Array 1 1561262-1566950 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMNI020000001.1 Clostridium sp. FP2 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1561262 37 100.0 35 ..................................... TGTTCCATTTCTTCAAACTGCGTAACATACTCTGC 1561334 37 100.0 36 ..................................... ACTAACCTCTAGCCCTAACTCTCTATTAGTCTTTAA 1561407 37 100.0 35 ..................................... AGATATAAGCACAGAGGGCACTAAAATTCAAACTG 1561479 37 100.0 36 ..................................... CTGCTGGCACGAGCTTGCCAACCGAAAATGTATTTG 1561552 37 100.0 38 ..................................... AGGTGATTATAAATACATTGAACCCAATATCCAATTTG 1561627 37 100.0 38 ..................................... TACCGACTACAAGAAGTTAGGGCATAGGATGCCTACAA 1561702 37 100.0 38 ..................................... AGGCGTGGGTTTAAGCTTATTAAGTGTGTTATCAAAAG 1561777 37 100.0 38 ..................................... AGGTGATTATAAATACATTGAACCCAATATCCAATTTG 1561852 37 100.0 35 ..................................... ACTGCTATTGGTGGAGAAAAAACAGATAATGCAGT 1561924 37 100.0 37 ..................................... TTAAATGTATTTTTACTTAGCATTTTTAGCCTTCTTG 1561998 37 100.0 36 ..................................... TGAAGAAAGACATTATTAAAAAGGTTATACTATATG 1562071 37 100.0 37 ..................................... TGATATATGCTAATTGATTTCCACCATAATTTTTAAT 1562145 37 100.0 37 ..................................... ATAAGTGCAAATATAGAAGAAATTAAAAATATAGAAG 1562219 37 100.0 36 ..................................... AGCGCCATATAGAACATTCCCAGAAGTAGACCAGCC 1562292 37 100.0 37 ..................................... TTGGCCATCTACTTTTATATCTTTAATGCCAAAACTA 1562366 37 100.0 39 ..................................... TAAATAAAAATCGTATAACTGCAAATGCAGTAGTGTCTT 1562442 37 100.0 36 ..................................... ATTGAGAGTGAAACTTCTGCAAATTATATTAAGAGT 1562515 37 100.0 36 ..................................... TTTGCGTGTACTTTCATCTAAACTATTAAGATAATT 1562588 37 100.0 36 ..................................... AAAATAGTTGTATTAGTAAAATTAATTGCAGCTAGC 1562661 37 100.0 35 ..................................... TGGAAAGATATAGCTTACTGCACAACCATTAATTC 1562733 37 100.0 35 ..................................... TTATAAAATAGTCTATTATTCTATTGAATAGTTTG 1562805 37 100.0 39 ..................................... ACAAATGTTACTTCACTTTTCAGATATGTGGTGCAGTAG 1562881 37 100.0 37 ..................................... GCGGATATGTGGAACTTCATCACGTGATATACCGTAG 1562955 37 100.0 37 ..................................... ATGTAATATAGAATCATACATAACATCGCCTACATTG 1563029 37 100.0 38 ..................................... TTGAGGTTCTAACCCTATAGCTACAGTAAGCGAACTTT 1563104 37 100.0 36 ..................................... AGGCCTTATATTAGTTGTGTCCATTGTTGCATTTGT 1563177 37 100.0 37 ..................................... ATTGAGCACTTCTGTTGACCACCTTGTAAGCTATTTG 1563251 37 100.0 37 ..................................... TGTAGGAATTCCAGTTTGGTGTTGTCTAAAAATTGGG 1563325 37 100.0 36 ..................................... CTGTTTGTTTACCACCATACGTATACACTTCCGTGC 1563398 37 100.0 37 ..................................... TTAATATATCTATTGCATTGATAACTGCAGGTGGTAA 1563472 37 100.0 38 ..................................... CTACGCCCCAATAACTAAATCTTTCTGCTCCCGTAGAA 1563547 37 100.0 37 ..................................... TTTATTCATGCTAACTATTTTATCAACTACACCTTTT 1563621 37 100.0 36 ..................................... ATAAGAGGGGTCTAGTATCTCCTCATTTGATAATGT 1563694 37 100.0 36 ..................................... TTACATATGTATAATTATCAAATGCCCTGTGATTTG 1563767 37 100.0 36 ..................................... ATTGCTTTTCTATCCATAAATTTTACTGCTTCTTTG 1563840 37 100.0 36 ..................................... ACAATACAAACCGCCTCCTACCCAACTTTAACATCT 1563913 37 100.0 35 ..................................... ATATATTGTACATTCTCGGGTGTATATTTAGCTTT 1563985 37 100.0 35 ..................................... ACTAGTCCCACAATGCCATCTACGATTGCATTAGC 1564057 37 100.0 36 ..................................... TTTGGCATGATTCTATAATAGTTATGCTTTCATTCC 1564130 37 100.0 36 ..................................... CTTGTCCATCTTGTGCAATACCTTTTGTAGCTTCTG 1564203 37 100.0 35 ..................................... GCGGAGGAGTTAAAACAGACTACAAGGCAATTATA 1564275 37 100.0 37 ..................................... ACAAATGAGGTATTGCGTGTATGAGTAATGATAATAG 1564349 37 100.0 35 ..................................... TCTACTGGTACCTTAGCAACTACTACTGGTGTAAG 1564421 37 100.0 37 ..................................... ATATGCAAGGTAACAAAATACTTATTTATTATACTGG 1564495 37 100.0 36 ..................................... ACTAGAGCTCAATTCGTGACTACTGAAGGTAAGGAT 1564568 37 100.0 36 ..................................... AAATTTAAAGTTGGGCATGAATATCAACTTGAATTT 1564641 37 100.0 36 ..................................... AATGGCAGGACTTGGTACGTGTGTTCTGTGCAGTGT 1564714 37 100.0 36 ..................................... TAACAAAATTAGTTGAAACCTTAGAGTCTACAGAAG 1564787 37 100.0 36 ..................................... AAGAAAGGTGCTTAGTCAAGGGGGGTAAAACCCTCT 1564860 37 100.0 36 ..................................... TCATGGTAATTGGGGAAGCACAAGTGAATGGCTTTA 1564933 37 100.0 38 ..................................... CCATAATATCCTCCTTTCATACCTTTTGGGTTTGTATT 1565008 37 100.0 36 ..................................... AATTGAAACTGGAATGTTGCCAAATGATTTAGACAT 1565081 37 100.0 37 ..................................... TTCATTTTCTACTGTAATTACATCAGTAGCATTAAGT 1565155 37 100.0 35 ..................................... AATCTGAAATAAATATCACATCATCACATTGATTT 1565227 37 100.0 37 ..................................... TAGAAAACAACTTACTGATTAAATCTAAAGAATACAT 1565301 37 100.0 34 ..................................... TCGCTATCCGATTCTTTTGCATTAGAAATTTGGG 1565372 37 100.0 35 ..................................... AATATTTCCGCAACATTCTCGGGAACTTCTACACT 1565444 37 100.0 35 ..................................... TAAAGTTTCACCGCATATAGGACATATGATGATAA 1565516 37 100.0 38 ..................................... CATATGAATATGCCATGTCAGAAATGTTAAATGTATTT 1565591 37 100.0 37 ..................................... TATGGAAAAAGATTTAAACCAAGAACTTATGGAAGAT 1565665 37 100.0 36 ..................................... TTGAGGATTTTTGTTTGATAGGAGATCACAACCCAG 1565738 37 100.0 36 ..................................... TTGGTTAGGTAATAGAGCAAGTGCCAAGTGGAAAGA 1565811 37 100.0 37 ..................................... CTAGTTTCACGTGCTATGGGTGATGCAGGTATTAAAA 1565885 37 100.0 35 ..................................... TCAGTAGTTGCTACCATAGGGACTGCTACTTTCTG 1565957 37 100.0 37 ..................................... TTAAGAACTTTGTCTATAATTTGATTAGGAGTATTTA 1566031 37 100.0 38 ..................................... TCTAATCTTCTCCCAGTATCTTTGTCTTAGTTCTATAT 1566106 37 100.0 37 ..................................... TTGGGCTTTTCGCCTTCTACACTTTCTGCAATAACCG 1566180 37 100.0 36 ..................................... ATAAAAACGATAGAGTTGTAAAATTCGCTATGGATA 1566253 37 100.0 35 ..................................... TTAAAGAAAAGAGTTCGTAAAGAATGGGAGTATGG 1566325 37 100.0 37 ..................................... TTGAAAGTCGGGAATGTAGGCTAAAACTTCGTATTTT 1566399 37 100.0 37 ..................................... ATGTCTACAGAGAATTACACGAGCCTAACTTAATACT 1566473 37 100.0 37 ..................................... TAAAGCAGACAAAGACCATAGTATAGATAAAATGAAA 1566547 37 100.0 37 ..................................... CCAATATAATTATTAACTGTGTATAGTGGTAATATTA 1566621 37 100.0 35 ..................................... TTATGATATTTAAGATTTAAGGCTAAATCAATATA 1566693 37 100.0 38 ..................................... CTTTGTATTTTTCAACATCTTCATTAGCTATTTTAAAT 1566768 37 100.0 36 ..................................... TTCAATGATTATTAAGTTAAACAGGACTTAGAATAA 1566841 37 100.0 36 ..................................... ACATGCACCGTATTAGCTCCTAACGGGAGTAAATAC 1566914 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 78 37 100.0 36 ATTCCTAAAGACATTAAGCTCCATTGGAGATTGAAAC # Left flank : GCCTTGATGGAAGAGCTTGAATATGTACCATTTTTAATTAGATAAAAGGAAGGGAATGTGATATGATATATTTAGTTAGTTATGATATAGTTAATGATAAAAAAAGAACTAGACTTCATAAGATGTTAAAAAATTATGGTGCTAGAAACCAATATAGTGTTTTTGAATGTGATTTAGATGGTAAAAAATATATTGAACTTGAATATAAAATTAAAAAAATCAAGATAGAACTAGGTGACAGTATTATGGTGTACCCTATATGCTCATCTTGTGAATCTAAAATTATAAGAAAAGGCATATTTGCACCAATTGATGTTAAAAACATGATTTATTAAATCGCAAGCTTATGTGTAACGAAAAACACGGGACCCTGGCGATGCTTGTAAATAGCCATTTTGGCGGGATTTACTATAATATTTGTTCTATGTTTTTATGAAAAAATGATACTTTGCGAATAATGGGGTCTGAAACCAGTGGTTTCAAGGGGTAAAACGCGAGCG # Right flank : CATAAATTAGCGCTTAAAAACATGGAGGAAAGTTTAAATTCCTAAAGACATTAAGCTCCTTGTATTTAAATTGTTGTAATTGAGTTGCTTGGGCTTGGAATTGTTGTGTTGAACCTTAACATTAGATGTATTTAAATACTGCAGGGCTTGTTTTAGGTATATCTTTTAATGAAATTATGACGATTTTAACAGCACCAGATTCACTCTTTACCTAGCCCTGGTTGGAAATATATATTAAGACGCTAAAAAAATATGGTTACCTGTGGTCAATCTTTCCAATAGTTTAAATTTCCAATAGTTTATGATAGAATAGGTAGTTATGGATTGTAATGCCATAGTAGAATAATGGATTTTTAGCAAGACTGTTTCGTTTTAAGAATGTAACTGTTAAGCTTGGGATTCAATTTTTTTATATTAAAGGAGTGATACAAATGAAAAATGAAAAATCAAAGACATTAAAGGGGAAGTTAGTTTTTATAACTTTAGCTATTTTCTTTGCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTAAAGACATTAAGCTCCATTGGAGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.27 Confidence: HIGH] # Array family : NA //