Array 1 70827-68406 **** Predicted by CRISPRDetect 2.4 *** >NZ_LSIZ01000139.1 Streptococcus sp. CCH8-H5 CCH8-H5_contig140, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 70826 36 97.2 38 .............A...................... AGTCGGCTATGGAAACCGCCTAACGAAGCCTATCCATC 70752 36 100.0 36 .................................... TTGATGGTTATTATTGGTCAACATCATGGAGACTTT 70680 36 100.0 31 .................................... CGTAACAAATACTTGCCATAATCATTCTTGC 70613 36 100.0 38 .................................... TTTTGACTGGGAGTCAAAGTAAATTCATAAAGTTTTGT 70539 36 97.2 36 .............A...................... GGAATATCCGGGATGCCTCCTTGGAACTCTGGAATG 70467 36 94.4 37 .....T........A..................... GCCTGCACCTTTCTATTCGTCTCTGCACGGTCTAAGT 70394 36 97.2 37 .....................G.............. TTTCCGTTAAAATTAATAATATTCTTGTGGATTTCTC 70321 36 94.4 39 .............A...T.................. ATATCATTTGTTTAGGTACTTAATACCTAAGATGATTAG 70246 36 88.9 36 .T...........A........T............T ATGCCATCTTTATCTTTATTTAATTTATTTAAATCA 70174 36 91.7 34 ..............C..........A.....A.... TCGTTGTCATTTATTTCTTCCTCCATGAATGTTT 70104 36 97.2 36 .............T...................... TCTGCGATGTCCCCTGAGATGATGAAGTCATCTACT 70032 36 94.4 37 .............A..................T... AAGTCTAGATTAATTCCTGTTACGCTGATTAAACCTG 69959 36 97.2 39 ...................T................ GTTCATGTTCAATCGTCCTATCCCAGTTTTCGTCTGGGT 69884 36 94.4 37 ..............C......C.............. TCTGTCAAATCATCATCCTCTTGTCTTGTTGCGTTTT 69811 36 88.9 35 .........T...A...........A......T... CGACCAGTAAGTGAAATTAGGTTTTGGAATGACAT 69740 36 86.1 35 .............A...T...C....A.....G... TTTAAAAAGATTTTGTTAGCGATTTAAAGAGATTT 69669 36 91.7 36 ....C.......C...................T... TAGAAGAACGCACCGTTTTCTTTAGCCTCGCGTGCG 69597 36 88.9 37 .......C..A..TC..................... AGTGCTAGCATTAGGGTCTACAGAGTAGTAGCGATAA 69524 36 91.7 38 .............TC......C.............. GGAGGGTAGACATTAATTAGGGCAACATTATATGATTT 69450 36 83.3 34 .......C..C..A.T......A............A CCAAATTTCGCAAATTTTTTAATATTATTGTTAG 69380 36 88.9 36 ........T....A......T...........T... TTTGCGCGACGAGCTTCAGCTGTTTCTTTTGTTTCA 69308 36 88.9 33 .............A.......CA.........T... TTTGGCACGAATTGGTCAATGTCACGGAATGAG 69239 36 86.1 36 .............TC......C...A......T... TTTGTACCTAGATAAAGCAGAGTTGCACAGTTATTT 69167 36 83.3 35 C..........T.T.......CT.........T... TCATGTTATAATCTCCTTGGATGTTATTTCTAGCG 69096 36 94.4 36 .....................G..........T... TTGCAACCACAAGGCTTTCTGTTTTTTAGTCATTGG 69024 36 94.4 37 ........A....T...................... CCCATAAGTGCATTTTCAGCGTCGTGGTAAGCAACGA 68951 36 97.2 34 ...............G.................... TCGAAATAGACGATTACTTTATATTTCATAGTTC 68881 36 91.7 35 .................T...C..........G... ATACGCATGCTCTTATCTTCGCAAACTATTTTTTT 68810 36 91.7 36 ............C.....C.T............... TAAAACTTATCTCCGTCAATCCTTTTGTTGATGACC 68738 36 91.7 39 ..............C......C........A..... TTAGCGAGTTCACCAGTGACACCGATGTACATACCTTTT 68663 36 94.4 38 ........T....A...................... CCATTTAAAGATCCATCATTTTTACCTCCGCCAACTGG 68589 36 97.2 39 .............A...................... TCGATGTTTGAATCACCGTGTGGATTGTTAGGATCTTTA 68514 36 88.9 37 ....C........AC......C.............. ACTGCTGCAACTAGGACGATGCCATATTTTGCAATTT 68441 36 80.6 0 .......C......................TTTTTT | ========== ====== ====== ====== ==================================== ======================================= ================== 34 36 92.5 36 GATATAAACCTATCTACCTCGAGAGGGGACGGAAAC # Left flank : AGAGTTTGATTAGGGCTTTTAGAGAACTTGACCCTAGTCTGTATGAGACAAGTTACACAGGAGGGCATTAATGGGACTTTACTTTAATCTCAGCGAAGAAGAGCGTGAGTTTGCCAAACAAAAAACCATGTTTTGTCTGATTATTTATGATATTCGAAGTAACAAACGTAGACTTAAACTCTCCAAATTACTTGAGGGTTATGGCGTGAGGGTGCAAAAATCCTGTTTCGAGGTCGATTTGTCAAGAAATGATTATCAGTCTTTCCTTAAGGATATCGAGGGCTTCTACAGGGCTGATGAAGAAGACAGCATAATCGTATATGTGACAACTAAAGAAGAGGTGACTAGTTTTAGCCCCTACCATAGTGCCGAAAAATTAGATGACATTCTCTTCTTCTAAGCCTTTATAGGCCTTCAATCATATGGTACAATATAGGTAGTGTTTCCAGTAGGTCCTACATCTTGTGTCTCTAGTAACTGTCTAGAGCACAAGATATGGG # Right flank : GAAAATTTCGAAAACAGTCTTGACACCGCTTCCAGAAAGTGTTAGACTAAAAGCACATTAAGGGCGCCCCAATGAGGTGAAAAGTACTTTCAGCTATTGGGTTTTTTTCATACAAAGATGAAGGAGTCGAATGAAAAAATTAGTATTTACTTTTAAAAGGATCGACCATCCTGCACAAGATTTAGCTGTTAAATTTCATGGCTTCTTGATGGAACAGTTGGATAGTGACTATGTTGATTATCTGCATCAGCAGCAAACCAATCCCTATGCAACCAAGGTAATCCAAGGAAGAGAAGACACACAGTGGGTCGTGCATTTACTTACAGATGACCTCGAGGATAAAGTGTTTATGACCTTATTAAAGATTAAAGAGGTGTCCTTAAACGACTTGCCTAAACTCAGTGTCGAAAAAGTTGAGATTCAAGAGTTGGGAGCAGATAAACTGTTGGAGATTTTCAATAGTGAGGACAATCAAACTTACTTTTCAATCATTTTCGAAA # Questionable array : NO Score: 5.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.13, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATATAAACCTATCTACCTCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [34-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //