Array 1 36139-36869 **** Predicted by CRISPRDetect 2.4 *** >NZ_UYXG01000002.1 Bacteroides thetaiotaomicron VPI-5482 isolate Bacteroides thetaiotaomicron 81H8, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 36139 29 100.0 34 ............................. TCGTAAAGGTTATAGATGTTTCTTTCATGATTAT 36202 29 100.0 34 ............................. TTGTTAAACTTAGCATATCCATTCTGACCTAATG 36265 29 100.0 35 ............................. ACTAAATTTAATTACATCTTTGCAGACGTAAGCCT 36329 29 100.0 36 ............................. GTCTCTGGGTGGATGCTACTTCGCTGGACGAAAACA 36394 29 100.0 34 ............................. GCGTTTTCAGTTCCTTCGCATCCTTTACATCGTA 36457 29 96.6 35 ..................A.......... AATGGATGGATGGTTTTGCACGCAGTCCACAATCT 36521 29 100.0 35 ............................. CCAGAAGTATTAGCCAAAATCCTTAACGCAACTCC 36585 29 100.0 35 ............................. TACGGATATGACAAGAAGGATGGTTATGTTATTTG 36649 29 96.6 35 ..........A.................. TAGATAAGGTCGATGAACTCGGTAAGGGCATAAGA 36713 29 100.0 34 ............................. AACACAGAAACTCCGAATCCGTCAAGGGTGATCT 36776 29 100.0 36 ............................. GTCTTTTAGAAAAGAGTGTGATAGTGTTTTCTATAA 36841 29 89.7 0 ...........G.....T......A.... | ========== ====== ====== ====== ============================= ==================================== ================== 12 29 98.6 35 GTATTAATTGGACCTTGCGGAATTGAAAC # Left flank : TTTTAAGATGTATTGGTAGAGTATGTATGTCATTTTAGTATATGATTGCGGAGAGAGAAGAGTAGCTAAAATGTTGAAACTGTGTCGTAAATATTTAAACTGGATACAGAATTCTGTTTTTGAAGGTGAAATATCTGAAGTACGCTTAAAAGAACTCTTATCTTCAGCTAAAAAGTTTATAGATGAATCTGAAGATAGTATCATTGTTTTCAAAGGACCTAATCATAGCTCTTTGGAAAAAGAAATAGTAGGGAAAGAACGGTGTAGTATAGATAATTTTCTGTAACTTAGTTGTCGATGATTCTAATACTAGCTTCCTTCCCAGGGAAGATACTTTTTAAGAGCTCTTTGACTTGTTGATTTACAGCAATATAAGTGTAGTGTCGATCTCCAGTACTTTTTATACTTTTGGGGATCGACACTGTTTTGTTCTTTTAAAAAAACTTTTTTAGAATTGTAACTTACTCATTTATAATGGTGATTGTTGGATTGATGAGAGA # Right flank : CTTGTGATTTCGTTTTTTTGATTGATTGCTATTCTGATACTAATGAAAAAGACTTTAACTGGCTAGAGTGCTTTATTTTCGATATTATTTTATACATGAAGGTGACTTCAATTATATACTGATTCTTGAAATGTAGTTTTATAGAATAATAATGTCAGTCTTTGATTTTATTTATTTTATTGTAGTTTGAATAATAATAAAAAAGATTTTTACCATTCATAAGAAATACTGATCTGAGGCACCCATTCCCATCTTTTTTGTATGGTGTTGTATTGATATTGTACGCCGGTTTTCAATTTCCAGCCTTTACCTACTTTTAAAACAATGTCGCTGCCTAGTGTGGTGGGTATTGCTTCAGAGGAAAGTCCGCGGTATTTTCGGGTGTCCAGATTTTGTTTACCATATATGCTAAGAAACCATTTTTTAGAGAGCTTATAATCCATTTGAGTTTGGATATGAAAGTGGTTTGAACTTTCACTAAAGTTACTTTTACTATGCAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGGACCTTGCGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //