Array 1 295896-295140 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017294.1 Pseudomonas aeruginosa strain PA83 plasmid unnamed1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================================================================== ================== 295895 29 100.0 32 ............................. AATGAAATCACCCCTTCCCAGCTTCGAAACCT 295834 29 100.0 32 ............................. TGGATGGATTAACGCATGGCTGGAAAGGTGCC 295773 29 100.0 32 ............................. TGCGGAAGCGGCTGCGATCCCTTCCGGCGTGA G [295756] 295711 29 72.4 32 .A.......ATCG.A..........G..A ATCGCAGCGGGAAAATTCCCTGCGGCCTTACC 295650 29 82.8 32 A.A........GC.A.............. ATTCAAGATGGCTGTAATGTTGGTCGCTTGCA 295589 29 69.0 90 CGA.A......G.GA..........C..T CAGTGTAACCGAACCCTATACCGCAACTTCCTGAGCTTCCTCATTCTTGGGGGTGAGCTAATGAGGGTCGTCGGATCAACAAAATCTGGA 295470 29 72.4 30 AG...T.....G.GA..........GT.. CGGAAAGATACTTTCAGAACAATGTCCGAA T [295449] 295410 29 72.4 32 .G.C......TG.T..........GT..T ATGTAACCCTGTTACTTTTCGCTGTTCGGCTA 295349 29 69.0 33 ..C....T..AT.TTT.........G..T ATCGCTGAACTTAAAGCACTAGCTGCCGACGAT 295287 28 72.4 90 ..T.C.....A..G..-.......TT..A ACCCTGCTGGCTAGCCGGCTGCAAGTACTTTTAGATTCCCCATTCTGGGGGTGAACGGTTGCGGCATACCTGCTTTACTCCGCAGACTGT 295169 29 82.8 0 C.T........T.G...........C... | G [295157] ========== ====== ====== ====== ============================= ========================================================================================== ================== 11 29 81.2 44 GTGTTCCCCGCATACGCGGGGGTGAACGG # Left flank : ACAGCTCCCTAACCAGATGTGGATGCAGACTGGCCGGCTGAGCATCGTCGAAGCGGCGCGGCATCGGCAATCTGGTTACCTGCAGCTGCGAGCAGGCAAGCCAAATCCTGCTGGCGGTCCGTTCAAGACTTCCATCTATCACCGGCCCATTGTCCAGGCCGAGCTGACAGCTTTTTGTGTTGGGGATCAGCAAGGCATTGAGGCGCTGCTCAGCGAGTGCCGCCAGATCGGCGGTAAACGAGGTGTGGGGTTCGGCCAGGTGGCGGGGTTCAAAGTGGAGCCAGTAGCCGAAACGGACTGCCCCTGGTCTTGGCGAGCATTGCCGGCAGATGCTGACCCCCGATTGGTTACGTCAGAACACGCCCGCTGTATTGCCGCAATTCGGGGGCCGTACTGGGATCGTACCCTGCACGTTGAGGCGCTGGCGCCTACCCCTTAAGGGCTTGATGAAAAAGCCCAAGATATGGTGTCTTGGAGTAAGCATGCTTCCATATCCTGGG # Right flank : AATGCCATCCTGGCTGCGTTACGTCGTATGTTGTTTTCCCGTTTACCGGGGTAAAAAAAGGCCCGCATCGAGCGGGCCTTTTCCTTTCGGGCGCAAGCTGATCAGTGCAGCTCGTAGTCCCGCTCCAGCGAATTGTCGGCCAGCGGTACCGGGCGCAGGGTCTGCAGCATCACGTGGGCATCTTTGATCGTCCGCAGGATGCCCTGCAGCTGCTCGAGGGTGGCGGAGCACTGCATCTCGACATCGACATCAGGAAGGCCGTCAGCATCGCTATGAACCGTGCTGGCCACCTCATAGCCCTGGCTGCGCACCAGGCTCAGGAACAGGGTGGTATCCAGCTCGGTTTCGGCGCGGAACGAGTAGGTGGAATGGCGGGCGACGGAGGGATCCTGCGTCAGTGCCTCGATGGGCAACATGGGAATAGCGCTGGTGAACTGGATGACTGCGGCCGGGCCTTGGCCCTGGGGCTCCGCCTTTTCGACAGTCAGCTTCCCGGATTT # Questionable array : NO Score: 3.84 # Score Detail : 1:0, 2:3, 3:0, 4:0.06, 5:0, 6:0.25, 7:-0.92, 8:1, 9:0.45, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGGTGAACGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.40,-3.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [19-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1564552-1565479 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017293.1 Pseudomonas aeruginosa strain PA83 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1564552 28 100.0 32 ............................ GCGAAGAAAAAGCCCGCCAGATAGGCCAGGAA 1564612 28 100.0 32 ............................ TGGACGCGGGCGTCCTGGCTGATCAGGCTCCA 1564672 28 100.0 32 ............................ CAGCGGGATCAGCGACCAGCCGATGGCCCGCA 1564732 28 100.0 32 ............................ GTCGAGGCTGTCCAGCCGCAGCACGCTGCCGC 1564792 28 100.0 32 ............................ ATGCCGCCGACCTGGTGCTGGTCGACACGGTG 1564852 28 100.0 32 ............................ TTGACGACCAGCCAGAACCTGCGGCCGTTGGC 1564912 28 100.0 32 ............................ GAGGAGTCCGAAGACTTGTCCGTGTCGTACCA 1564972 28 100.0 32 ............................ AGGAACGTCCCGTCTCAGTTTGGAACGCCCAC 1565032 28 100.0 32 ............................ TCGCGGCCCTCGGTCTGCCAGCGGAAGCCATG 1565092 28 100.0 32 ............................ TTCATCAGGATGCCGCCAAGGGTCCGCATAAT 1565152 28 100.0 32 ............................ ATGAAGGCCAGCAGGCCGAACACGATTGCGAT 1565212 28 100.0 32 ............................ TCGAGCAGCGGCCCGAGGAGTCCGAAGACTTG 1565272 28 100.0 32 ............................ TGGAGAAAAGCAATGCGAGTGGTGCGAGGCCA 1565332 28 96.4 32 ....................T....... AGACAATCCGGACCTGCCGCCCAGGACGATCT 1565392 28 100.0 32 ............................ TGCAGCGACTGCACCTTGGCTTGCTGCCGGTC 1565452 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGGCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGTCCCCCCTCACTGCCGTGTAGCTAAGAAGTCGCGAGCGATATAGTCCCGTAGGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 3079377-3080781 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017293.1 Pseudomonas aeruginosa strain PA83 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3079377 28 100.0 32 ............................ AGTGGGCCGAAATCGGCCGATGAGTTCATCGG 3079437 28 100.0 32 ............................ GCCCAGGACGATCTACTACTACGGCATCCCGG 3079497 28 100.0 32 ............................ TGTCGCAGATCGATCGCGAGGACGCCGATGGC 3079557 28 100.0 32 ............................ AGCAGCAGATCATCGACAACGCCCGCGCTTCT 3079617 28 100.0 32 ............................ GAGAACGATTCCGTCTTGTTGGAGCTTTCTGT 3079677 28 100.0 32 ............................ CGACGAGCAACTGCGCTTGCGCGTGCGTAACC 3079737 28 100.0 32 ............................ GGAAGGCTGGCGCTCGAACGGATGTGTACAGG 3079797 28 100.0 32 ............................ TCCGGATCACCAGGGCGACAGATGGCCACCTC 3079857 28 100.0 33 ............................ CTCTGGCGGTAACCTTCCATGATCTGCGCAGCC 3079918 28 100.0 32 ............................ TGCATGCACATCGGCGAACTGCTGACGTGCTT 3079978 28 100.0 32 ............................ TGGCGCCGCCCGATTTCACGTAGCTGCTCGAT 3080038 28 100.0 32 ............................ TGATATCCAGCTGCTCCAGGAACCACTGGCGG 3080098 28 100.0 32 ............................ TGATTTCGAAGGCCGCGGGCGACTGATCCGGA 3080158 28 100.0 32 ............................ TGGATCAAAGAACGCATTCTCGGCACGTCGAA 3080218 28 100.0 32 ............................ TCCTTGCCGGGCGCGGCGGCGAGCAGTTCGCG 3080278 28 100.0 28 ............................ GAGTGTGAGGCCGGGCAAACGGATTTGT 3080334 28 100.0 32 ............................ TTGACGGCCAATGCCGGCTTCGACTTAGCTCG 3080394 28 100.0 32 ............................ AGCCACTCGCGGGCCAGCTCGGGCGATAGCAC 3080454 28 100.0 32 ............................ GTGTCGCCCAGCACCGTTCAGCGCTACTTCAT 3080514 28 100.0 32 ............................ TCGATCCACACCCGCGAGGACGTGGCCACCGT 3080574 28 100.0 32 ............................ AGCAATGGAAAGCAGCGATGTGACCCGACCCG 3080634 28 100.0 32 ............................ TGCAGGTCATAGGCGTATTCGAAGGACAGGCT 3080694 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTAGGGCGA 3080754 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 98.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTGGGGTGGATTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGTTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGGGCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGCTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 3090956-3089307 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017293.1 Pseudomonas aeruginosa strain PA83 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3090955 28 100.0 32 ............................ TGGCTGATCAGGCTCCAGAACGGATCGTAGAC 3090895 28 100.0 32 ............................ TTGATATGCCGGTAGAACGTCGGGCGAGACAT 3090835 28 100.0 32 ............................ TCGAACGCTGCTGAGCGCCGAACGCATAGATG 3090775 28 100.0 32 ............................ AGACCGAGGACGGCTCGAAAACTCGGATGATC 3090715 28 100.0 32 ............................ TTCGACGGCCACGCCTCAGCCCGGCCCAGGCC 3090655 28 100.0 32 ............................ TTATTGAAATCCTCAGCGGCCTGCACTTGCTC 3090595 28 100.0 32 ............................ TGATCACCCAAGCGTGCGTATCGCGGCCATCC 3090535 28 100.0 32 ............................ TGATCACCCAAGCGTGCGTATCGCGGCCATCC 3090475 28 100.0 32 ............................ TGGGTGTCCAACATCGACGGGTCGAACTGCTC 3090415 28 100.0 32 ............................ TGCGTAGATGCCGCGATCATAGCGCGCCCTAC 3090355 28 100.0 32 ............................ TTCGGTACTTCTGAACCATACGTCGCCGCATA 3090295 28 100.0 32 ............................ AGTCATCGATGAACGACGAGCCGGTCAGTGCC 3090235 28 100.0 32 ............................ AGAAGCTGGAGCGACGGCTGGCGGCAATTCGT 3090175 28 100.0 32 ............................ CCGGACGTTCACGCTGGTGGTGAGACCATCCG 3090115 28 100.0 32 ............................ TGGCTGTCGCTGCGCTGCTGGCCGCTGTGTAT 3090055 28 100.0 32 ............................ GGCTGGTCCCAGAGCGGGTCGACGGCACGGTC 3089995 28 100.0 32 ............................ GAACCGCGCGTTCATTGCTGAAGGCCATCGTC 3089935 28 100.0 33 ............................ ACATCAGCGCCGCGGTAGCCGATGCCGATATCT 3089874 28 100.0 32 ............................ ACCATCCCCGGCCACGGGTTGCCCGACACCTG 3089814 28 96.4 32 ........T................... GTTCCATCCGGGTAGGTCACGTCCACGTCGTA 3089754 28 100.0 32 ............................ TGGAGAGTGACCCGCTCAAGACCGAGGCCGAG 3089694 28 100.0 32 ............................ TGATGCCGGACATGGGACGTTTCGCGGGAACC 3089634 28 100.0 32 ............................ CCGGACGCCCCTAATCTGGAGGGCTCCTGGCA 3089574 28 100.0 32 ............................ TTTCCCCGCGAGGCATAGCAGGGATATCTTGT 3089514 28 100.0 32 ............................ TACAAGCAGATCGGCGAGCTGAGCGGCAAGGA 3089454 28 100.0 32 ............................ TCGTACTGGTCGAGATTTCCGATTCGGAAGCC 3089394 28 100.0 32 ............................ TTCGACGCCGCTAGGGTTGCCGCATCGCCGTC 3089334 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 28 28 99.9 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGTCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCGCTCCCAAACATCCGAATATAAAAGTTCCTACCCCGCCCGCCCGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACATTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACGGGTACCTCCATTACTCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //