Array 1 85019-88278 **** Predicted by CRISPRDetect 2.4 *** >NZ_POXF01000003.1 Neisseria weaveri strain C2009035459 C2009035459_S27_ctg_1583, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================= ================== 85019 32 100.0 34 ................................ CCGCGGATACTTTCCCGATTTCATAGACAGACTG 85085 32 100.0 35 ................................ ATTCAAGATATACAATTACTGTAGAAAATCCCCGA 85152 32 100.0 37 ................................ GTTGTAGAGCAGCTCGAAATTCAAAGGCTTAGACTCG 85221 32 100.0 36 ................................ CCGCGCTTCGGCCAAAGAAAAATCAGGATACTGTCC 85289 32 100.0 34 ................................ AAGCTCTTCCAGCAGTTCCGGTTCACAAACAGGA 85355 32 100.0 36 ................................ AGTTTTTATATTGGAATGAATACATTAAGTAAATTA 85423 32 100.0 35 ................................ CCGTATATCAGCAATGATTAACAGGGATGACGATT 85490 32 100.0 35 ................................ TTTCCAGGCGAAGCGAGCGACAGCCGCGTATTGAC 85557 32 100.0 35 ................................ ATTTATGGGGCCGTATTGCGCACGCAGCAAAAACC 85624 32 100.0 33 ................................ TTTGTTGGTGCAGTCCATACGCTATCAACGGAC 85689 32 100.0 35 ................................ CTGTGCAGGTTGGGGTTTCGGTAAACGAAAATGCA 85756 32 100.0 33 ................................ CCTACCTGATGTGTTCGCCCGTGTTGCTGGCCG 85821 32 100.0 34 ................................ CGTTTGCCTTGCTTGCCATCATTTTGGGCTGTTT 85887 32 100.0 34 ................................ ACCCTGCTGCTGTCCTTGCTGATTTTGGCTTTGT 85953 32 100.0 36 ................................ CAAATATAGTTTTCATAATCATTCGGCCTTAATTGA 86021 32 100.0 36 ................................ ACGGCAGAACGGCTCTTCCAAATCCCAGTCCTGCAC 86089 32 100.0 35 ................................ CTTTTAAAAGTGTTTGGCGATAATGATGATATTTT 86156 32 100.0 36 ................................ TAGGAACCTATTTGATTTAGCCCGATATTAAGGTCA 86224 32 100.0 36 ................................ AATGCGCCCGCCTTTTCGTGCTCTGGCAAGGAGTTT 86292 32 100.0 35 ................................ CGTATTAGTGGCAACGCCTTTGCCATCCCAAACAG 86359 32 100.0 39 ................................ CAAGTCAGAAGCGTTGCTATTGAAGAAGCGTTTGTAGAG 86430 32 100.0 36 ................................ ACGCTAACGGCCAAAATACACTCTGCCCGTGGGCAG 86498 32 100.0 36 ................................ CCCAGTCGTCTGCGTTGTATGTGCCGGATGTGATAT 86566 32 100.0 35 ................................ AGGATTACGATATTCCCGAAGGCCACTTTCGCGTG 86633 32 100.0 35 ................................ TGCCTGCATCCGGCCTTCCGCTTCCGGCTTGGCTG 86700 32 100.0 38 ................................ AAATCTTCAACAGAGAAATTCTCATTTCCGCTCATACC 86770 32 100.0 36 ................................ CCACCATGCACCCAACACCTTACATTGCTGTTGCGA 86838 32 100.0 34 ................................ ATGTAGGGTAAAAGTGATCTGGTCAATAAATGCG 86904 32 100.0 35 ................................ TTCTTGGAATGATTTTGGTGGCGGCACCTCCATAC 86971 32 100.0 35 ................................ TTCTTGGAATGATTTTGGTGGCGGCACCTCCATAC 87038 32 100.0 36 ................................ TTCATCTCATCAACCACGCGCTGATACTGAACCTGA 87106 32 100.0 38 ................................ ATTTCCACCTCCTGCCATTCGGCATATTTATTCATTTA 87176 32 100.0 38 ................................ AAAGCTGAAAAGGTCACCCTCGGATTTTTCATAAATCG 87246 32 100.0 36 ................................ CAAGACAATCTCTTTGAGATTGTTTATATAATCTGA 87314 32 100.0 35 ................................ AAAGCAACGGTATTTGTCCAGCAAGCAAAACCTTT 87381 32 100.0 35 ................................ TTCCATACGCTTGATTTCCAGCCGGTGACGTTCGG 87448 32 100.0 35 ................................ AAAAATCGTTTTTGCCACAGGCACGCCAATCAGTA 87515 32 100.0 35 ................................ AACGACACGCCGACCGACATATCGTCTGCCGCCAA 87582 32 100.0 34 ................................ AAAAACAGGAACGTTGGAATTTCTCAAGGAAAGT 87648 32 100.0 35 ................................ GGTTTATCCGCAGCCAACGCAGACCCGCTGTTGGT 87715 32 100.0 34 ................................ CCTAGAATGAATAGAATTTTTGAAGATTTTTTAC 87781 32 100.0 35 ................................ AGGGCGAAAACCTGCTGCAAGCCGAAGCGGCCACC 87848 32 100.0 34 ................................ GGCTTGTCGTATTTGATCCGCCACATTTGGTTCA 87914 32 100.0 36 ................................ CGCTATTTCGATGCCGAATTAAACGGCGGCGTGAAA 87982 32 100.0 36 ................................ TTAATATTGCCACAGGCACAATCGACAGCAACCCGA 88050 32 100.0 34 ................................ TGCATACGGGTAACAACACCGGATACTGCGTCTT 88116 32 100.0 34 ................................ CCGTTGCCGGTTCGGCCGAGGGGGCGGAAGTGGA 88182 32 100.0 33 ................................ GGCAAAACCGCGATACAGCTTATCGACCTTGCC 88247 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ======================================= ================== 49 32 100.0 35 ACAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Left flank : AATAAGGGGAAATAGCGTGTTGATGTTGATTACTTATGATATTTCGCTGGAAGACGCAGATGGGCAGGCGAGGCTGCGGCGCATCGCCAAACATTGCCTCGATTACGGCGTGCGCGTGCAATATTCGGTATTCGAGTGCGACGTTACGCCGGATCAGTGGGTAAAACTGAAGGCCAAGCTGCTCGACACCTACCAGCCCGAAACCGACAGCCTGCGCTTTTACCATCTGGGCAGCAAATGGCGGCGCAAGGTGGAACACCACGGCGCGAAGGCGGCGGTGGACGTGTTTCAGGATACGCTGATCGTGTGAATCGCTAACCCGTGGTTCTCATGAAAATGCGGGGTGGTTAGCGATGCAGGATTGTTCTTTAACAATCAGGACATTAGGAAAGCGGGTGTGGCGGAATAAGGCTGTGTTATACTCGCTTTTCGCGTTTTCGGAGAGCTTTAGCGAATCAGGGCCGTGCAAGCCTTGATGGATAAAGGTTTCCGAGAAGGCT # Right flank : CACGTCATCGGCTGTAACATCGCGCGCGTTTTGTCACCATTTAGCGATTTTTTTGTCACCACCCGACAAACAAACTGGTGACAAAAAATCCGCTAAAACAAACCCCGTTTAAAGATAGGTTAAACGGGGTTTTTAAACGCCTAAAGTTTGTACACCAGATTATCCTCGTATGAGGCATATTTGCTGACCTTAGCCTGCACGGTTAGCCGGGTAGAGTGATCAAATACATGCTAATTATCCAGCTGCATAGACACGACCGCATCAATATAGTCGATAAACTCCGACCGCGTAGAGCTGAAAAACAGATATGGCGGGCGTACAAGATTGACAAGTTTGAGGTAATCAACCAAGCCGAAGCGGCCGTCTTGAGCATAAGCCGCTTGTGTAGTGGATAAATAGGGCGGATCAAGCACCAACAATGCTTGCGGGTCGTCGGAAAACTGCGGAATCAACGTCTCGTAAGACTGGCGGGTTGTCTCCAAGCCGTCCAAGTAGTCATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ACAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched ACAGCCGCCTTCGGGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.80,-5.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //