Array 1 39180-38812 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKF01000019.1 Prevotella aurantiaca JCM 15754, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================== ================== 39179 37 100.0 29 ..................................... CTCTATAATAACATCATAAATTTTCATTC 39113 37 100.0 30 ..................................... TTATGACGGATAGCACAGATGGCGGTGAGG 39046 37 97.3 29 A.................................... TTTCATATTCCTTTTGGTTTTTAGATTGC 38980 37 100.0 29 ..................................... TACACTCAAAATATTCATCATTCAAATCA 38914 37 100.0 29 ..................................... GAACTCCGAAAGATACTTTGTTATCTAAT 38848 37 94.6 0 ...........................C.C....... | ========== ====== ====== ====== ===================================== ============================== ================== 6 37 98.6 29 TGTTGTATCTGCCTTCTGTTTGAAAGGTAAAAACAAC # Left flank : ATTGAGAATATTGAGCGTGCAAAATATGAAGCCATATTAAAGGCACACCAAAGCATTTATAAATTGCTTAGGTTTACCACTGATACAGAAAACGACGACTGCATTTTATTATGGGAGCAATCTAAAGGCAGCAAAGAGAAAGTTTATTACTTCAGACAAGCCAATATACGTAAGTTTATAAAAGAATTAACCGAAGAGATATACAACAAAGGCAATGGTATTTATCTATCGAAAGAGGTTATTTTGCTGGTATTCAAATATAGAACCCTTGTTCATAAACTTCTGCTTGCTGAAAAGAACAACCCTGATGAGAAAATAATGATAAGTAAACAAGAGATTGCAAAGAGTATGATAGAAATTCATCAGAGTCTCTCAATACAAATCAGAAACGATATAAATTTAAAAAAACGAGATTTATGTTTAAATAGTGAGAATACATAAGAAGAATATTAGAAAAGAAAGAAATAAAATATATAATAATCAGACAGTTAGGTTAGGTA # Right flank : TTATTAACAAGTAAGTGTACAGAATGGGGAGGGTAAAAATAAATTAGGAAACATGCCTTTCAAGGAGAGAGAGAAAGGCAAGAAAAGTGGAAATAGTTTTCACAAGCAAAACTGTTGATAATTATTTCGTTATCAGTTTATTGTGAAATCTGGTTTTTCATGAGAAAGCACAGAACATACATAATACAAAACCGCCTCTTTTGAATTTCAAAAGAGGCGGTTTTGTGTCGTAAAATAGGCATTCTTGCGCTGCTATTTAGACACTTTTAAATGCAAAAAATACTATTGAAAGCTACATGTACATTCGTTAAAATATAAGATCCTTTTTAATTGTTTTGAAAGTATGCCGATATGCCGTATTGTTTTACGATTTCATCGTATATCTTTGTCTGTACAGAAACCATAAGGGACTTATCGGTATTGGAATATTAGGACAAAGATCCCGTTAATTCAGCACGCCAATGATTGTTCCACGCATCTTCGATGGTATTCGAATAGTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTGTATCTGCCTTCTGTTTGAAAGGTAAAAACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.50,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 2461-1803 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKF01000012.1 Prevotella aurantiaca JCM 15754, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 2460 47 100.0 30 ............................................... GAGAATGAAACAACCGTAAAGTTAGCAGTT 2383 47 100.0 29 ............................................... TGTACGACCTCTTCGAAGATGTATTGATA 2307 47 100.0 29 ............................................... TAAGCCCTGCAGCGGTAGACCCTAATTTA 2231 47 100.0 29 ............................................... TATTCTGATAAATATGGCGTTGATATTGA 2155 47 100.0 29 ............................................... TCGGTATTTCTAATGGTAGTAAAGATGCG 2079 47 100.0 30 ............................................... GGCGGTAACTATATAGCAGATACAGAGTGG 2002 47 100.0 30 ............................................... ATGCGCAGATCTTTCTCTTCACGTTCGTTC 1925 47 100.0 30 ............................................... TGCTGCGGCTTTCTGTAACCCCAAATCTGT 1848 46 97.9 0 ...............................-............... | ========== ====== ====== ====== =============================================== ============================== ================== 9 47 99.8 30 GTTGTGTTTGCTAATGCAAAGATACTAATTTTAAAGCTAATCACAAC # Left flank : GAATTAAGAAGAATGGCTTATCCAGAATTATAATGCAAATGAGTGGAACAATATAGGTTTAGTCAATATAGAAGCATGTGGTTAATGGTGTTTTTTGATTTACCCACAGATACAAAGAAAGAACGAAAGGCTGCTACTCTCTTTCGTCAGAACCTATTAAAAGATGGGTTTACAATGTTTCAGTTCTCTATTTATATACGCCACTGTGGTAGTAAAGAAAATATGGAAGTGCATATAAAAAGAGTTTCTACCTTTATTCCAACGTACGGAAAAGTTGGAATTATGGGAATAACAGATAAACAATTCGAAGAAATAAAGTTATTTTATGGTAAGAAACCACAACGCCCCAATGCGCCAGGAGTACAATTAGAACTCTTTTAGCCCTCTGTTAGAAACAATAAAGTTCCATTCATTGAGAATGGAACTTTATTTTTCTTGCATTTTTCTTTCTCTCTAAACCTTCGTAATGATGCTGAATATCATTGCTTTATGCCTGTTGA # Right flank : TAAAGTGCAAGGTTGCACCGTTTGTGCTTGGCTATACGGTCATTTCGTAGACGATATGCCATATCTAAGAAGCGAAGATAAGGCAGAATCCGTACGAAAATGGTATAAGATTCGCCCGAAATACTTGTATTAGAAGAATGTTTAGAAAGGGACGTTAGAAGACGCCCCGAGCGAATCTGATAATTGCTACGTACAACGCTTTCTTGCGTAGTATATATTTTAGAGATACCCTGATGGAGAGTGTCGTGAACAAATTTCTTATGAATAAGACTTTCTGTTACCATATTTACCTTTTAAGTGCAAATATAATAACAGACAGTATTAGTGCAAAGGACAGTTTTTCCTAATGATGGATATTATTTCATTAGATGTTTGTAAAGGGAAATTCCTATTATAGGAGTAAAACAACAGCAAAGCCCCAAGTAGATACATTTTACAAGAAACGGCGTGCCACGAGTAACAAAGGGCATTGCAAGGAGGGTTATAAGGAATGAAATAGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTTTGCTAATGCAAAGATACTAATTTTAAAGCTAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-4.10,-4.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //