Array 1 64-751 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGEYC010000006.1 Pseudomonas aeruginosa strain Patient_19_PostExposure1 54672_c0006, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 64 28 100.0 32 ............................ CGGTAGAGACGTCGGTGAGCGCTGCGATCTGC 124 28 100.0 32 ............................ GCAATCGATCAGGCTATGACCGCCGAAGCCTA 184 28 100.0 32 ............................ TCGACGTTGCCGACCCGCGGCCGCGCCCGGTT 244 28 100.0 32 ............................ TCGGCCAAGGCTCCGGCATCGAGCACGATGCC 304 28 100.0 32 ............................ TTGAGGAACAGGCGCGCTACGTCCGCCGCGAA 364 28 100.0 32 ............................ TGTGCCGGGCAGGCTGGCCAGCGCCTCATTGA 424 28 100.0 32 ............................ GTCGGCCTGGAGTTTCGTCGGGCGTACATCAG 484 28 96.4 32 .................T.......... CAAGCGGACGGTGACACGGACTATCAGACCGG 544 28 100.0 32 ............................ TCCGGCACGCTGTGCTGAGCCTGAGCTACAGG 604 28 100.0 32 ............................ TCGCGCAATGATTTCAGCCGCGGAGCGCATAG 664 28 100.0 32 ............................ ATAGATAACACGTGTGACCGCGACCACTACCG 724 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 12 28 99.7 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTAG # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCTTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGAGGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAATAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGCCCCCCTCACTGCCGTGTAGCTAAGAAATCGCGAGCGATATAGTCCCGTAGGGCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //