Array 1 33532-36201 **** Predicted by CRISPRDetect 2.4 *** >NZ_NESC01000010.1 Limnohabitans sp. Jir72 LimC-Jir72-C10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 33532 28 100.0 32 ............................ TCGTTGGCCGCTGCGTTCAGCTTGGCCAGCAC 33592 28 100.0 32 ............................ AACAAAAACGCTGGCCATACTGATAAGCACGC 33652 28 100.0 32 ............................ GAGCTTTACGCGATCTGGCACAAGGGCCACAA 33712 28 100.0 32 ............................ TGCTCGATGTCGAAGTCAAACGTAGCTGCGGC 33772 28 100.0 32 ............................ AGGGGTAGCCTGCCGCCGGGTTGACCGGGTCA 33832 28 100.0 32 ............................ AACTCAGCATTTTTGAACCCGAACAATTCAAG 33892 28 100.0 32 ............................ AATACGCACACGCCACCCTGCCCAACTGGACC 33952 28 100.0 32 ............................ TGAGCATCGCCGTACACCTGAGCATTACCGGA 34012 28 100.0 32 ............................ TTGCCCCACGCCCAAATCCTGCAAGCGTGCTA 34072 28 100.0 32 ............................ AGGTTGTTGCGGTAGCCGCAATACCCGATTGC 34132 28 100.0 32 ............................ AAAGCCTTGTATTCACTGCCGCCATCGCTGGC 34192 28 100.0 32 ............................ GTTGATCTTGCGAGCGCGAAGAACAAGCGTAA 34252 28 100.0 32 ............................ TGGCCAAGATTGCGCGCTACCGCGACATTGTG 34312 28 100.0 32 ............................ AGCATCGCTCCGTGTGCAGCGCTCGGGCGCTA 34372 28 100.0 32 ............................ AGGGAGAAAGGGCAAAGAATCGAAGCCGCTAC 34432 28 100.0 32 ............................ AACATGGTGTCCAGGTCGGCAATGCCCAGCTT 34492 28 100.0 32 ............................ ATCAAGGAGAACCCCAATGCGCCCATTTGATC 34552 28 100.0 32 ............................ AACTGAATGCGTGACTTGCCGTTGTACGTGTC 34612 28 100.0 32 ............................ ATGTACCAACGTGCAGTGGACAAGCTGAAGCC 34672 28 100.0 32 ............................ AATGCTCAGAGACTGCAGCTGCTGGGCAATCA 34732 28 100.0 32 ............................ TCACCAGCCCCGGTCGTCAGCAAGTCATTGAC 34792 28 100.0 32 ............................ AGCACTTTGCCGTCCTCCACGTATTTGTAATA 34852 28 100.0 32 ............................ ATTAAGATGGGCAAGGCACAGGGGCCAGAAAC 34912 28 100.0 32 ............................ GTCGTTTTGGTCTATGCTCCCTTGAAAATGTC 34972 28 100.0 32 ............................ AAACAGACAAGACAAGGGCAAAGCCTGCACAG 35032 28 100.0 32 ............................ AGACTGGAAAGCTCAGGGAGTCCCAAAAATCC 35092 28 100.0 32 ............................ AAGCCCAGGCGGTCTTTCGTCGGGATCGTGTG 35152 28 100.0 33 ............................ TTGGATAAGGCGGCCCTGTGTCGTCGCATCCTT 35213 28 100.0 32 ............................ ATTCGGCGGCGTACAGATTTATCCATCTTGAC 35273 28 100.0 33 ............................ CGCAATCACCCCTGAGCACTTGCTTGCACTTGC 35334 28 100.0 32 ............................ AAGAAGACCTACAGCGCCGACCACATCACCAC 35394 28 100.0 32 ............................ AGCTCGGCCTCACGTTTTTTTAACCAAGCCTT 35454 28 100.0 32 ............................ GTACCAGGCAGCCAGATGGGCGCCAAGTCCCG 35514 28 100.0 32 ............................ ACGGCCCAAAGGCCGATCAGTGCCAGCACGCC 35574 28 100.0 32 ............................ CAGTGGATGCCAGAGCTGCGCGCACTCACCAA 35634 28 100.0 32 ............................ GCCAAGCCACATTCAATGCCACCGCCACCGGC 35694 28 100.0 32 ............................ CACGGGTCAGGCCACAGGCGCGGCGGTCGTTC 35754 28 100.0 32 ............................ TTCATCGACCACGGCCACATCAGCGCCACGGC 35814 28 100.0 32 ............................ AGGGAAACACCACGGCCGTGATCAGCAAACTG 35874 28 100.0 32 ............................ TCGTCTGCGCCCTCGTCTGCATCCTCTGCAAT 35934 28 100.0 32 ............................ CAGTGCTACAAGCACAAACCCCAATCAGACAA 35994 28 100.0 32 ............................ TTGGGAGATTGCTTTGGGTCGTCTTGCATGAT 36054 28 100.0 32 ............................ TTGGTCAGCTGGCCCAGGCCTGCGCCTTCTTC 36114 28 100.0 32 ............................ AAACAGGTCGGCCAGTTTGCTGGCGGCATCGC 36174 28 96.4 0 ....................T....... | ========== ====== ====== ====== ============================ ================================= ================== 45 28 99.9 32 GTTCACTGCCGCATAGGCAGCTCAGAAA # Left flank : AGGCGCTGCACGCACTGCTGACCACGGATTGGCTCACCGGCATGCGCGACCATGTGGCGTGTGGCGCTGTGTTGGCCGTGCCCACCGATGCCCTGCATCGCGTGGTCAGTCGTGTGCAAGCCAAAAGCAGCCCCGAGCGCTTGCGTCGCCGCCAAATGCGCCGCCATGGCCTGACGGAAGAGCAAGCCCAAGAGCGCATCCCTGACAGCGCATCCGAAATGCTGAACCTGCCATTTTTGACCCTGCGCAGCCAAAGCACGGGTCAAACTTTTCGGCTGTTCATTCGTTTGGGATCGGAACAGGCCGCAGCCGTGCCAGGCGAGTTTGGTGCGTATGGTTTGAGCCCGCAGACCACAGTGCTTTGGTTTTGACCCTTTTTTTCGGCCCCGCTGCAAGTCTATATAAATCAAGGACTTACAGTGGGATCGAAAATTTGGGTGCTGAGCCCCTTTTTGTTCAAATCTTCAGGTCTGACAATGGGTTGGGGATAATTGAGTGCT # Right flank : ATCAGTAGCGTTTTTGTACGTCAAGTGCGCTCACGCCTGCGCCGCCTGCTGCGCCTTGTAAACCAGCTTGCGCGCCATGCTCCAGCGGTGGACTTCGCTGGGGCCGTCGTAGACCCTGAAGGCGCGCATGTCCATGAAGATGCGCATCACGGGCGTTTCGGCCGTCATGCCTTGGCCGCCCAGAATTTGCACACACCGGTCCACCACGCGCCATTCGGCTTCCGAGCAGGCCACTTTGGCGCGGCTCGATTCGTAGCCGCCTTTTTGGCCTTGGTCCAGCAGCCAGGCGGTGTGCCAGATGTGCAGGCGCGCGGTGTGCAGGTCGATGTCGTTATCGGCCAGCATGAAGCCCACGCCTTCGTGTTCGGCCAGCGGTTTGCCAAAGGCATGGCGGCGGCTGGCGTAGTCCAGGGCGATGTCGTGTGCGCGGCGGGCCTGGCCCAGCCAGCGCATGCAGTGCGTCAGGCGCGCCGGTGCCAGCCGCACCTGTGCATAGCGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //