Array 1 96872-94222 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXZP010000001.1 Klebsiella pneumoniae strain VB4048 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 96871 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 96810 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 96749 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 96688 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 96626 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 96565 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 96504 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 96443 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 96382 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 96321 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 96260 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 96199 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 96138 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 96077 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 96016 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 95955 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 95894 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 95833 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 95772 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 95711 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 95650 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 95589 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 95528 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 95467 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 95406 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 95345 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 95284 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 95223 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 95162 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 95101 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 95040 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 94979 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 94918 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 94857 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 94796 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 94735 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 94674 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 94613 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 94552 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 94491 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 94430 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 94369 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 94308 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 94250 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //