Array 1 53-1013 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTKE01000040.1 Micrococcus luteus strain 2385 contig_40, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 53 36 100.0 35 .................................... TCAGGGTTGCGGTTGCCGCTCGTCTCCCAGTCGCC 124 36 100.0 34 .................................... CCCACATGGGGGCGAGTACACGGTTGATGCCCTG 194 36 100.0 34 .................................... GGAGGGCCTCGTCCGGGTCGTTGGCGACGGCCAG 264 36 100.0 34 .................................... TTCTGGCCGGCCACCTGGGCGGCTCCTACACGCA 334 36 100.0 35 .................................... GCGCGCGGCTGGGGACCCGGGGCGATGCTGGTGAC 405 36 100.0 39 .................................... ACGTGCCGGACACACCACCCCCCGCCTCACCGATGTTCA 480 36 100.0 35 .................................... CAGGCCCGGAGCTCGGTCACCACCGCGTCCGGTGC 551 36 100.0 34 .................................... GCATGTGCTTCTTCTGGTGGTTGCGGATTGACTG 621 36 100.0 35 .................................... CCGGACGGGTTGCCGATGACCACGGCGGTGTGCCC 692 36 100.0 36 .................................... CGCGTTGGACACCATGAGCGGCACCGTGGCCTTCAT 764 36 100.0 35 .................................... ACCCGCGACCTCGCCACCGTCACGTCTCCGGGCTC 835 36 100.0 36 .................................... GGACGGCCTCGACGTGTCCAGCCAGGTCATCGGCAA 907 36 100.0 35 .................................... GGCGAGTCCATCCGGGACCTCGGGGACGCGATCCG 978 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 14 36 100.0 35 GCCTCAACGAAGTCCGCTCCCCACAGGAGCGGAGAC # Left flank : CCCCACAGGAGCGGAGACCGAGGTAGTCCTGCACGGACCACCACTGCGCCGGG # Right flank : TGGACGCGATGCCCCGCGCGAAATCCTTGCCGTGACCGCCTCAACGAAGTCCGCTCCCCACAGGAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGTCCGCTCCCCACAGGAGCGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [25.0-33.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 55887-55354 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTKE01000041.1 Micrococcus luteus strain 2385 contig_41, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 55886 36 94.4 34 ......C................G............ GCAAGCGGCGGGCCGCGATGACCGGCCCCATCCC 55816 36 97.2 35 ...........C........................ GGGGTGCCCGGCTTCCACGTCATCGTGGACGTCAG 55745 36 100.0 35 .................................... ATCAAGGGTCTCGGCGCGACCGCCGCCCCCCTCGT 55674 36 100.0 37 .................................... AGGTCGAGGCCCGCGTCGGTGGGGTGTGCCCGGGTCG 55601 36 100.0 35 .................................... CCGGGCGGGCCGTCCCGGAAACGAAACATCTCGCG 55530 36 100.0 36 .................................... TCACGGAACAGGGCGACGGCGGAGAACCGTTGACCG 55458 36 97.2 34 ............T....................... GAGGAGTCGGTGGTGCTGATCGGCCCGCCGCGCT 55388 35 88.9 0 ............T..................-..CT | ========== ====== ====== ====== ==================================== ===================================== ================== 8 36 97.2 35 GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Left flank : GAGCGGACTTCGTTGAGGCTGGTTGCGGTTGATCCATTCCACGCCTGCCGCCC # Right flank : CTCTAGGTGTGATGTCCAGGGAGGTTGTTGAGCCTGGTGGCAGGCGCGGCGCCGATCGCGGAGTGGACGCGATGATGATTGTAGAAGTGCAGCCATCCAGGCAACGCGGCCCTGCGCTCCGTCTCTGAGCTGTAGAACCGGGCGTAGGCCCACCCGTCAGCGAGCGTGCGATGGAACCGCTCAATCTTCCCGTTCGTCTGCGGCCGGTAGGGCCGAGTCCGCTTGGGCTTGATCCCGAGCTCGGTGCAGGAATCACGCCAGGCATGCGAGTGGTAGGCCGAGCCGTTGTCCGAGAGCACCCGCTCCACCTCCACGCCCAGGCGCGCGAAGTGGGCGACCGCGCGGCGCAACACCGCGATGGCCGTCTGGCTGCGTTCATCGGAGTGCATCTCGACATAGGCGAAGCGGGAGTGATCATCGATCACGGTGTGCAGAAAGCCCACCCCGAGCCGGGGCTGGTATCGGGCATCACGGGTTCCTTCGCGGTCCGAGGTCGCCGC # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCGCTCCTGTGGGGAGCGGACTTCGTTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-31.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 72-392 **** Predicted by CRISPRDetect 2.4 *** >NZ_JTKE01000073.1 Micrococcus luteus strain 2385 contig_73, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 72 36 100.0 35 .................................... GCGCGGGTTGCAGTCTCCTCGGGCGGGGTTGTGTC 143 36 100.0 35 .................................... AACCCGGGGTCGATGCCCAGCACGGAACGGCCCCG 214 36 100.0 37 .................................... TCAGGGTGCCACGGTAGAGGGCGTCGTGGTGGGCCGC 287 36 100.0 34 .................................... GTCCGCCAGATCGCATACATGGTCCCGCCACGGA 357 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 5 36 100.0 36 GCCTCAACGAAGTCCGCTCCCCACAGGAGCGGAGAC # Left flank : GCTTTTCATGGCCGCTTACACAGGAGCGGAGACCAGGCCCGCGCGCACGCCGTGGCCACCGATGAGCTGTTG # Right flank : CAGCACCTCAGATTACAGCCCTTTGACATGGGCAGACGCGACCGTCGGCGAGCCCTGGGCTCAAGAGGCGTCCGTGGAGCGCCATGCTTATCGGCCTCGACCCATGAACCGTGGGCTGACAAGCCCTTTTCTGATGCGACGGCTCGCCGGATTCCGGACATCGACGGAGCCTTCGCGAAGGTCCCTGGCTCGCTTCAGATGATGATGGGCCCATCCACAGAGATCTCGCGTGATCGACCCAGAAAGCTGAACTGCTCTGCGCCAAGCGTGGCCGTCAGGCCGAGGTCGCAGACCAGCACGCTGTCCTCGCCCGGATCCAGCACCGCTTCGAGGGCTGCTTGCAGGGAGACGAACTGGGCGGGCAAGGCATCCACCACGAAGACTGAATATTGGACTCGATCTCCGAACCCTTCGAGGACGCGGGCCGCCCGGGATCTGCGGCGGTCGTCAGGAATGTCATAGGCGATGAGCCTCCTCCGGAGACGATCCCGGGCACTCAA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGTCCGCTCCCCACAGGAGCGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [30.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA //