Array 1 515986-517600 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP041336.1 Neptunomonas phycophila strain Scap09 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 515986 29 100.0 32 ............................. CTACCCCCTCGGACGGCGGTTGCTACAACTGA 516047 29 100.0 32 ............................. GCACCATCAGAATAAACATCCACATATCGAAA 516108 29 100.0 32 ............................. GAGTTAGTGGATGCGGGTATGTTCCAGACCAT 516169 29 100.0 32 ............................. GGTTTTTGGATTGTTTGTTTTTACGACGACAT 516230 29 100.0 32 ............................. AGAATAGAGAAAACATGGGGGCATCTTGGAGA 516291 29 100.0 32 ............................. GTTTGGCTAAGCTTAATACAGCGAGAAAAATT 516352 29 100.0 32 ............................. CGTCGGGCTTGCCTGTTTTATGCCTAACTAAT 516413 29 100.0 32 ............................. GGAGCAACGTAACGTAACCAGTTTAAAAAAGG 516474 29 100.0 32 ............................. CTCGATTGTTGTTCAATTTGCGCTCTAAAATG 516535 29 100.0 32 ............................. GTGAATCCCGCACACGGTCTTATCTTGATGAG 516596 29 100.0 32 ............................. CTTTCGCCCTGTCAGCTTGTGCGCATCATCAA 516657 29 100.0 32 ............................. TAATCTAGACCTAGCTGTAGTTGAAGAGTACG 516718 29 100.0 32 ............................. GATTCGTGGTTTAACCCCGTTCGCCCTTTACC 516779 29 100.0 32 ............................. GTGATTATGTGTGGGCATTATGGAGACCTTAT 516840 29 100.0 32 ............................. ATTTTGACTCTGGTCTTGGTGACGGTTCATGT 516901 29 100.0 32 ............................. TTGTCCGCTAATTCTTGTTCGTTAATAGTTTC 516962 29 100.0 32 ............................. AGTGATAACGCTGAGGCAATATCAAAAATTTC 517023 29 100.0 32 ............................. TTTGCGTATTCTGGGATAGCCTCTAAAACGGA 517084 29 100.0 32 ............................. AACAAGACGAAGGACAATAGCAGTGCCAATCA 517145 29 100.0 32 ............................. CGCAGGGCTAACAACTGCGCACGTGGCCCCAC 517206 29 100.0 32 ............................. CCCTAGTTCTCTTATTGCATGGTTGCGCTTCG 517267 29 100.0 32 ............................. AGGGCTACTTTAGATGGTGGTTAGCTAACAAA 517328 29 100.0 32 ............................. GAAAAACCCCAACATCACAACCACCCGAAAAC 517389 29 100.0 32 ............................. CCCTCATAAATCGCGTTACAGCGAGGGCATTT 517450 29 100.0 32 ............................. CCCTCATAAATCGCGTTACAGCGAGGGCATTT 517511 29 100.0 32 ............................. GCTTGCGCTACATGGCATGCCATATCGCCAGC 517572 29 89.7 0 .......T..................TA. | ========== ====== ====== ====== ============================= ================================ ================== 27 29 99.6 32 GCGTTCCCCGTAAGCACGGGGATGAACCG # Left flank : CCGCTCATTGAAGAAGTACTCGCGGCTGGAGAAATTCAGCTGCCAACACCTCCCGAAGATGCACAGCCGCCCGCTATACCTGAACCCGAGTCGATGGGTGATCAAGGCCACAGGAGCAAGTAAGAATGAGTATGTTAATGGTTGTCACTGAAGCAGTACCTCCCCGGCTCCGGGGGCGGCTCGCTGTTTGGTTATTAGAAGTCAGGGCGGGTGTCTACGTAGGTGATGTTTCACGGCGAGTACGAGATATGATCTGGGAGCAGGTGGGCTTTCTGGCAGAAGAAGGTAATGTTGTGATGGCATGGGCCACTAATACAGAGTCTGGATTTGATTTTGTGACGCATGGTGATAATCGGCGAATGCCAATCGATTTTGACGGTTTAAGGTTAGTTAGATTTTTGCCTGAATCTGATCAAAGATAATGATGTATCGCTCTTTAAAAAGTTGGTAGAAATATCAAGGAGCTATTTCTCCTTGTAAAACAACTCTGTATATTTAGA # Right flank : GGGGGTGGCGTATCAGGTCGAGAGGACTTTGAGTGTCACCCTTAAAGCATGGGCGATTGATAAGTTTGTAACCTAAAGCCGAAGGCCTTAGTATTGAATTTTTTAAATCAAGGAGCGATTTAGATGGCGTGGGAATTTATCCGTGTAGTCCGGGATGAGTATAAGACTAGTGATGGTTGGGGGAAAATGTACATTCGCACGGAGGGTGGGGAGTTTGAATGGCTTTGTTTTTCTTATGAACTTCCTTGGACTGTCTTTTCTTCCGGTACTAATGCCGGTCGTTCTAGAAACAACCTAAGCCGTATTCGGTTAGGTTCGTATGAGTTGATGCCAAGAGCCGGCGGTCCTAAAGGTTGGAGGCTTGAATTGCAAAATACGGGTCATCGCTCCAATATTCAAATTCATCGTGCCCATCGTTCTATGTATATAGAAGGGTGTATCTTGCCAGTGCATTTTAATGCCCGCTCTGATGATTTTTTACAGAAAGGATCGGCAATGAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGTAAGCACGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGTATGCACGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //