAGTCCCTGCTGAATACAGCAGCCCA 204319 29 82.8 32 .A.........ACCA.............. AAGCGGGTGCCATTCTGGGCAGAGGTCGGCTT 204258 29 93.1 32 ............C...C............ TTCAACAAGGCCAAGAAGGGCACCGATTCGTG 204197 29 93.1 32 ............C.G.............. AACAGCGATGATGTGCTCCAGCTGAGCATCAC 204136 29 89.7 32 ............CG..C............ TTGGAGGCCCTGCTGGTATGGCAGTATCGCCA 204075 29 89.7 32 ...T........C...C............ GCATGCTCGGTTAGCATGTCGAACCCTGCCTC 204014 29 89.7 32 ...T........C...C............ CCCGCGCCGCCGCCGCCGCAGAGAAAAAAGCC 203953 29 89.7 32 ...T........C...C............ GCCAACAACCGGGGCTATGCCTACACCATCAC 203892 29 89.7 32 ...T......T.C................ ATAAAAGACGCTCAGCAGGGAGGGGGTGGCTG 203831 29 89.7 32 ...T........C...C............ GGCAAGACGGGTCGCCGCCTGTTTGCCATCAA 203770 27 82.8 32 ...T........C..A--........... GACTGGCGGGATGCCATGAAGGCCGAATGTGA 203711 29 86.2 32 ...T...T....C...C............ GTGTGGCGGGTCTGGTAGAGGTGGCGATAGCG 203650 29 89.7 31 ............C...C...........A GTCTCTGCTGTGGCGTGGCGAGGCGCCATTG G [203623] 203589 29 86.2 32 ...T....T...C...C............ ACCCCGGTGATAGGCACTTGCGGGGATCTGGT 203528 29 82.8 32 ...TG.......C...........GT... ATAGGAGAGCCCTCCTGCGTGGCTACGTTAAA 203467 29 86.2 0 .A........T.CC............... | ========== ====== ====== ====== ============================= ======================================== ================== 78 29 94.4 32 CTGCTCCCCGCGTACGTGGGGATGAACCG # Left flank : CCGCTAATTGAAGAGGTGCTTGCTGCAGGGGGGAGCACCCCGCCTGAGCCTCCCAAGGATGCTCAGCCGCCCGCCATTCCCGAACCGATCGGCATGGGGGACGCCGGTCACAGGAGTCAGTGATGAGCATGTTGGTCGTCGTGACCGAAGATGTGCCCCCACGTTTGCGTGGTCGGCTGGCTATCTGGTTGCTGGAGGTCCGTGCAGGTGTGTATGTGGGAGATGTCTCGCGCCGTGCACGAGAGATGATCTGGCAGCAGTGTGAGGCATTGGTTGAGCAGGGCAATATCGTGATGGCATGGTCTGCTAACAACGACTCAGGGTTTGACTTTCAAACCTTGGGAGCAAATAGAAGGATGCCGGTGGACTTGGATGGCTGCCGGTTAGTCTCATTTCTACCCTTTGAAAATCAATAGGTTATCGTTCATTAACAATCTGGATTAGTTGGTGGCTTTTTTATGGTTTGAAAAAGCCATTTAAATCAATAACATCCATTAAGT # Right flank : TATGTAGATGTTGAGCTTGATCCCGCGCGGCGCCCTTCCCCACGCTCGTTGGGATGGAGACCAGCTACAACTCTAAGTGCTCAAATGTCTACCGGCTAATCAACGATGGCCACAGTGCGGAGGACGCATCCCGAATGCTTGGCCTGCCGCTCCGAACGGTGAATCACATCCTGGGGAGCGAGGAATAAACAAAGGGGCTCAAGGCCCCTTTGTTATTGGTTCATCCAGTGTAACCACTATCTCGACAGACTCACCGAAGTGAAGGCGGGCGAGTCTGATTAGTTCTGCCACATCTGGGTAGTTGTCACGGACGCACTGACGCCGTTCTTCCAGTGACATTTCAGCGGACACGCGGCCCCCCTTTTGTCCAATTCACTTCGCCTTGGGCCTCTGTATCTCTTGAGGATTTTAGGTCTCTCAAAATCAAGAGGAAGCCAAGACTCCTTAGAACGCCTGCCTGACTTAGTGAAGTTTAGTCACGACCTTACTGAACCGCGCCA # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.57, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGTACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACACGTGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.40,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [58-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //