Array 1 106565-108318 **** Predicted by CRISPRDetect 2.4 *** >NZ_LQQV01000057.1 Brevibacillus parabrevis strain CN1 contig_27, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 106565 32 100.0 34 ................................ TTCCTCGGAAAACTTATCTTTGTGCTCTGTACCT 106631 32 100.0 33 ................................ GTAAACGCAGTGTTGAACATCAGTCACGCCTCC 106696 32 100.0 33 ................................ TCGATCCTGGATGAATCTCTGCGTGGTCGAGTC 106761 32 100.0 33 ................................ GTCTGGCAAGCGTGCGTCGTACGGGCGTCCATC 106826 32 100.0 36 ................................ ACCTCGCGGCAACACGTTAATGGTCGCAGGTCCCGT 106894 32 100.0 35 ................................ GCTTTCATCAACAATACAATTACAAGTGTTGATGA 106961 32 100.0 33 ................................ TCTCATTTTTTCTACCAGTTGCCACGCATCGAC 107026 32 100.0 33 ................................ CTCCCGTTACAGGACTACCTAGCAAACCAAAGC 107091 32 100.0 38 ................................ GAGATGACGAAGGTGCTAACAGTTCGGCAGACTTTGAA 107161 32 100.0 33 ................................ AAGTCGATTTAGGAAGGTGAATATGATATGCCG 107226 32 100.0 36 ................................ CTCAAAAAACATCATGGCATTACGGACACCGGATGG 107294 32 100.0 35 ................................ AACCATGAACTTGCGGAAAGTATCAAGTGCGTCCG 107361 32 100.0 33 ................................ GCCTTGATCCTCGCCGCCATCTCGTCATATTTC 107426 32 100.0 33 ................................ TTGAACGAAAGTGTCGCTGACACCGCGTTATCC 107491 32 100.0 36 ................................ CTTGGTCATTATGTTTAAGTAAACAAGGAGGTTTTT 107559 32 100.0 35 ................................ ATACAACGCCCTAGAGTATGGCAGCGACTTCACAG 107626 32 100.0 33 ................................ CGCATACTCGCGGATGAACCGGAGGGCCTTGCG 107691 32 100.0 34 ................................ GTAAAAGTCTGGAACTTGCAGTATGTCCCCCTCA 107757 32 100.0 35 ................................ GTCGATGGAACGGTTACACACGCGAAGGTAGGCGT 107824 32 100.0 33 ................................ ATTAAAGTCCTTTGAACGAGGACTGATAAAAAC 107889 32 100.0 33 ................................ AACCAGCATGACATTCGTACCAGTTTCAATAGC 107954 32 100.0 35 ................................ GATTGTGTATATTTGCTTGTCGATCTCATGACCTT 108021 32 100.0 36 ................................ AGAAGTGGCTCTGGATTACGGCGATGTGCGAAGCGT 108089 32 100.0 34 ................................ GGATATTGGTCTTGTGACACAAATTACATCGCAG 108155 32 100.0 34 ................................ AACGATAGTTACGCTGATTCGACCGATGGATATT 108221 32 100.0 34 ................................ GAGCGGAAACGATGCATTGTGCCAGCTGATGGCT 108287 30 78.1 0 ...........C.A......A..A.C....-- | TT [108311] Deletion [108317] ========== ====== ====== ====== ================================ ====================================== ================== 27 32 99.2 34 GTCGCCTGTCGTAGGCAGGCGTGGATTGAAAC # Left flank : TTCTGGAAGTAGGAGTGATGTGGGATGATGGTGTTGATTACTTATGATGTGAATACAACCTCTGCTGATGGGCAAAGACGTTTGAGACAGGTTGCCAAAACGTGCGAGGACTACGGTCAGCGGGTGCAAAATTCGGTGTTTGAATGTTTGATTGATTCGCAGCAGCTGAAGGAATTGCAGATTAAGCTGAAAAAGACTATAGATCCGGAGATGGACAGCTTGCGCTTCTATCGTCTTGGGACTAATTGGAAAGGAAAGGTCGAACATGTTGGCGCTAAACAAGGGTATGATCCAGAAGGGTTTTTGATGATTTAGCAGTGGATATGGCATTTGCGAACACTAGGCTCACATCGATTTGCACGGAGGTTCGCAAATGCCTGCCGTTGCTGGGATTCGAGGTGTTTTTGGTATATGCTGCTGTGTATTATGCGACCGTATAAAAGAGGTTCGCGGAAATCGCGTGAAATTCCTAGTCAGGACAAGGCTTCCTAGGTATTGCT # Right flank : AGAATTTGAGGAGCTGTTTAGGGCAGTGACACTGACTCTGGTGGGAGTCCGAACTGGTCAGATGTACTACCAAAAACAGAGAAAGCTTAAAAAACTATTGAGGGTCTTTAGCTCAGTCGGTAGAGCGCTACACTAGCGGTGCATAGGCCAGTAGTTCGATCTCAATAGTCCACCATTTAAGTTTATCGAGGACAGGGAGCAACTATGGCTGAGGCAATATGCCAAGCAGCCCTTAAAGCTGTGGCTTAACACTACGGTAATCTAGCTAAATTCGCTTTGTTCGCTCATCTCTCAATTTTATTACACAGTGTAGCAAGGAACAAAACATACAGACAACTAGGATCACTGCTTGAGTATCAATAATTGTAGAAAGGGTGTAGGTGCTCATAACTTTCCACAGTCCAAACACGATCCAAAATGTCGAAAACAGAATGCCGAATAACCAAAAATATTTCATACGGCCACACCTCTTTAGGGGAAAGTCACAGGTAAATCTTATC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCTGTCGTAGGCAGGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : NA //