Array 1 73001-73578 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKGV010000027.1 Methylobacterium sp. DB0501 contig27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 73001 28 100.0 33 ............................ CGCGGTCGAGAAGCCGGTGTAGAGCGTGCGGAG 73062 28 100.0 33 ............................ GGAGAAGCGCTTCTCCGCGCGGGCGCTCGCCCT 73123 28 100.0 33 ............................ CGCGGTCGCGATGTCGAGCTACGCTTCCGCCGT 73184 28 100.0 33 ............................ GGTGTCGTTGTCGTCTAGCGGTTTCATGAGATC 73245 28 100.0 33 ............................ ACGGACATGCTCGATGCCAAGACCTGCATCGTG 73306 28 100.0 33 ............................ CAAGCGCCGGGACAAGGTCGCGAAGACCGAGCA 73367 28 100.0 33 ............................ CCCGAGGGTCTGGTAGCCGCGCGAGCGGTCGGG 73428 28 100.0 33 ............................ CAGCTCCGGGCTGGCCCCCTTGGACAGCGCCTC 73489 28 100.0 33 ............................ CGAGATCCAGGATCTGATTGAGGATCTGGAGCG 73550 28 100.0 0 ............................ | G [73576] ========== ====== ====== ====== ============================ ================================= ================== 10 28 100.0 33 GGCTCCCCCGCATCCGCGGGGATCGACC # Left flank : GTTCCAGGTCTGATCGACGTGATCAAGTCCGTCCTGGTACCTCGGGAGCAGGAAGACGACCCTCAGGCCGAGGTCGGTCCGACGACCGACCCCGAGCCGTCGTGAGCGCGACGAGGAGAAGGTTATGCCGCTCTGCGTGGTTGTCACCCGCGATGTCGAGGATCGCTATCGGGGCTTCCTCGGATCCGCCATGCTGGAGCTTGCCCCGGGCGTCTACGCCTATCCGCGCATGAGCGCGAGCGTGCGCGATCGTGTCTGGACCGTGCTGTCGGACTGGTACGGCCAGCTCGGCCGTGGCAGCATCGTGATGACCTGGGCAGACACGGCCGCGGCAGGCGCCCTCGGCGTTCGCACGCTCGGTTCACCGCCCAAGGAGGTGGTCGCCCATGAGGGCGTCCTTCTCACTCGCCGTCCACTGGGTCGCGGAGCGGGGATGCCGCCCCCCGTTCAGGAGGCGGGCTCTTTGATAAGTGAATGATGTCAATATATTGACTGGTAGA # Right flank : CGATCGCCGCATCCCCCCTCCGCCGTGGCATCGACGGTTCCCCCGTATCCACGCAGAGTGAGCAAGGACCAAGGGGCAATCCCAGTCCGGCGCTGCGAGGCGGCCGACTGCCCTCGCTTCTATGAGCCCTATCGCCCAGACGCCGAAGGCGCGCTCGCCTTACCGTAGCGCGAGTTCGGCCTCGACGTCGTGGCGCTGCCCGGCGCCCTGTGCCACCGCGAACATCGCTCGGTCCCGGAGATCTACGACCTGCTGCGGGGATCGGTGCAGTTGATCGCCGGCGTCGTCACCCGGGCGCCGATCAGAGCCGCCGAGGACCTCGGCCAAGTCGACTATAGCCGCTGGCGCGATCTGCGTTGCTCGGTCGACCGAGGGCGGCAGACCCGGGCAGCCCGCACCCGCTACCGCCACGATCGCGACGCCTGCCTCGCAGCACTCGAAAGCCAAGGTCACCAGCAAATTTTGCCGTATTAAGAAAAAACAACTTTTTCCGGAAAAGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCATCCGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 80886-78841 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAKGV010000012.1 Methylobacterium sp. DB0501 contig12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 80885 28 100.0 33 ............................ TTCCCTCCGGAGCGGCCCGATCCGGCCCGATGG 80824 28 100.0 33 ............................ CTGGGCGTTGCGTGCGTGGCCCAGCGCGATGTT 80763 28 100.0 33 ............................ CCCTTGCAGCCGCTGCGTCATCCGCTCGATCTC 80702 28 100.0 33 ............................ CTCGGTCATGGACCTCTCGTCCAAGACCACGAA 80641 28 100.0 33 ............................ CGCGCAGCAGGCTAGCGAGCGTGGCCGATTGGT 80580 28 100.0 33 ............................ GCCTCCCCTCGCGCCGAGGCGTCGGGCGGGTCC 80519 28 100.0 33 ............................ TTGACAGCGGCGGATCGTCAGGACGGCCGGCGC 80458 28 100.0 33 ............................ CCGGAAGCGGAAGATGACGTGCCGAGAGCCAGG 80397 28 100.0 34 ............................ CCTCGTTCGCGACAACGACAAGCTGACGGCCGAC 80335 28 100.0 33 ............................ GTCGAGATAGCCGAGATAGATGCCAACGGCGAA 80274 28 100.0 33 ............................ CGCAGCGGCCCCGGCCGATCGCGAGAAGCTGGT 80213 28 100.0 33 ............................ CGCCTTCTACACCATGGCCCAGGTCTACGGGGT 80152 28 96.4 34 ..................A......... CTTCTCCAATCTCCCGTTCGAGTTCACCCCGATG 80090 28 100.0 33 ............................ GTGGCCGTGGCGGGGGCCGACGGTGGCCAATGA 80029 28 100.0 33 ............................ TTTGGCCCATGGTCCCCGGATCGTATTCGAGGC 79968 28 100.0 33 ............................ CGAGTACCAGAAGCCGCGCTCGCGATCGATGCG 79907 28 100.0 33 ............................ CCAGAACAACAATCCGTTCTCGTCTGTCCTTTA 79846 28 100.0 33 ............................ CGATGTTGACGCCGGACGGTTGGGTGTACTGGC 79785 28 100.0 33 ............................ CTGCTCCGCCACACGGCGGGCCGCCATCGCCTT 79724 28 100.0 33 ............................ CTGCTCCGCCACACGGCGGGCCGCCATCGCCTT 79663 28 100.0 33 ............................ TTGAGCAGGACTTCTCGCGTCCGTGGGTGCAGA 79602 28 96.4 33 C........................... CCGACGATGGCGGCCAGCCTGCTGGCAATCCTG 79541 28 100.0 33 ............................ CGGCGGGTAGGCGCGGCCGGGTTCGCATGGCTC 79480 28 100.0 33 ............................ GCCTCGTGGTTAGCGGGATGGACGGAGGGGGAG 79419 28 100.0 33 ............................ CCGCCGATGTTCACGCCGCTGTTGGCATTGGTG 79358 28 100.0 33 ............................ CCTGAGCACCCTCGGCGACATCGCGGCGCTGGT 79297 28 100.0 33 ............................ GTCTTTCCGCTCATCGCTCGCCGATTCCCTCTC 79236 28 96.4 33 .........................C.. CCCTTCGATCGGGTCGCCGTCGCACTCGCCCTC 79175 28 100.0 33 ............................ CACCGTCGGCTCACCGACCTCGACCTACGTCGA 79114 28 100.0 33 ............................ CGCCCACTTCCACGCCTGGACTGGGAAGGATCT 79053 28 100.0 33 ............................ CGAGCGCACGGCGGGCTTCTTCAGGCGGTAGCG 78992 28 100.0 33 ............................ GCACGACGTCGACACCCTCCGCGAGGCGGTGAA GC [78973] 78929 28 85.7 33 ....T......A...........A...T CTGATCGGCCTTCGCCCGGGGCTACAATGGTCC 78868 28 82.1 0 ........T..C..CA.......G.... | ========== ====== ====== ====== ============================ ================================== ================== 34 28 98.7 33 GGCTCCCCCGCGCATGCGGGGATCGACC # Left flank : AGCCCCTGCCACCAGACGGCCCGGCGCCGCGAGAACCCCCTCACGTCCTCCCGCCGCACCGGCGGCAGGTGCTCGCCGAAGCGCGCGCGATAGGCGGCGTAGAGGTCGTCGCGGTGCCCCCGCTCCTCGTCGGCCATCGCCTCGAACAGCCCGGCCGAGCCCGGCAGCTCGGCCCGCAGGCTGTCGGCGAAGCTGCGATAGATGCGGGAGTCCTCCTCCTCGCTGGCGATGGCCAGCGCGAGAACCTCGCGCTCGGTGAGATCGGTCAGGGCCTTCACGGGCACGCTCCTGTTTGGAATGGATCCAATCTATATATTTGAGTTATTCCAAACAAGGGCTCGTTCTCGGTTGGGGCCGGCCGGCTGCCGCCCGGCCGGGTGCGCCCCCTCGACGACGGCGCTCCGGTCCGGCATTCTGGCGTGGAGAGGTGTCGGGTTTTCAGCCCTGCGTTGACGTCGTTCTTTGACATCGTGAACGGTACCAGCTACTTAGCTGGTAGA # Right flank : CGGCGCAGGCATCGGCTGGCGGCTGGCCTCTGTCGCTCCCCTGCCGCGCGGGGATCCCGCCGCTCCCCGGGGCGCGTGCGGCACCACACATCGCCGCCGGTCCTCGCCCCCTGCCGGCGGTTGCCTCGCGGGCTCGAACGGAGCATGACGGCGCCCGGATTCGCGGGGGGCCGCGCGCCTCGTCTGGGGCGAAACCGCCGCGTCCCTCTTCCCGCGTGTCCCGTCCACGAAAGGCCCGCACGAAGTGCCCGCATGAGCGTCGTCACCCGCATCGCCCGCAGCCGGGCCGCCCAGGAGAGTCTCGGCGCCCTCGGCGCGGGCTACCTGAAGCTGGTGCGGCGCACCAACCGCTTCAGCCTCGATCCGCCCGAGGCCTATGACTGGCTGTCGCCGCTGCGGCCGTTCATCATCGCCATGTGGCACGGCCAGCACCTGATGGTGCCGTTCGTGCGCCGGCCGCAGGACCGGGCCGCCACCATGGTGTCGCGCTCGGTCGACGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCTCCCCCGCGCATGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //