Array 1 6460-11917 **** Predicted by CRISPRDetect 2.4 *** >NZ_PJAT01000081.1 Psychrobacter sp. 4Dc contig74, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 6460 32 100.0 34 ................................ TGTGGTCTAAATTCAACGGTAAAGCGGTTCTTAG 6526 32 100.0 33 ................................ TTTTATTTGATCTAGGTCGTTTGCGTACAACTG 6591 32 100.0 32 ................................ CAGTCACCACGTATCAGGCGCACATTACCTGC 6655 32 100.0 32 ................................ ACTAATAGCACAAACAGCCGTTTTTTTATCAA 6719 32 100.0 35 ................................ ACTATTAATACGGTTTTTGCGCCCATGATAATTAG 6786 32 100.0 33 ................................ ATCGAAGCTGTAGAGATGGCGCAAGACGCACTG 6851 32 100.0 32 ................................ ATGTCATCAAACATCAATGACCATGTGGACGC 6915 32 100.0 34 ................................ TGCAATAGCGCGTTCTCAGCCTGTTGGTACTGTG 6981 32 100.0 34 ................................ AGACAGAATTGAACGACCCGACACAGGTAAATCC 7047 32 100.0 33 ................................ TTTTGTGCAATGGTTAAAGAGGACATGGCATGA 7112 32 100.0 33 ................................ TTGAGGCTAAAGAACAAGATATGCACCAACACT 7177 32 100.0 32 ................................ GTCCAGTAATGCACAGTTAGGGCATCAATCAA 7241 32 100.0 33 ................................ TGGACGCTGTTTTTTAATATAAGGCATTGGTTT 7306 32 100.0 32 ................................ CCAATCCATACTATCGGCAGTCTCTTTGGCAA 7370 32 100.0 33 ................................ CATCCAGAGCGCAGTATTTTAATCAGCTCTATT 7435 32 100.0 36 ................................ ATCGACACATACGCCACTATTAGCAGCGCATGTAGC 7503 32 100.0 35 ................................ GCTAGGTATATCGCAAACCCTGCCGCATCCCATGA 7570 32 100.0 33 ................................ CAACCTCACTTTTTAATACCAGGTCATACGACT 7635 32 100.0 34 ................................ ATAGGGTCTGCAAACGATGCTGCTGACCAGTTGC 7701 32 100.0 34 ................................ ATTCACGGCGGTATCTAAAACAGGATGCAATAGA 7767 32 100.0 34 ................................ AGGATCAGCTTTACCGCTATTGATAGTCTTAGTA 7833 32 100.0 34 ................................ CCAATCCTCATAAGTGTCACCTTCGCCATCGTCA 7899 32 100.0 35 ................................ GATAAATTGTCAGGACGTGATACCTTGCCAATAGC 7966 32 100.0 33 ................................ AATAACAATGGTAAGCCGTTGATTGTACCAACC 8031 32 100.0 34 ................................ AGATAATACACCCTATTAGGTGTGGCAATCGGGG 8097 32 100.0 34 ................................ CATCTAATCCTGACTACCCTATTATAGATAGTCG 8163 32 100.0 32 ................................ AAACTCAGACTTTTTATACGGATAAGGGGAAC 8227 32 100.0 32 ................................ TACTTTTAAAGTAAAGCTACCCCAGTGGGAAA 8291 32 100.0 35 ................................ ACGATAGCTGTACCGACGACAGCAGACGTTGAGGT 8358 32 100.0 33 ................................ ACTCAAAAGAGAGTCAGTTTGAGTCAGTGGTTA 8423 32 100.0 32 ................................ CTATCTAGCACTTGGGATGGTGTGGCGCGTCA 8487 32 100.0 32 ................................ TCGTCTGTAGTTTTGGACGCACTCAATACCAC 8551 32 100.0 34 ................................ ACCCCTGCTGACACGCTATTTAGCCCTGCTGTGA 8617 32 100.0 34 ................................ AGTATATATATATCCCAGCTATGAAACTAACACC 8683 32 100.0 35 ................................ CAATTTGCAGGTAGTGTGGCAAGTCCGACGAATGA 8750 32 100.0 33 ................................ CATTGGCGAGATGACCCACGCAAAGATGATAAG 8815 32 100.0 32 ................................ CCTTTAAAGCGTGACAGTGCGATTGAGCTGCT 8879 32 100.0 34 ................................ TTGCAACATATGAATGGCCAAGATAGATGGATTC 8945 32 100.0 33 ................................ TAAATAGAGGGTATTAATATGCAACATGAAACA 9010 32 100.0 36 ................................ ACCATGTTAGATTTAAACTCAGCATAAGCGGCTGTT 9078 32 100.0 34 ................................ TATAGCAATTTAGCGAAAAATCCTTATTGCAGCT 9144 32 100.0 34 ................................ ATACTAACCCCTGAGCCTGCCAGCTCAGGGGTTA 9210 32 100.0 32 ................................ CGCAAGCAAGAAGGCATGGACGGCATACAGTC 9274 32 100.0 34 ................................ CTGCTCGTCGGTAAATTGCTCGTCGTCACCCTCG 9340 32 100.0 33 ................................ ATCAATCATCAAAGCAAGCTCTGGCACCGGTTG 9405 32 100.0 33 ................................ ATCTAATGCTGAGCTAGTCTATCGCCTTGAAAA 9470 32 100.0 34 ................................ ATCATTGGTTGCTGGATAATCGACAAACAAGCCA 9536 32 100.0 33 ................................ ATCTAATGCTGAGCTAGTCTATCGCCTTGAAAA 9601 32 100.0 35 ................................ AAGTTTGTGTAATCTCGGTCAAACTCTCCTTTAAG 9668 32 100.0 33 ................................ GCTATCGCTCAGTCAAACAAAATACAAGGCCGC 9733 32 100.0 32 ................................ TGTTGGGTCGTCATACGTCGTCACTACTTTAT 9797 32 100.0 33 ................................ CTAAAGGTTGTAACAATAACGCGCTACGCGATG 9862 32 100.0 34 ................................ GGTTATCTGTAGAAACTGTCCTTGCCAAATCCAA 9928 32 100.0 33 ................................ ATATCATGAGCGCGCCAAGACTTGATGATTGAT 9993 32 100.0 33 ................................ ACTGCCGTCAATCGCAAACAACCCACTCAATGC 10058 32 100.0 33 ................................ ATAGTGTGCAACATTACTTCCACACGTTGTGTA 10123 32 100.0 34 ................................ CCTAGTGATAAGCGCATTGTTGTTATGAATGCTA 10189 32 100.0 33 ................................ AAATCCATTTCACCGTTCGGCTGCTCTTTGAGC 10254 32 100.0 33 ................................ TGAATCTGCCTTGCACATAAAAACCGCAATTTA 10319 32 100.0 32 ................................ TGTTACGTCAGTTTGAACGCTTGCCGCTAATA 10383 32 100.0 34 ................................ GATTGTGATAGCGTTGTCACTGTTTAGATCAAAG 10449 32 100.0 34 ................................ CTCAAGCTCTATTATTGCATCATCAACCGTCCAA 10515 32 100.0 35 ................................ CTGTCTGCTGTGCTGTCTTTGCACTGTAACCCGCT 10582 32 100.0 34 ................................ ATTATTGGCGAGATAAGCTCGGCTATAAAGCGTG 10648 32 100.0 32 ................................ CAAGTCCAGTAAAGCGCGTATCCCATACAAAG 10712 32 100.0 35 ................................ TTACTTGGACCTGATGTCTTTTCTGCCGCTGCCAA 10779 32 100.0 32 ................................ ACCAACGCCTCACGAGTCGAGCGCATTTCATC 10843 32 100.0 32 ................................ TTGATATATGGCACCAAGGAAGTTTGGGATGA 10907 32 100.0 33 ................................ CAATAAATAGCACTGAGAATAAAATGACTAAAG 10972 32 100.0 33 ................................ ACTAACGTATGATTCGGACAGCACAATAAGACT 11037 32 100.0 32 ................................ TGATGTATCATTTATCCAAGTGCCCCATGTTC 11101 32 100.0 33 ................................ AAAAAAGCAAAGCCTGAGCCGACTATTGAGGAT 11166 32 100.0 35 ................................ TAACTGCGATGGTGGCACACAAGAGCTACTTGATA 11233 32 100.0 34 ................................ TTAGAACTGATGAAAGGTATAACGCAGTTAATAC 11299 32 100.0 32 ................................ AGCTAAAGCCTGGCGACTGACTGCATTGCTTA 11363 32 100.0 33 ................................ ACCTCCCTAAAATCCGTGTGGCTGATCTCATGC 11428 32 100.0 33 ................................ TTCTAGCGATAGTCCTAACTGCTTGGCGATTGG 11493 32 100.0 32 ................................ AGCTAAAGCCTGGCGACTGACTGCATTGCTTA 11557 32 100.0 33 ................................ CATTATGCAATAGCCCTCTAATCATAATTGATT 11622 32 100.0 33 ................................ ATCATCCAAGCGACCCGTAACCGGCTTTGCTAT 11687 32 100.0 35 ................................ ATGTTGGACGCATTAGACTCAATGCCATAACACTC 11754 32 100.0 35 ................................ ATGTTGGACGCATTAGACTCAATGCCATAACACTC 11821 32 100.0 33 ................................ GAAACCAGTATCCCTTATAAAAAAATGGACAGC 11886 32 68.8 0 .....AC.T.......TT..A..C.....GCT | ========== ====== ====== ====== ================================ ==================================== ================== 84 32 99.6 33 TTCGCGTCCATCACGGGCGCGTGGATTGAAAC # Left flank : CACATCAAGTGCCAAACGTCTACGCCATATTGCCAAGCATTGTTTGAACTATGGGCAACGGGTACAATATTCAGTATTTGAAATCGAGGTCAATCCAGCTGAGTGGACGCGGCTTCGAGCCAAGCTTGAAGATATTATCGATCATAGCGTTGATAGTTTGCGCTATTATTATCTTGGTAAAAACTGGCAAAATAAAGTGGAACATATTGGGGCAAAACCTGTGCTAGACTTAAACGATGTATTGCTGTTTTAGTCGGCATAATAAGCGGCAAATTTAGTATTTGACTGTAAAAAGGTCAGTGCGAACCTATAGCATACATAAAATCTCTAGGAGACTCGCAATAGTCTCGCCATACTATTTAACAGATTGATTTTAATGACTTTATTTTATCACGATAAAACTTTGGTAAGCGAGATGCTTGCCAAATTCGCCTACAGTTTAGACGTTCGCAAATTCCGAGGTTTTTTCTTAACCTTATTAGCGACTTAGACTAGGGGCT # Right flank : TATCTACAAAACACCTATTACTCTTAAAACTTAGGCGTACTATCCATTGCTTTTAAGCGTTGTAGAACGGTATGAGCAAAAGGATTATAATACTTCCAAGCTTTAAAATTTGGCGTATATCTACCTCCGCCCTCTTTACTCCAACGTTTAAGTAAAGCAGCTATGTCTGGATTAAAGTTAACTGCTTTTACTGAAATACCGCCATCATTAAACACCCAAGTATCTACCCATACCTTATTAATAGTAAAACGGTACTTAACATAGTTTTTTTCTGGCATAGATTGCTGCTCGTTCTGATAGCTATTAATTTGTTCACTATTAATGCACGATATATCAGGTGTGCTTAGCCAATCTAGAGATGATGTTTTGGGTTCTATAGCTTCAGGGTATAACCATTTCTTATTATGCACTTGCTCTAGGATGAACTGCCTTGCTTCTTCACTAGGAATATCTATGCTTTGACTTAACAGCTCTCGTAAATCAATTTCTACTGTTTTAAA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCGCGTCCATCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGTCCTCACGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.80,-6.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.74 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //