Array 1 36148-34743 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABOT01000003.1 Bifidobacterium animalis subsp. lactis HN019 contig28, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 36147 36 100.0 37 .................................... GACGATATGGCGCTCAGCGTGGCGGAGTGGGAGGCGG 36074 36 100.0 35 .................................... AAGACCGGCACCGAACGCGACTTCACCATGACCTC 36003 36 100.0 39 .................................... GCCCACCACAACGGCAACGGCGGAGGAACACGCGCCGAA 35928 36 100.0 34 .................................... AAGCCGAACTCAATCACACGCATCAAAGCGAACA 35858 36 100.0 38 .................................... GTATTCGCCGTTCGAGAGGAATGAGAGGATGCTGTCAG 35784 36 100.0 34 .................................... TCGCCATTGGAGACGCGACGCAGGATACTATCCG 35714 36 100.0 34 .................................... ACGACAAGCCGCCGCCACCGATATTCACCTGCGA 35644 36 100.0 38 .................................... GGCCGCTTCGGTGACGGGCTGGTTTTTCCACCACACGC 35570 36 100.0 34 .................................... AATCCCAGCCGCAAGGTCTGATGCCGCCTGAAAT 35500 36 100.0 35 .................................... AAACAGGTCAATCAGCGGCGCAGGGAGGAGACGAA 35429 36 100.0 36 .................................... GAGTGAACAACTCACTGTGCGAACCATCGAACCGTT 35357 36 100.0 36 .................................... CGGTTGAGCAGCCACGTGGTGATACTGCTCGCGCCA 35285 36 100.0 38 .................................... CTTGCATCCAACGCGCACAGCATTGCATACGGGTATAG 35211 36 100.0 39 .................................... ATCATCCTCACGGAAATAGTGAGCATCCTCGAGAACCTG 35136 36 100.0 36 .................................... GGCCGCGATAGTCCACGAGGCGAACGAAGGCGTTGC 35064 36 100.0 36 .................................... GCTCAAGACACTCACCGACCAGCTCAAGAAGACCGA 34992 36 100.0 36 .................................... CGCGATCGTCACCGACTGCACTGTGTTCGCACTGTC 34920 36 100.0 35 .................................... GCGACACCGAACGCCGCCGCCACAGTCGGGATGGC 34849 36 97.2 35 ...................................A AGGGCCAGCAACGTCGTGGAGATCCATCAGGAGGC 34778 36 91.7 0 ...........T.T.....................A | ========== ====== ====== ====== ==================================== ======================================= ================== 20 36 99.4 36 ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG # Left flank : ACGCACTTCAACGATGTGCGCCTGAAGAACTTCATCGAGATGCGGCACTGGGACTCACTGCCAATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGAACCAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCCGTGCTGCAGGCGCGCGGGGGAGACGCGAAGCCCTACGACCAGCCGATGGACTACTGGGCCGAGGTGCTGGGTGTGGGCGATGCGCTCGCAGACGTGCCGGGCGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGGAGCTATCCCGTGCGAGGGCTGCATCATGCAGCATAAAGCGGGGAATCTCTCGCATCAATACTTTGTAAGGATTTGTTGAGTTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT # Right flank : ATGTACTCCGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCGATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATAAAGCTACACCCGTGCGTAGGAGTATGGATGTGACACATGCCATGCGTATACAGCTCGCCTTGCAGGCTGCATGCATGGAGGATATGGGTTATCGAGTAGATGGGACTGAAATATTCTTTACCTCGCACCATCGGATTGTTCCTGTTGAACTAAGAAAATCCGATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //