Array 1 10537-11707 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAALED010000572.1 Dietzia sp. B19 NODE_803_length_87789_cov_145.358276, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================================================== ================== 10537 29 96.6 32 ............................T CATGGCGCCGTCCCCGATCGCGAACGCGGCCA 10598 29 100.0 32 ............................. AACCCCACGCTGCCGGACACCGATCTGCCTCC 10659 29 96.6 32 ............................G GAGCCCCAGCGCCAACCGGGCTGGCTTCCCTC 10720 29 79.3 33 .......................NNNNNN NNNNCAGGACTGTCAGTAGCCCGAAGCCGTCAG 10782 29 96.6 32 ............................G TGGATCAGCCACAATCCACTCTCGAGAAGCTC 10843 29 100.0 32 ............................. GACATGGTCGAGTTGGATGGCCTTGGGACGGG 10904 29 100.0 32 ............................. GGGGATGTCATGTTCGCGCCCGAGGACAGTAG 10965 29 82.8 70 ........................NNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAACTGGCTCGGTGTTTACCGCCCGCACG 11064 29 100.0 32 ............................. TCGTCCCGGGCGTGCGTGCCGACCTTGAGCTC 11125 29 96.6 32 ............................G TGGATCAGCCACAATCCACTCTCGAGAAGCTC 11186 29 100.0 32 ............................. GAGTACGGGCCGAAAACGGGGATGCTATGGGG 11247 29 79.3 34 .......................NNNNNN NNNNGGCCAACCGCTGCCGAAGTGCTGCCCCGAT 11310 29 100.0 32 ............................. TCGTCCCGGGCGTGCGTGCCGACCTTGAGCTC 11371 29 96.6 32 ............................G TCAGTTAGGTGCTTGATGATCCGGTCTGCTTC 11432 29 82.8 35 ........................NNNNN NNNNNGTCCATACTCCGCTGCTGTAGTCATGCCAA 11496 29 100.0 32 ............................. TCGTCCCGGGCGTGCGTGCCGACCTTGAGCTC 11557 29 96.6 32 ............................G CCGAGGTGCGTGATCTTCGGACCCGGTTCGAC 11618 29 96.6 32 ............................T CACCGTGTCGGGGTGCGCGTCTTGCACGTCTG 11679 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ====================================================================== ================== 19 29 94.6 34 GTCGTCCCCGCGCAGGCGGGGCTGTTCCC # Left flank : GTTGCTACCGGAAACGGAAGATGAGGGTGAGGACGGGCTCGCGACGGTGATTGAACTCTGGGATGAGCAACTCGGGCGGGTGTCTGGCGGTACGAACTACAGCGAGGACGTGCCATGGTGACGATTGTCCTCACAGCTTGCCCAGCCGGGCTACGGGGTCACTTGACTCGATGGTTGATCGAAGTGAGTCCAGGAGTGTTCGTGGGCAGAGTCAATGCGAGGCTGCGTGATGAGCTCTGGAAGCTCATCCTTGAACTCGTGAAAGACGGGCGAGCGATCATGACTTACTCGACAAGGGAAACAGAGCAAGGGTTCGACTTTCGTGTCCATCGGCACGACTGGTCGGTAGAGGATTTCGAGGGGCTACGTGTGATGCGTAGAACCACCTCTAGTAAGCGCACCACCGGAATGCGTAGAGGTTGGTCTGCTGCGTCGCATCTGCGCCGGAGAAAGTAAACTAGAACTCCGAGTACTGCTCCATTTTCCGCTGGTCAGCCAGT # Right flank : TAGCTCGTCGGCGACGCGAGAATCCCCGTCGGGGTCGTCCCCGCGCAGGCGGGGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCACGGACCGCGTCACGATCGCCTCGCAGTCGTCCCCGCGCAGGCGGGGCTGTTCCCACGTCCGGTGCCGCCCCGACCCATACCCAGGGGTCGTCCCCGCGCAGGCGGGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:-0.12, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCAGGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCAGGCGGGGGTAATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.60,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 12693-13396 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAALED010000572.1 Dietzia sp. B19 NODE_803_length_87789_cov_145.358276, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 12693 29 96.6 32 ............................C GGGTGCGGGTCCACCTGTCGTTGCGTAGTGCC 12754 29 96.6 32 ............................C GTCGACTTCTCGCCCGTCTCCGGGTCCTCGTA 12815 29 100.0 32 ............................. GCCGACAACATCAACGCTCGCGGCAAGTTCGC 12876 29 96.6 32 ............................T GCTGAAGCAGTACGGACTCCCGGCGACTATGG 12937 29 100.0 32 ............................. TCCTTCTCCGGGGTCGTCACCTGAACCGTCAT 12998 29 100.0 32 ............................. GTCAAGGCCGATGCTCGCCGTGAGGGCCTGGC 13059 29 96.6 32 ............................A CGTGGCGGATAGCTAACAGGTGCTTCGACGTG 13120 29 96.6 33 ............................A CTCCGCGGCGAGGACATCGACCGCGACCGACAA 13182 29 100.0 32 ............................. CCCATCAAGTCCTGCGTGCGACTACCCGCAAA 13243 29 82.8 35 ........................NNNNN NNNNNTCTGTCTGGTTACATGATGTGTTACCTCGA 13307 29 96.6 32 ............................C GCCCACTGGAGCGCGCACTTGACCGGGATGAA 13368 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= =================================== ================== 12 29 96.6 32 GTCGTCCCCGCGCAGGCGGGGCTGTTCCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTATCGCGGAGCAGTCGGGTATCACGCGGTCGTCCCCGCGCAGGCGGGGCTGNNNNNNNNNNATGTCGGCCATCGACTTGGAGGCCCTGGTGTCGTCCCCGCGCAGGCGGGGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCGCGTGCCAGTGCACCGTCTGCCCGCGTCGTCCCCGCGCAGGCGGGGCTNNNNNNNNNNCGCTCGTGTCGGGCGGCATCGAATACAGG # Right flank : TGCACCCGGTCGACCTCGACCGTCCCGTCCTCCGTCGTCCCCGCGCAGGCGGGGNNNNNNNNNNGCCCGTCCGGTGGGGGCGATCCGTCCGGTGGTGGTCCGTCGACTGGTGGCGGATCGCGTGGTGGACCAGCCGCTGGTGGATCCGGGGGAGGCGGCGCTGGAGCTCTTGGTTCCGGCCCCTCGACCGGCGGTGGTCAGCAGGTGGCCGCGGCAGGCCAGACAGGTGCGCGGATCGCGCGCAACGCCGCCGGCATGGCCGGGTCTGCCTTGCGAGCGGGCGGCGGGATCCTCGACGACTCGGTAGGCGCTCCGGTCAATCCGGGGTCGGCCTACCGGTAGGGGGAGCTGATGAGCGAGACGATGGCGCCGCAGACCGAGACGACCACCTACACCCTGGGCCGCAAGCGGGAGCGCAACTTCATTGGCCGCATCCCGGTCCGTACGGCCGTGGTGGGGTTTGTCGGCCTCATGGCGTTCGTGGTGTCGATGTTGGCCCA # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCAGGCGGGGCTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCACGCGGGGCTGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [21.7-20.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 44918-44402 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAALED010000572.1 Dietzia sp. B19 NODE_803_length_87789_cov_145.358276, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 44917 29 93.1 32 ..............T.............G TGATGCGGACGATGTTTCGCAATGAGCACCGG 44856 29 96.6 32 ............................T CATGGCGCCGTCCCCGATCGCGAACGCGGCCA 44795 29 100.0 32 ............................. AACCACGGGTACGTGAGGTACTCGCTCTCGAA 44734 29 100.0 32 ............................. AACCCCACGCTGCCGGACACCGATCTGCCTCC 44673 29 96.6 32 ............................G TTCGCCGGGATGCAGGTGTTCAACACGACGCT 44612 29 100.0 31 ............................. GCCAGCAGGCGGTAATGGCAGGTGCTAGGAC 44552 29 96.6 32 ..T.......................... GCCTGCAACGACCCGGCCGCGAAGCTGGCCCA 44491 29 100.0 32 ............................. AGGGCCGCGATGTTCGCCGCTCAGCTCGGACA 44430 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 9 29 97.7 32 GTCGTCCCCGCGCAGGCGGGGCTGTTCCC # Left flank : TGGAAACGCCAGCCAGATAGCAGTCCGCCACGACCGTGATCAGGGCGGACTCGGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCAAGCAGGCCTGCAGGGTCGACAATGTGGGGTGCGGTCATCGCGATGACTCCTCGAGGATTCTTTAGACGGTTGACTCGAAGGATCACGCGGTGGCCGCTTTAGATCCGTCAACGACACGGGTGTCGGAGACGATCTCGGCCACCGAGTTACACCACCCTATGGGGCACTACTGGCGG # Right flank : ATGACGGCGAGCGCGAACCCGCACTGAATNNNNNNNNNNCGTCTCCGCGCAGGCGGGGCTGTTCCCCATCCGCTTTGGAGACGGACGCTCTCCCAGTTGTCGTCCCCGCGCAGGCGGGGCTGTTCCGGTCTTGACGCGGTCGACCGAGTTCTGGATCGTGTCGTCCCCGCGCAGGCGGGGCTGTTCCGAACGTCTCGCCATGATTCTCCGCCAGCCNNNNNNNNNNCGCGCAGGCGGGGCTGTTCCCTCGCAGCAGGTGTTCTACAACTCCGGCGGCGGGTCGGGTCAAGCCCCTGGTAGTGGTGTAACTGGTTTTTGATCCTTCGTTGGTGGTCAGGCGGGTAGTTGCATCAGTGGATCGGTGGTCACCTCCGTCGTCGAGTTGGTGTCGGTGTCGGTGGTCAGTGTGAGTCGGCAGCGGCTCAGGACTTCGAGTCCGAGGTAGCGGCGTCCTTCGGCCCATTCGTCGGTCTGCTCGGCCAGGACTGCGCCGATGAGGC # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCAGGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCACGCGGGGCTGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //