Array 1 6830-6598 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZBK01000018.1 Prevotella copri strain iAP144 NODE_48_length_13983_cov_86.3038_ID_95, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6829 36 100.0 28 .................................... GACTTGGTATCGCAGGTTTGGCTACCAG 6765 36 100.0 30 .................................... CTCTGACGTATCTTATTCTTATACGCGTCA 6699 36 100.0 29 .................................... GATAATTTGCCATATTGATTTGATTTTGA 6634 36 86.1 0 ............G.C.........AC...A...... | T [6614] ========== ====== ====== ====== ==================================== ============================== ================== 4 36 96.5 29 GATGAACATGCATTATGAATAGTGGGTAAGTACAAC # Left flank : GAAACTATCTGTGTGGAAAATCTTTCAATCAAGGATGGTATGTTGCAGGACAAGAAACATGGTAAGCATAATAAGCAAAAACGTTCTCGCAATAAGCTTATAGTTGATGCAGCTATGGGCATGTTGCGTATCAAGCTGCAGCAGAAATGTAAGTCGAAAGGAATCAACTTCATCAAAATTGAACGTTATTTTCCTTCTTCGAAGACTTGCCACTGTTGTGGAAAAATATTTAAAGGTTTACAGTTAAGTCAGCGTTCATGGGTGTGTCCTTCATGTCGTGCAAAGTTGGATAGGGATGTGAATGCTGCTATTAATATTAAAAATTTTGGAATTAGCAATAGTTCCCTAGGGAGGTGTACCCCCGAAGTAAAGTCTGTGGAGCATCGTAAGCAGAAACGAAGAAATGCCAAAAGCAGTGACGTTTCAGATGTAGAGAAGCAGAAATAAGAGAGCTCTAACATTGAGCAAATGCCTGTTATACAGAATAATATTTATCTGAG # Right flank : ATGCAGTCGCTATCCATTCGGCTGACGTCTGATGGCTTTACTTTCAGAATTTTTCATTAGGCAAAATGTATATTACGTATTTGTTCTTCTCTACATATCTTGTATATCCTCTAAGATTCAGAATATGCAGATGGAATTAGTAAAAAAATAATTGATAGTTAATTATGGATAAGACAATAAATACAACGCTCATCATAGGAAATGGGTTTGATTTAAGTATGGGTAAACATACCAGTTATAAGGAATTTTATGAGAAGCTGGTAAAGAATAAAGGTTTTTGGGATACCTCAAATCCGCAACCTATAGGGTTTCGTGGGAATTTACTTGTAAAACGACAAAAATTCTTTTATTGTACATATTCCTTGGGCATAACAGAAACGTCGTAAACACAAAATTCCCTTACCCCATAAAGCGACTTGAGGTAATACGCCGGTTTAACCAGAAAAGCATGGCCTTTAACCAAAGTCTGTCTTGAACAGGTTGGCATAAGCATTGTTGTC # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATGAACATGCATTATGAATAGTGGGTAAGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 58521-61116 **** Predicted by CRISPRDetect 2.4 *** >NZ_VZBK01000079.1 Prevotella copri strain iAP144 NODE_13_length_75403_cov_62.1249_ID_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 58521 30 100.0 35 .............................. CCGTTTAATGAGCATGATACCCACGTTGTTTGTGT 58586 30 100.0 35 .............................. AGAAGTGACAAACTTTATAAAAAGTGAATATAAAA 58651 30 100.0 34 .............................. TTATAACTTTAATTACGTAGCCTAATGAAAAAAC 58715 30 100.0 36 .............................. TTGTTGATGATTTAGTTGCTGATTTCCGATATCTGT 58781 30 100.0 37 .............................. TTATAACGAAGAGATGGCAGATATGCATCTTTGTCTC 58848 30 100.0 35 .............................. GTAAGAAACTCAATTTCAATTGGAACGGCAAAACA 58913 30 100.0 38 .............................. TGAATGGCCGTCACCCCTTCTTGGAAATAGAACGAAAT 58981 30 100.0 39 .............................. CCCACCGCCCCCTTGAGTCTCTGATGTCCCTTTGCTAGA 59050 30 100.0 34 .............................. GTCTATCGTCGCCATTGAACGTGCAAAGGCAACT 59114 30 100.0 36 .............................. ATGCTTGAAGGTTACTAAGGCTCGGTTGCGCCCATG 59180 30 100.0 39 .............................. TAGGGTGGGACCCACGGCTGCTGCGCAGCCCCCACCCTA 59249 30 100.0 38 .............................. ATGTTGTTTCTACTCTCCGCGAATCTCTCTCTGCTACA 59317 30 100.0 34 .............................. GAGACAAAAGGTCAACATTTCCATTGTAAGAAGC 59381 30 100.0 39 .............................. GCTTTTTGTGCACCAGCTTGTACACTAGTTTTTACTTTA 59450 30 100.0 36 .............................. AGGCTCTGGAGGGCGAACTGGGCTGCAAGCTACTGA 59516 30 100.0 37 .............................. GATAGAGAAGCAGATAGAATACTATAAAGATGTGATA 59583 30 100.0 34 .............................. AGAGCTATTCCTGCGTGGATATGCAGTATAAGGA 59647 30 100.0 36 .............................. GAAAAAGGATTTTGAGTCAAAGTACAGCGAGGATGA 59713 30 100.0 34 .............................. GGCTTATTTGTCGCCTAGCGGAATTTAACCCCCT 59777 30 100.0 38 .............................. AAGAATGATGCAAGTAAAACTCAGGCAAAGCTGAGAGT 59845 30 100.0 37 .............................. TAGTAAAATATGGATATGAATATAAAGGCATATCCCG 59912 30 100.0 34 .............................. AGGCACGCCGCAAGCAGTATATCCTCGGCATCAT 59976 30 100.0 34 .............................. GTTATGATGAAGAGGATTTCGCTACTGATGGCGC 60040 30 100.0 34 .............................. AAAAGAACGCAGTTATAAATCTCGCTATTGAATA 60104 30 100.0 35 .............................. TTCAGTACCGCTACGCATGGCGGAACTACGCTCCG 60169 30 100.0 36 .............................. AAGTGTTCCTTGATTTTTTTCCAGAGTGCGCAGTTG 60235 30 100.0 37 .............................. GCGGTTATCTCTGCCTTGGCAGTAATGAGGAGTTGCA 60302 30 96.7 34 .............T................ TAGAATTATGGCAGTAAATCAAAAAGCAATCGGG 60366 30 100.0 35 .............................. GCGCATGCTCATGACCACCGTGGGCGCAGCATACA 60431 30 100.0 36 .............................. AGTGGAAGAACTATCTCACCAAGAAGGAGGCATCTG 60497 30 100.0 35 .............................. GAGAAGGGATTGATAAATTCACAGGAGAATGCTAT 60562 30 100.0 37 .............................. TTTCAGCCATCATTGATGAAGAGGTGAAAGCTGTAGA 60629 30 100.0 34 .............................. CAATTTTCAGCACCTCGTGTGACAATCACGAACC 60693 30 100.0 34 .............................. ATTTGGTCTAGCATATCATATACAATAGTAATAA 60757 30 96.7 34 ............................T. TTTTTTCTAGGTTTTAAAAAGAAAAAGGCTGGAA 60821 30 100.0 37 .............................. AGTACAACATCAAGGATGAGTGCATCAATCCGCACGT 60888 30 100.0 35 .............................. ATCATCTTTGCGCCTTCGATTGGTATCTCTTGATC 60953 30 100.0 36 .............................. GAAATATAGAGAGAAAAGCGGGCGTGCGTATATCGC 61019 30 100.0 39 .............................. ATAGACAATATGTATTGAGTTAATTCCGAACAAAGTTCT 61088 29 80.0 0 AA..T...C................-..T. | ========== ====== ====== ====== ============================== ======================================= ================== 40 30 99.3 36 GTTCAAATTGTACCTTTATGGAATTGAAAT # Left flank : CCTTTTAAAATGTATTGGTGATATGTATGTGATTATAGTTTATGATGTTGGTGAGAAGCGAGTAGGCAAAATGTTGAAGCTTTGCCGCCAATATTTGTGTTGGATTCAGAACTCAGTTTTGGAGGGAGAATTATCTGAAGCTAAACTTCGGGAATTGCAAATGAAGATGAAAGCTATCATTGATGAATCCGAGGATAGTGTCATTGTTTTCACCAATAAAATGGGGTATAATATGAACAAACAGATTCTTGGAAAAGAAAGAATGTCTACCGATAATTTCTTATAAAGAGTTGTCGATGTGGTTCTAATTTTCCGTTTCTAGGTTCGGAAAAACCTCCGAAAGTGTTCTTTGACTTATTGAAACCTCCATAAATAGGCAGGTTGTCGTAAGGCCGCAGAAAAAATATCTTTAGGCATCGACATTTTTTCTGAAGATTTTTTGTATCTTTGCACCCGCAAACCTATTGATTCTTCGAGCATCTATGTCTAAGGATTAACGG # Right flank : TCAGAAGTACTGATAGCTTTAGTATTATACCGCAATCTCTAGTTATAAGTGTTCAGAATGTGTCTCCTCCTGCCACAGCATTCGACTCCTTCAGCTATCGCATTCGACTCCTTCAGCTAATGCATTCGACTCCTTCAGCTAATGCAGCCGTCTCCTTCTGCCAACTCAGCCGTCTCCTTCACCTAATGCAGTCGACTCATTCAGCTAACTCAGTCGTCTCCTTCAGCCACCGCATTCGACTCCTCCAGCTATCGCATTCGTCTCCTCCGCTCACCGCATTCGTCTCCTTCAGCCACTGCATTCGACTCCTTCAGCTAATGCAGCCGTCTCCTTCAGCCAACTCAGCCGTCTCCTTCAGCCACCGCAGCCGTATGTGTCAACTCAATGAAGTAGATGAACTCGTGAAATGAAGTGGATGAACTCGTGAAATGAAGTGGATGAGTTCGCATAATGAAGTTCATGATTTCTGCATAATAATTAATACATGCGAATGGTAAAGC # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAATTGTACCTTTATGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //