Array 1 601922-601222 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123034.1 Streptomyces sp. ADI96-02 scaffold001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 601921 29 96.6 32 ............................C GGCTGGAGAGAGGCGGCGAGGTGCACGCGACC 601860 29 100.0 32 ............................. GCGTCGGTCATGAGACCACCGCCTGCCGGTCC 601799 29 100.0 32 ............................. CGCGGTGCCTGATGGCGGCGCAGACGAAGGCC 601738 29 100.0 32 ............................. CAGTGCGCCCAGGCCGCGACCGCCGCCGCGAT 601677 29 100.0 32 ............................. GTCGTTCTCCGACCAGCGGGTCTGGATGACGA 601616 29 100.0 32 ............................. TCGGCGACGTCACGGTGACCGGCGGCCCCCAC 601555 29 96.6 32 ............................A TCGCCGATGGGGCTGTGACCACCCCGAAGGTC 601494 29 100.0 32 ............................. TGTTCCACCACCGCAACGGATGAGAACCGCCC 601433 29 96.6 32 ..A.......................... TTGGAGATGTCGGCACGGAGCCGGACGGTGAC 601372 29 100.0 32 ............................. CCGTTGTCCGGCAGGCGTGTACGCCGGGTCGA 601311 29 100.0 32 ............................. GAGTCCGAGTCTGCCCCGGAGAAGAAGGAGCA 601250 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.2 32 GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : GCGCTGATGTACGACGGATCGTCGCGAACCGGCTTGTAGAGGGAGGGGACCTGGGCCTGGAACGGAGGAGTGATCTTGCCCATGTCATGCAACCCGGCCCAGAACGAGACCACGGCGCGCGCTTCCAGCACGCTCAGGCCGAGCGCACCCGCGATAGCCGCCTTGGTCGCGTCGCTCAGGACGACATCCCAAAGCGCCTGGAACACCGCACCGGTGTCGAGGAGATGGCACATCACGGGATACGGCCGCGACAGCCCGCTCTCCTTCCCCCACAGCCTGACATCCAGAGCACAGTCTCCTGAGGCCCCCGCCTCGTCGCACTTCAGCATGTGACCAGAGATAGCACTCCGCACTGACAACGGCCCCAAATAGCCCAAGCTGGCACCTATATGAGGCCAAGGCCTTACACTCGCTGCGCGACGACAAGGAATCGAGACGCATGCACGCCGACGCTCAGCAAAGAAAAGGCAAAGCGGTCGAGTGAGGCCAGGTCGCGAAGG # Right flank : CCGAAGGGCGTCGACCTCGCACGGGCCATCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCACGGTCGAACTCGACGAACACGAGTCCATCGTGCTCCCCGCGCGAGCGGAAGTGAGCCGGCCTCCGTCCCGAAGGACGGCTGACCCTGGCCCGGTGGCTCGGGCGCTCCCCGCCGACGATCACCCTCGGTTACTATGCTCACTTCATGCCGGAAGCCGGCAGTAAGGGGCGCGGCACCGTCAACGGTCTGCTTGCGGAGTGGGGAGGCCGGCTTGCCGGCCGAAACGCCCCGGAATCTCCCCAGCGCCGATGACCGGTGATTCCTGCCTCTACGCCCCGGAGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [15.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 611631-612086 **** Predicted by CRISPRDetect 2.4 *** >NZ_ML123034.1 Streptomyces sp. ADI96-02 scaffold001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 611631 29 100.0 32 ............................. TAGTCGGCCATGCCCCACGGGGTGCAGCACCC 611692 29 100.0 32 ............................. ATGTCGTCTCGGCAGGGGTAGAACTCGCCCTT 611753 29 100.0 32 ............................. CCCGCCCCCGCCAGCAGGTGGGCCGACTTTCA 611814 29 100.0 32 ............................. CCTCCTACGGGTACTTCGCCGAAGCCGACCCG 611875 29 100.0 32 ............................. GCGGCACGGAAACCGGCGGGGCAGCCAAGCCC 611936 29 100.0 32 ............................. ACGATCAGCAGCCGACACCGAGCGACCGCCAC 611997 29 100.0 32 ............................. GCCTCGCCGGATCGCCTTCTCCTTCTCCCCCG 612058 29 96.6 0 ............................C | ========== ====== ====== ====== ============================= ================================ ================== 8 29 99.6 32 GTGGTCTCCGCGCGAGCGGAGGTGAGCCG # Left flank : CCCCCGCATCGTCACCGACATCCAACAACTCCTCGACCCGGACCACACCTACGAACAGCCCGACGCTGAAGAACAAATGGTCGACCTCTGGGACCCGGTAGCCGGCTCCGTACCGGCAGGCGTCAACCACGGGAAACAACCATGACGCTCCCGGCGGAAGGACACCGGCCATGTCCTCGATGATCGTCATCTCAGCCACCGCCGTACCCGATCACCTCCGCGGCGCGCTCACCCGCTGGCTCCTGGAAGTCACGCCCGAGCTGTACGTCGGCACCGTCTCGGCCAAAGTCCGCGACGAACTCTGGTCGGCGGTCGCCGCCTGCACCAAGGACGGTGTGGCAGTTCTCGCCCACCCCGCCGACAACGAACAGGGCTTCCAGCTACGCACAGCAGGCACCCGCCGCCGCGAACCCATCGACTTCGACGGCCTCACCCTGATCGCCTTCCAACGAGAAGGTCAAGAAATGGCAAACCCCCTCTAACGCCCCAGGTCACGAAGG # Right flank : CGTAGCGAGCCTGCGGAGGTCGCCGTCTCTCCCCGTCGGCGGCCTTCGGCATCCCCGGCCGTGAGTCGACACCGCCCAAACAACGTCAGGGCGTCGTGCCCGCCGGTTCGGCGTAGACGTACTCCTCGATCCCATCGATGAGACCGCCCTCGAACCGGAAGTACACCGCAGCGTGCACCGTGCTGCGGGACCCGTCGCTCATCACCAGGTGGAGTACGTGCTGCTGGAACACCTCGTCCTGGCTCTGGAACTGGCGGATCACGTCGTAGCGCAACGAATCGACGTTCCCGACAAAGGACTTGAACTGGTCCAGGCTCTCGTCGATCGGCTGTTCGCCCTTGCCGTCGTTCTGCCGCACTGTGGCGGCACCGGTGCACATCGCCTGGGCTCCGGAGAAGTCGAATGCCTCCAGGCTCCGCAGAAACTGGTTCACCTGATCACTGACGCCCTGCTCCATGTCGGGTCCCTTTTCGCCGCTTCTCGTTGAGTGCAGTGCTGAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCTCCGCGCGAGCGGAGGTGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //