Array 1 190445-194383 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACYYI010000007.1 Acinetobacter baumannii strain DSM 30007 NODE_7_length_255792_cov_104.630892, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 190445 29 96.6 31 ............................G TAACGCTGGTACTCTGTACGTTCTACGTTAA 190505 29 100.0 31 ............................. TCAAGAGAAGTTTTATAGTGTTCGTGTATCT 190565 29 100.0 31 ............................. TTCACTGGATTACGTTCTAAGCCTTCCTGAA 190625 29 100.0 31 ............................. ATAAGCCTTATGAGGTAGATACTTCAAAAAT 190685 29 100.0 31 ............................. ACTCGGTCACAAGGCGTAGTCTACGGTTTTT 190745 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 190805 29 96.6 31 ............................T CAATTGGAACGATATCAGGCTAATAACTACG 190865 29 96.6 31 ............................G GTACAAGCCATCACATGTATCTGCTAGTTCA 190925 29 100.0 23 ............................. ACACATGCCAGATGGTTCAAATG Deletion [190977] 190977 29 96.6 31 ............................G TATCGATACGCCAATGAAGCTATCAGAGTTC 191037 29 100.0 31 ............................. GTAGGAAGCTCTACATCTAGTTTTAAATAGG 191097 29 96.6 31 ............................T ATGAGTGAGGGAGTAGCAAATGTCTGAACAA 191157 29 100.0 31 ............................. AGAAAGCTGAGCAATTGCCTGCTTTGCCTAT 191217 29 100.0 31 ............................. ATCCCATTAAAGAAATCATTTTGGTCTTGGA 191277 29 100.0 31 ............................. AGATCAGAGGCACCAAGCAATGCAGACTCCC 191337 29 96.6 31 ............................T TTACCCTTGCCATGCTTGCCAGAATTAGAAT 191397 29 96.6 31 ............................T ACCACCCATTGAACGTTAGCCATATGAGCAA 191457 29 96.6 31 ............................T TCCATGCTTCACATAGAAATTCATTGCAAGT 191517 29 96.6 31 ............................T ACTGCTTCCCAAGTCAGTAAAATGATTGTTA 191577 29 100.0 31 ............................. CAGTAGTATCATTTCAATCGAGTAACGTTGA 191637 29 100.0 31 ............................. AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 191697 29 96.6 31 ............................T ACACGGCGATCTTGTTTAATAGTCTGAGTTT 191757 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 191817 29 96.6 31 ............................T AGAAAGCTTGGAAAACAAAGGTGACTGTAAT 191877 29 100.0 31 ............................. GAAACATCTGTTATTTTTATTGATGAGGTAC 191937 29 100.0 31 ............................. CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 191997 29 100.0 31 ............................. TTCACCAGCCTCGGCTAGACTTGATGCTCCT 192057 29 100.0 31 ............................. AGCAAAATTCAAAAGAATTACCCCAGCCAAG 192117 29 96.6 31 ............................T TGGTGTGCCTGCGCCCACTCAAGCCATGATT 192177 29 96.6 31 ............................T TTAACCGAGATCAAGAAGTAATTGCTTGGGC 192237 29 96.6 31 ............................T ACAATACGACGTGATAATGCAACTAAAGCCC 192297 29 100.0 31 ............................. CGGTAAAATTAAGTTACCTGCTAAACTTGTG 192357 29 100.0 31 ............................. ATCAAAGCCTTAATCGCTAAATCAACTGCTA 192417 29 93.1 31 .............C..............T TTTGTTTATACGGTTAATAAATCAGTACAAT 192477 29 100.0 31 ............................. TTACACAGGCATGGCAATGAAAGTGTTCTTT 192537 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 192597 29 96.6 31 ............................T TCATCTAAATGTTTTTGACGTTCAGCTTCAG 192657 29 96.6 31 ............................T AGACAGCTCATTTAATCCGGGTGAGAAACAG 192717 29 96.6 31 ............................T AGATAATGTTGAATGGGTTGAAACTACCTAC 192777 29 100.0 31 ............................. GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 192837 29 100.0 31 ............................. TTACCCCTCCTTACTTTCTGCTTTAACTTCT 192897 29 100.0 31 ............................. AAACACCAAGCCATAAAATTAATTACAGCAA 192957 29 96.6 31 ............................T GTTTTGCTAATTTATCAATATCGATTTTCAC 193017 29 93.1 31 ...AC........................ CAGGGGTCAAGTTCAGAAGATTTACGTTACA 193077 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 193137 29 89.7 31 ....C.......G...............T TAAATGCTCAACTATTTCTGTAGCTAATGGA 193197 28 82.8 31 ...GC....T...-..............T TCAAATGATTTAATGAGCTTGTAGCCATTTT 193256 29 89.7 31 ...GC.......T................ CGTCTTCTAATGATGGACTTTAATCCAATAT 193316 29 82.8 31 A..GA.......TC............... TCTCACTGAAGATATGACCATCACTTTCTTC 193376 29 82.8 31 ..CGC.......CC............... AGCCATTTACTTTGATAAAGCGTCACATAGC 193436 29 96.6 31 ............................T AGGAAATTCTATCGGCCCAGCATCTACAAAT 193496 29 100.0 31 ............................. AGAGACACATCGTTAATAATCTCTTGTGCGG 193556 29 100.0 31 ............................. TGAGCAAATTATCAATTGATCTATCTGCAAG 193616 29 89.7 31 ............CC..............T AGACGGTGTTACCTGTAGGCGGTGTCTACTG 193676 29 89.7 31 ...TC.......C................ TCGTTTGAATAATATGGACAATCCAGCCAAT 193736 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 193796 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 193856 29 89.7 31 ....G.......C...............T TCATCACGTAGCCTTTTACACGCATCTTGCG 193916 29 93.1 50 ....................C.......T GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 193995 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [194019] 194055 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 194115 29 89.7 31 ...GC.......C................ TTATCCAGATAAAACCATATCTACAAAGTGG 194175 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 194235 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 194295 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 194355 29 75.9 0 ....G....T...C.A........AT..T | ========== ====== ====== ====== ============================= ================================================== ================== 66 29 94.5 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCAATTGAACTGATAAAACAAATAATTGTTTTTTAAAGTTAATTTCAATTCAAAAAATAACAGTGTACACAATAGTGTACAAATTATTTGTTACTAGGGCATTTCTCTGAGTTTAGTTGTCATGCTGGGTGACGAACTCAGGAGTTAAAAACACTCCTTTTAGTGGATCGGATTATGAGGCTCGTTATTTGGCTTCAATAAATTTATTGAGCGCAAAACCATATTTGGTGATTGGATTTTAAATCTTGAATTAACTTAGCCGTTCAAGTGGCTGATTAAGTAGCTTGGTCGCGTTTTAAGTGTGAGCAAGTTATAAAAATCACGAAATACTTTCGATTGCAGATACGTGCATCCAGTCGCGTGTACATTGCCGAAGTTGAGGATTTAGATGGTGGGGGGTATCCCTATGTTCAGGTTATTTGCAGAAGTA # Questionable array : NO Score: 5.56 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.52, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-50] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //