Array 1 8769-9396 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FNUH01000009.1 Streptococcus gallolyticus strain VTM1R27, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
      8769	    36	 100.0	    30	....................................	GGATTATGATTAATGTGTCCTAGCTCGTGT	
      8835	    36	 100.0	    30	....................................	ATCAAACATATAGTTTTTTCTCCTTTTTTG	
      8901	    36	 100.0	    30	....................................	TTTTCAAGACCATTAACCTGAGCCATGTGC	
      8967	    36	 100.0	    30	....................................	CGGTCAATAGTATCTTCCCAATCTAATTCA	
      9033	    36	 100.0	    29	....................................	TCAACGACATGTCTTATTAACGACTTATT 	
      9098	    36	 100.0	    30	....................................	CAACAGCAGCAATTACTGGTAACCATTTCA	
      9164	    36	 100.0	    30	....................................	TACAACTAATGGCTAATTTGAGCGTAAACA	
      9230	    36	 100.0	    30	....................................	GTTAGTAGTGAGGTAAGAATATGAACGAAT	
      9296	    36	 100.0	    30	....................................	TGGGTATTAGGCTAGGAATTAGAAATAAAA	
      9362	    35	  94.4	     0	..............C......-..............	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	  99.4	    30	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   ATGGAAAAAACTTTCTTTATGATTAAACCAGATGGTGTGAGACGCGGGCTTGTTGGTGAGGTGCTTCACCGTATTGAACGACGTGGTTTTACAATTGAAAAATTGGAAATGCGTATGGCAACTCCAGAATTATTAGAAAAACATTATGCTGATTTGGTTGACCGCCCATTTTTCCCACTAATCGTTGATTTTATGACAAGTGGTCCAGTAATTACTGGTGTTATGTCTGGAAATGAAGTCATCACTTCATGGCGTACGATGATGGGAGCGACAAATCCTAAAGAAGCTCTTCCAGGAACAATCCGCGGAGATTATGCTCAAGCACCAGACGAAGGTGGCGCAACATTTAATATTGTTCATGGGTCAGATTCACCAGAATCAGTTGAACGCGAAATCGCCCTCTGGTTTGGGGAATAAATAAAAGGAGCTATTTCGAAGCTGAAGTCTAGCTGAGACAAATGGCGCGATTACGAAATTTCGTGAGAAAAATGGTCCACGAG
# Right flank :  CCATAATTGATTTTTAAGCTCTGTCTCCATATGTTTTAGAGCTGTGCTGTTTATTTTAGCATCTTATGATGCTTTTTTCTTTTCTTGAAATGACTTCTAAAACTTTTTATAGCAACGTTTCTGTTTATCTGTTATAATAGAAACAATGATTAATTGTATAGGATTGTAAGATGGATATTCAAGAATTAAAAAAACGACAAGAGAAGATTCGTAATTTCTCTATCATTGCACATATTGACCACGGGAAGTCAACTTTGGCTGACCGTATTTTGGAAAAAACAGAGACGGTTTCTAGTCGTGAAATGCAAGCTCAACTCTTGGATAGCATGGATTTGGAGCGTGAGCGTGGTATCACGATTAAGCTTAATGCGATTGAGTTGAACTACACGGCTAAAGACGGTGAAACCTACATTTTCCACTTGATTGACACCCCAGGGCACGTTGACTTTTCATATGAAGTGTCACGTTCTTTGGCGGCTTGTGAGGGGGCAATTTTGGTT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:61.11%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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