Array 1 67086-69602 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNSS010000006.1 Lactobacillus delbrueckii subsp. bulgaricus strain CIRM BIA 864 CIRM_BIA864-i1-1_scf6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================================================================================================= ================== 67086 28 100.0 33 ............................ CCCAAGCAATTCGCCGTCAATGATGGCAACTGG 67147 28 100.0 33 ............................ CGAAGGGGCGGGCGTTGAATTGCTTATCACAAG 67208 28 100.0 33 ............................ TCAAGTCGCTGATAGCACCCCATTCCATGCGAG 67269 28 100.0 33 ............................ TTTAAAAAAATGATAATCAAAGTTACTCTTCGG 67330 28 100.0 33 ............................ CTCTTAATTTAGCGGCTGGGGCTTTCGCTTTGG 67391 28 100.0 35 ............................ TTCCAGCCGTACCAGCAGATCGTCCGCCAGATCGT 67454 28 100.0 33 ............................ TGGACATCCGACGACGAGGAGGTCCGGGACGCC 67515 28 100.0 33 ............................ TACTCCTTGACGAATAGCCGCTTTTCAGCCTTT 67576 28 100.0 33 ............................ TATAGTGATTTAGTTGCAAGCCTTGACCCTTTA 67637 28 100.0 33 ............................ TACCAGCAATTACATAGTTAGAACCGTTGATGC 67698 28 100.0 33 ............................ TAACGCCAGCACCCAGAATTAAGCATAAAAAAC 67759 28 100.0 33 ............................ TTGCTGATATGCGACATTAATCGCATCGCCTGT 67820 28 100.0 33 ............................ CTGTTATCCATGTTTCAAGGTTGCGGCCGTTGA 67881 28 100.0 33 ............................ CACTGAAGTAGGCAACGGCATGCATGCAAGCTA 67942 28 100.0 33 ............................ CGTCCCCGGGCGCTTGGTAGCAATCCAAAATAG 68003 28 100.0 33 ............................ TGTAATCCCGGCCGGCGGCTCTTTTACTTGTAA 68064 28 100.0 33 ............................ CACACTTCAGTTGTCCAGGCGGCAACACTGAAG 68125 28 100.0 33 ............................ CGGCAACAGACTTCAGTTGTCCAGGCGGCAACA 68186 28 100.0 33 ............................ TCAAGTGTTTGCAGAGAGAAAACCAGTCGAGCA 68247 28 100.0 35 ............................ TTACTGACAGTGAAAACCATACGTTTAAAATTACT 68310 28 100.0 33 ............................ TGAGTGGCTCGCCTCTCTGGTTGGCGCTAAAGG 68371 28 100.0 33 ............................ CCAGGCAACTGCAGTTGGTCAACACTGCAGCAA 68432 28 100.0 33 ............................ CTACCAGGCAACACTTCAGTTGCGGCCGGCTGA 68493 28 96.4 33 ..........................A. TGCGTCCATGAACACTTTAACAGCAGCCGTGGA 68554 28 100.0 33 ............................ TGATCTGGGTTAAACCTTATTGAATAGACAACC 68615 28 100.0 33 ............................ CCATATAGTTGTGATTGCCATTGCCGTCCCACG 68676 28 100.0 33 ............................ CGCCTGGCAGCCTGGCAGTCTAGCCGGCAACCT 68737 28 100.0 33 ............................ TCGGACATTTCTCTAGCTACATAATTTTTAAAT 68798 28 100.0 33 ............................ TTATATGTCTTCGTGTCTAACTCCTCCGAGATC 68859 28 100.0 33 ............................ TGTCTGCTCTTCCCTGTTGCCCGCTCCAGCAAA 68920 28 100.0 33 ............................ TGTTAGATATTATTAACTTTTTTAAAAATTTGA 68981 28 100.0 33 ............................ TAAAAGCACGCTTATAAACGTGCTTGAATAGGC 69042 28 100.0 33 ............................ CAGATGACCCAAAGCGGGCGAAGTGGTAGGCGT 69103 28 100.0 33 ............................ CTTGGTAGCACGTCCCGCCGCCGATGTCTAGCA 69164 28 100.0 33 ............................ CGGACTAAGACATGCATGCATGCAAGACAATAG 69225 28 100.0 34 ............................ TCACCGGGCACTGGACTCGCACCAGTCTAGCGTC 69287 28 100.0 33 ............................ CCGGTCAAGGTCCCGCCAATCTCCTAAAATCAG 69348 28 100.0 33 ............................ CAATGGACTTTTTTTGGTGCTCCGTGAGCCGCC 69409 28 96.4 137 ...........................T ACATCCCACTGTTATAGATCTATTTTACTTAATCGGCTGTGATCTCACTGCCATTAGTGAGTAACATGGGGCGAAACAATATTCCTCACGTATGTGAGGAGAATTCTTTCTTTATGCTATTGTGTTTTTCGTACTGT 69574 28 78.6 0 ...........AT.T.C....A.....A | T [69580] ========== ====== ====== ====== ============================ ========================================================================================================================================= ================== 40 28 99.3 36 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGACTGAATACCGAAACTGATCAGATTTTATCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATCACTTCTGAAATGCTAAGTAAGGAAGGCGTTCCATTGCAAGATGCATTGGAAGAACTGACTGACTTTGTTGGAAATGTACCAATTGTTGGGTACAATTTTAGATTTGATTCTGTATTTTTGAATAGGGATTATCGGAAATGCGGGATGCAAGAATTGAAAAATGAGATCAAGGATTTACTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACGGACTGTATTATCAAACTACGGGATCGAAAATAAGGTGCCGCATAACGCTGTGTCTGATGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTCTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : ATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTAATAGAGAAGGAGTGAGGAACAAGCATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAGAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTTTGCCTCTGACGACAGAGTCTGCATTGATCGAAAACCGGGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATACCACTTGATCATGGAAGTAGTCACTCCCTTTGAAGACGTCCATGGCAACAAGCCTGGCACC # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.22, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //