Array 1 88177-89486 **** Predicted by CRISPRDetect 2.4 *** >NZ_NDHQ01000003.1 Corynebacterium diphtheriae strain rz523 rz523_contig000003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 88177 29 100.0 32 ............................. CGTCAGCTGGCCCGATGTTACACCAGGCGGAA 88238 29 100.0 32 ............................. AGACAAAGACATTCCTGGATACATTGCTGATC 88299 29 100.0 32 ............................. CTGCAAGTACTACCTCGGAATCGTCATGCTAG 88360 29 100.0 32 ............................. GGTGGTGGCTTCACCGCTGGCGAAACTGCTTT 88421 29 100.0 32 ............................. ACCCTCACAGAAAGAAAGGAATCACTGAAATG 88482 29 96.6 32 ............................T TTGGCGTCACAGTAATCAGTGAATGCATTGAC 88543 29 96.6 32 ............................G CTGTAAAACGCAGAAAAGACCCCCTACCCTCA 88604 29 96.6 32 ............................G TGAGATGTTTTCTTCCGATGATGATGGAGCAG 88665 29 100.0 32 ............................. CGTTCGCGTGATGAAGTCGAGATCGATCGCAG 88726 29 100.0 32 ............................. GGAACTCGCCGATTCCCTCGGAAAAGGCGAAT 88787 29 96.6 32 ............................G CACCACCCAATTTGACGAGGAGCACACCCATG 88848 29 96.6 32 ............................G AATCAGGCAGACTTCGAGGAGTTTGGAAGGGT 88909 29 100.0 32 ............................. ACATCATGGTCAACACAGGAACCTGCAAGTAC 88970 29 100.0 32 ............................. GGGTGCGCCACCGGCTCCCTTCAGCCAGGAGG 89031 29 96.6 32 ............................T GAGCAGGACGAAGATTATCTAGCGAGTCTGTG 89092 29 100.0 32 ............................. AGCATTGTCGACCCCTTCAGCGAATCGCCGTA 89153 29 100.0 32 ............................. CAGCTAATACCGGCTCGCTCGTATGCCGCCGC 89214 29 96.6 32 ............................G TCTTGCCGTCGTCGACGATCAAGAAGTATTGG 89275 29 96.6 32 ............................G ATCGCCGCCTATCTCCTCGACAAAGCGGACGA 89336 29 96.6 32 ............................T TATGCCCTCCAAAAATGCCCTGTATAAACATC 89397 29 96.6 32 ............................G TGCGCTGCTTCGACGCCTCGAGCCATTCGGAG 89458 29 93.1 0 ...........GT................ | ========== ====== ====== ====== ============================= ================================ ================== 22 29 98.1 32 GTTTTCCCCGCACCAGCGGGGATGAGCCC # Left flank : CTTACTTGGAAAGAAGCTGAGGCATTGGCTGGAAACACAGTGCGTCTGCCAGCCCGAATAACACGTAGAGATTCGGATTTTAATGCCGTTATTGATTCGCTCGAAGCACAAACACCACCAGAATGGCAACGATCCGGTTTGCTTAAAGGCCAAGTTGCGTTGCTTTTCGACGAAAGAGGAGAGGCTCGTGTAGGTCGATTCCTAGTGCGTTATACCAATGAACGTGGATTAGAGGTGGAGGTCTGCCCAAAGGAAGACGCGTAAAAGGAAACCCCGCTGGTGCGGGGAAGTATGCCTATACAAATCTTGTAGAGATATTAAAAAGGCTCATCCCTGATCGCAGGGAACAATGCCAGCCTATGGCTAGAAGAAAGGACTAAGCAAATTTGGGTGAATGGCTGATCCTAAAACAGTAGAAATAAAGATGAATCAGAAAAATTGCTGAAACAAAGTTATATGTAATAAGCTCTAACTGGCTCTAAACGTGCAGCTTGATAAGT # Right flank : CAGGGACTTTGAGAACTGGACCGCCGTGATTCCTTGCACTAGCAGGGTGGATGAATCTTTGTTGAAGAACGGGTTTTGGGATCTGTGTTTTCATTCAGAGAAATCAGTAAATGATGGGTCTACTAAAAAATTTTGAAAAAATTAACTTTTAATATCTATAAGGTGTATTCTGTGGAGAAAGTGCTTCCTAAGTTGGGAGTTTTAAAACAATCAGGAAGGAGTTGGTGGTGGCTTCGTTACTGGAGATCCGCTGGATTCTGGCTCTTGATACTCAAGGTAACCAGATTTCAGTTGGAATACGAGATATTTTCGCGGGGGAGGTGCAGGTTGCCTATATTCAGGGGGAGTCCCCGGCTCAAGACTATGCTGTGATACGGCTTTTGCTGGCTATTTTCTGGCGTGCCCATTCCATGGATATCGACATGGACGTGGAACCTTTTGATTTTCTTGAATGGTTCAACAAGATGAGACGTCAGCTTGCTCGAAAAGGGAAAGATCAG # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGCACCAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.70,-12.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //