Array 1 6238-7131 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QLPR01000035.1 Streptococcus iniae strain QMA0491 NODE_4_length_99776_cov_61.1502_ID_1307, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      6238	    36	 100.0	    30	....................................	AAGCGGAACAGATGACAATATATGATTTTT	
      6304	    36	 100.0	    30	....................................	CACCAGTAAGTGTCATCTGAGCAGTACCGT	
      6370	    36	 100.0	    30	....................................	TCCTTTTTGAGTAAAAGCTATTGTCTCATT	
      6436	    36	 100.0	    30	....................................	TTTGATACGATCTATGTCAGCGAGCATTTG	
      6502	    36	 100.0	    30	....................................	GTTTTAGCTTTTTTAAATTCTTCTTGCTTC	
      6568	    36	 100.0	    30	....................................	GTGGCATTTTTGGAAATAGTTAGACAATTA	
      6634	    36	 100.0	    30	....................................	AGGTGTCAAACTTATCACAGCTCTTGTTCA	
      6700	    36	 100.0	    30	....................................	ACAATTATTTTATGTCAGATATTGATGAAT	
      6766	    36	 100.0	    30	....................................	ATATATATCAATGGAAATACCAAAACGTTT	
      6832	    36	 100.0	    30	....................................	TTAATTCCTTGGTTGTCAGTGTAATAGATA	
      6898	    36	 100.0	    30	....................................	CGGTTTAGCTGCTCTTGAGAAGATTGTATT	
      6964	    36	 100.0	    30	....................................	TTAGTATTAAATATAATATCAACACCTTTA	
      7030	    36	 100.0	    30	....................................	TACAACAGTACCTATAAGTGTGGCTACACC	
      7096	    36	  75.0	     0	................T.....TG..T.T.TTT..G	|                             	
==========	======	======	======	====================================	==============================	==================
        14	    36	  98.2	    30	GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC	                              	       

# Left flank :   AACCAGAAGTAAAATCAATGATCGAAAAACTTGCTGCAACTATTACCGAATTAATTGCTTATGAATGTTTAGAAAATGAGTTGGATTTAGAATACGATGAAATCACAGTTTTAGAGCTAATTAAGGCCTTAGGTGTAAAAATTGAAACTCAAAGCGATACGTTTTTTGAAAAATGTCTGGAAATCGTACAAATATTTAAATATTTAACTAAAAAGAAGTTACTAGTTTTTATTAATAGTGGAGCATACTTTACTAGAGATGAATTTGAGAAACTGTTAGAATATATTAGTTTGTCTAGTCAACCAGTCTTATTTTTGGAACCAAGAAAGATGTATGATTTTCCTCAATATGTTTTAGATGAAGATCTTTTTATGCTAACTGAAAATATGGTATAATAGTATTAAGAAAGACAATAGTAATTAAAAGGATCATCAAGATAGAAGTCTAGCTGAGACAAATAGTGCGATTACGAAATTTTGTAGAAAAAATTTAGCTACGAG
# Right flank :  GGCAATATTTCCCATTTGAATAACTTACATATTCGGAAACCGCTTTCAAAAATAGTTTTTTTATGCTATACTGATAAAAAAGCTAAGTGAGGGCATTATGGAAAAAACCTTTTTTATGATTAAACCAGATGGTGTTAAGCGGGGGCTGATTGGTCAGGTTCTTGAACGTATTGAGCGTAGGGGTTTTGTGATTGAGAAGTTGGAATTGCGTCAGGCTGATGCAGCAATTCTGAGAAAACATTATGATTTTCTGGTTGATAAACCGTTTTTTCCAGAGATTGAGGCTTACATGACAAGTGGTCCTCTGTTGATTGGTGTTTTGTCAGGCAATCGTGTGGTCTCTTCCTGGCGTATGATGATGGGGGTTACAAATCCTAAAGATGCCCTGCCAGGAACAATTAGAGGAGATTTTGGGCAAGCGCCAGGAGACGATGGTGGCATTCAAAATGTGGTGCACGGTTCAGATTCTATCGACGCTGCAAGACGTGAAATTGATATCT

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:63.89%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTATTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
//