Array 1 624-116 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYGV01000004.1 Acinetobacter calcoaceticus strain GK1 GK1_c4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 623 28 100.0 32 ............................ AATTGATCAACCACCACCTGCATCATCGCCTC 563 28 100.0 32 ............................ GTTTTCATCAAGCAGAAGTACTTTAAATCCAT 503 28 100.0 32 ............................ ATCTGCACCGGTTGAACTTTGCCATTGGACTT 443 28 100.0 32 ............................ TAAGTTACCCCTGCGGGAATGCTTTTAATGTT 383 28 100.0 32 ............................ AAACAAATCATCTAAGCCCCCACCATCAAAAC 323 28 100.0 32 ............................ TCCTGAAGTCGGGCTTTTAAGTTTTCTGATTC 263 28 100.0 32 ............................ ATTATATCCAACTAACTTTCTAATAAATGAAA 203 28 100.0 32 ............................ TTTAGAAATCTCACAGAATTCCAATGCTTTAA 143 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 100.0 32 GTTGCTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGGGATGAAGGAAAAAATTCTCACGACACTATTGCTGATATAGCCAACAGCTACCTCGATCATGGAAATTATATTGCCTATGGCTATGCGGCAGTTGCTTTAAATGGAATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTGAAAGATGCTTTTGTTATGCCAATCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAATCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : AACAACGTAAAGCCGGCCACAATGGGTGTATTCCAGTTAAATACCGCTGACTACCTATTCATGAAATATCGCTCTATGACTGTCGAATTAATGAGTGTAGTACAAGACTATTATCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTACTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 56438-52989 **** Predicted by CRISPRDetect 2.4 *** >NZ_JYGV01000003.1 Acinetobacter calcoaceticus strain GK1 GK1_c3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 56437 28 100.0 32 ............................ AGCATCCATAGCGCCACGGTCATATTGAAAGG 56377 28 100.0 32 ............................ TATATGACATGTTGCCCGATCCTGTTAGGTTC 56317 28 100.0 33 ............................ CCAAATAAATAGGATTGTCGGCTTGCGATTAAC 56256 28 100.0 32 ............................ CATAAATCAAACAAGCCAACATAATTGAATTC 56196 28 100.0 32 ............................ ATTAAAGTTGCCCGGAACATAGTCGGAACCAC 56136 28 100.0 32 ............................ AGAAAGTGCAAAAGCTGAACTAGAACAAATCG 56076 28 100.0 32 ............................ TGCTCAATATATTTATTATAAAAGAAGTAATA 56016 28 100.0 32 ............................ ATAAGTACCTAAAGAACTACCGTTAGTAAGAA 55956 28 100.0 32 ............................ TTATCAGCCTGTATGTGATGCACTCTCATTTT 55896 28 100.0 32 ............................ TCCCACAGAATCTGCACCAAATATTAATGATC 55836 28 100.0 32 ............................ TTCAGATCGCATAATGCCGACTATGTAAAATA 55776 28 100.0 32 ............................ TTCAAGTAATGTTTGTTTAATGATTTCATGGA 55716 28 100.0 33 ............................ CAATAAGACCTCGAGATAATCCGATAAATTCTC 55655 28 100.0 32 ............................ AAAAAGCCAATGTTCATATGCGTCACTCTCGA 55595 28 100.0 32 ............................ TAGATCGCGTTCAAGTGTCAAAGTTAATAAAC 55535 28 100.0 32 ............................ AATCCTGAACACCTTTTGTAGCAGCAGCAGAA 55475 28 100.0 32 ............................ TGTAATTTTCATCATGATCATGCTCTTGTTTA 55415 28 100.0 32 ............................ AACCCGAACATCAAATGCAGGTCATTGAAGTC 55355 28 100.0 32 ............................ AATGGTTGAGGGAAATCTTGTGGCTGGCGAAT 55295 27 96.4 32 .............-.............. TGAGTATTCATGTGTTTTAGAGGGTAGCAGTA 55236 28 100.0 33 ............................ GTGAAAATGATAAGGGTGAATTAGATTGGACGC 55175 28 100.0 32 ............................ GTCTTTTTTGAGCCAGATTGAATGACCAAATT 55115 28 100.0 32 ............................ AATCGCTGTATACCAAGAAGCAGTTGCAAAAG 55055 28 100.0 32 ............................ TCCAGCATTACGTCCAATCGACATAACTGCGC 54995 28 100.0 32 ............................ CAAAGCTTTCCATCGATCTGCCAGTCTGGAAC 54935 28 100.0 32 ............................ TACAGGCAAAACCCTTGTCAATCTTGCTGGCA 54875 28 100.0 32 ............................ TAAAGCAAATATTCACCACTTCGAAGCCATTC 54815 28 100.0 31 ............................ TACACCCGTTTGCATGGTGGACGTTTTATAT 54756 28 100.0 32 ............................ TTGAATTGCGTAAACAAGAGGGGGCTGTTTGG 54696 28 100.0 32 ............................ AGAATCGTTGAAAAGATAATTTATGACATTGT 54636 28 100.0 32 ............................ ACAAAGCTAAAAAGGCCGAGAAGAAAAGTAGT 54576 28 100.0 32 ............................ ATTCCGCCTGAGAGTAATACGATATTAAGGTC 54516 28 100.0 32 ............................ ATTTACGTCTGGACGTGCATTTACACTATCAA 54456 28 100.0 32 ............................ ATCACCCACTCAAGACACTGATTAGTTGCTGT 54396 28 100.0 32 ............................ TCTCTCTGATTACAAGCTCCCAGATGATCATT 54336 28 100.0 32 ............................ ACTTGAACAAGTAGATAAGCAGCACCTACTAG 54276 28 100.0 32 ............................ AGATGAATATGCTCAGACGTAAGGCGTCTAAC 54216 28 100.0 32 ............................ AAGCCGTGCTCTCCGATCCAGCTACACACTTC 54156 28 100.0 32 ............................ ATACAAGTTCTTTACGAGCACGACCAAAATAA 54096 28 100.0 32 ............................ AAGGCAGGTCCCCTTTTTTGTGGGTGCATGGC 54036 28 100.0 32 ............................ AACAGTAGAAGATGCGATAGCCAATATCGCTG 53976 28 100.0 32 ............................ ATCGTGTAGGATTCACCATACCAAAGCATGTG 53916 28 100.0 32 ............................ TGAACTGACTCATATCCCAAGTCTTTCCAGTT 53856 28 100.0 32 ............................ AATCAGAGCTTGAATAGCAACAGTAACAGCAG 53796 28 100.0 32 ............................ CAACTTGTACTGCCTTTGGTAGTTGTTCTGAA 53736 28 100.0 32 ............................ ATAACCCAACCAATAGCCTCAATTAACTGAGT 53676 28 100.0 32 ............................ ATAATGGTCATTTTGGTGATTGAATTATTAAT 53616 28 82.1 32 A..CG.......GT.............. ACGCACAAGAAAGCCCATTTCTGGTCGCTCGA 53556 28 89.3 32 ...CG.......A............... CAAGTAGGATTTGCAGCCCCAATAGTCTTTAT 53496 28 85.7 32 ...CG.......AT.............. ACGTCTTCTAATGATGGACTCTAATCCAATAT 53436 28 85.7 32 A..AG.......T............... ACGAATCAATATACGGAACGGAGAACCAGCCA 53376 28 92.9 32 ...T............T........... TGTACGTTTGAGTGATACGTATAAACCTAAAA 53316 28 96.4 32 ...T........................ TTTGTTGACTGCATGATTCGCTTGGGTACCGT 53256 28 89.3 32 ...CG.......T............... GCAACAAAAAACACTTGATGAAGACAGTTCAC 53196 28 92.9 32 ............AT.............. CACACAATAATTTTGACTAAACCGCCTTTGAC 53136 28 92.9 32 ...AG....................... ATCAATCCAGCGGCAATGACTTGCTGAATTGC 53076 28 92.9 32 ............GT.............. CAAACATGTATGCAAAAGACCTGCTTAATTAT 53016 28 92.9 0 ........................AT.. | ========== ====== ====== ====== ============================ ================================= ================== 58 28 98.1 32 GTTGCTCATCGCCCAGATGATTTAGAAA # Left flank : AGAGATTTCGAATGAAAACTATGTTTAGGTGGACTTTGATATTTGTGAATGT # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTCACGAATTTTGGTGGGATGGCGTCTACCAAACTAACCAACTAACTAATTATTATAATTGATAAAATAAAAATTATATTAATAAGGGATACAGACTAGGATACAAATCATTAGTTCTTACTGTCCTATCATCCATCTTCACCCTATCCAAATTTGAACTAGAATGAAACTCTTACTTAATTTCAACGAGATTCAATCACACCTTCTTTTACTAAGCCAACGTCGGTAAACATCACCCCGAGGGTCGGAACAATACTAAGAGTTAAATAATTAATTAATAACAAATTTATAGAAAACAACATCTACTGGGTACCACTAAGGGGACCTATTAAAAATTTTACTATCTTTAAAATACCAATATCTTTTTGATTATTTTCCTATCACTTATTTAAAAAGACACTAAATTAAGCTACTTAAACAAAGACACAACTTGTCGCTTTCCGTTAAATTTTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCTCATCGCCCAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTACTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [30-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //