Array 1 1306204-1302469 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072347.1 Prevotella melaninogenica strain F0516 chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 1306203 47 100.0 30 ............................................... CAAATGGTCTTGTTACTTCCGCTCAACTCC 1306126 47 100.0 30 ............................................... GATACTATTGACGCTATGTTTCGTCAATCG 1306049 47 100.0 30 ............................................... ATGAGTAAGCGCTCAACTCGTGATAGCTTC 1305972 47 100.0 30 ............................................... CACTCCTACTAAGTTACGACGTGAGTATAT 1305895 47 100.0 29 ............................................... ATGAGTAAACGCTCAACTCGTGATAGCTT 1305819 47 100.0 30 ............................................... CTATTAAAACAGCTGAAGAAACTACTGGTG 1305742 47 100.0 30 ............................................... GCAGCGCAAAGAGTTTGAGGAGAAGCAGCA 1305665 47 100.0 30 ............................................... CCAACGATGCTGCTCAACGTGCATATGATA 1305588 47 100.0 30 ............................................... TGGGAGTGTAACCCCTCTGAACATTTTCAA 1305511 47 100.0 30 ............................................... GTTTTGTTGCTTCTCTCTCTGATTGCTGGT 1305434 47 100.0 30 ............................................... AATACTAAGCGTCAACATATGCACGCTTTG 1305357 47 100.0 30 ............................................... TTAACTGTTCCTGTAAGTCCTAAAGAATTT 1305280 47 100.0 30 ............................................... CCAGTTTGCCTTGGTGAATTTTGTCATAAT 1305203 47 100.0 29 ............................................... TTTCCGCTCTAAACAGCGTGAAACTACTT 1305127 47 100.0 30 ............................................... CAGCTTGGTGACCTTGCAGGTAAAGGACTT 1305050 47 100.0 30 ............................................... TAGGGGGCTGAAAGCCCCCATAGCGATAGC 1304973 47 100.0 29 ............................................... TACTCCAACTAAGCTGAGACGTGAGTATA 1304897 47 100.0 30 ............................................... TTCTGCAGAGCGGATTCTATTTTCTTTTTT 1304820 47 100.0 30 ............................................... CTTATGATACAGACTTCGTCTCTGCTAATA 1304743 47 100.0 30 ............................................... TTCTGCTCAACTGCAGATACTCTCACGTCT 1304666 47 100.0 30 ............................................... TACACCGACGAAGCTGCGGCGTGAATATAT 1304589 47 100.0 29 ............................................... CTTCGTATGCAGAATTATCTCAAGTGGTA 1304513 47 100.0 30 ............................................... AGTGTAGCTGCCCTCTCTGCTCCGTTCTCT 1304436 47 100.0 30 ............................................... TACTTATAAAAATGGTGGTGTCGTTTGCTT 1304359 47 100.0 30 ............................................... ACACCTTGCGCCTTACTGTTGTTATGCTCG 1304282 47 100.0 30 ............................................... ATAGGGGGCTTTGCCCCCATAGCGATAGCA 1304205 47 100.0 29 ............................................... CAAGAGATTACGGGAGAAATCTTGCAAAA 1304129 47 100.0 30 ............................................... TGATGCAACTGTTACTGCTAAAAACGGTAA 1304052 47 100.0 30 ............................................... AACAACTTTTCGTTAAAGTATGATGCGCCT 1303975 47 100.0 31 ............................................... TATAGGGGGCTTTGCCCCCATAAGCGTCCAG 1303897 47 100.0 30 ............................................... GGTGAATTGACTGCAAATTCTAACATGCGA 1303820 47 100.0 30 ............................................... AATAACCCTATTTTAGCCGCAGGAGAAATT 1303743 47 100.0 30 ............................................... GCGTATTTGTCTGCTTCTGTGGGAACTATT 1303666 47 100.0 30 ............................................... AACGAACAAGATTTAACCCCGGTTGAGGCT 1303589 47 100.0 30 ............................................... ATGAGCCGAGAAATAAAGCTAAAACTTGGA 1303512 47 100.0 30 ............................................... AGTTAACGGGTCAATGTCTACGATGGACGT 1303435 47 100.0 29 ............................................... TTAGGTATCAGTGGGCAGGCGTTAAACTC 1303359 47 100.0 29 ............................................... TACTTACGAAGATAATCAGAAGCACGAAG 1303283 47 100.0 30 ............................................... AAAGAAGATGCTCGTTCTAAGAGAATAGCT 1303206 47 100.0 29 ............................................... GGTTACTAAACTTTGCACGCTATATGCAG 1303130 47 100.0 30 ............................................... GGACAGGCTCTTGGTTCTCGCGGTGGTCTT 1303053 47 100.0 29 ............................................... GATTATTGTACATTCAATATAGAAGAGCA 1302977 47 100.0 30 ............................................... ATGGATTAGATTGACTTTAGAGCAATCTGG 1302900 47 100.0 30 ............................................... GTACGGGTCTTCTGATTATGCTAACCCTCT 1302823 47 100.0 30 ............................................... TCGTGATGCGCTTGTTAATTCTCCTTTATA 1302746 47 100.0 30 ............................................... CGTTCTGCTTATCTCGGTATCATTAGTTCT 1302669 47 100.0 30 ............................................... CACTTGGATAGGTTTGTCATTGAAAAGTCG 1302592 47 100.0 30 ............................................... CCATACGGAGCGGGAAAAACAATACCGTAG 1302515 47 95.7 0 ..........................................G...A | ========== ====== ====== ====== =============================================== =============================== ================== 49 47 99.9 30 GTTGTACGTGCTAATGCAAAGATACACATTTTGAAGCAATTCACAAC # Left flank : CAGCTGCAAGTCTTGCAAAGTGCTATAATGGGGAAGCTCGTGAAATTTCTTATCCTTCTTTTCTTTGATGCAACGACTTAGCGAATATAGGGTTATGTGGGTGATGGTCTTTTTTGATCTTCCAACGAATACAAACAAGGAAAAGCGTGCTTATACTATCTTCCGAAAAGATTTGATGAAAGATGGTTTTACAATGTTTCAATTGTCAATCTATGTTCGTCATTGCGCAAGCAGAGAGAATGCAGATGTTCATGTGAAACGTGTAAAATCGTTTATGCCTAATTCTGGTAATGTCTGTATTATGGTCATTACTGATAAACAATTTGGTGAGATAGAGCTTTTTCGTGGAACTCAGCCACAAGAACCTAATGCCCCAGGACAGCAACTAGAATTATTCTAAAAAAGAGTCCCATCATTGTGATAGGACTCTTTTGTTTTGCATTTTTTGTTTGTACAAAAGTCTTGTTACTTGCTGTAATACAGGTAAATATAACTTTTAA # Right flank : TAGAAAAGCTTTGCTTAGATATTAAACAGAGTTGTATGTGCTAAAGTCTGCAGCACATCTCATTTGTTCACGGATAAATTCTATCCCTATGCCTTTTTACCAGACACAAGGGTGAAGATGATGAGGATGCCGATGACGAAAATGAAGAGGAAGGAGCCTAATGCACCGGCATAGATTCTACCTGTGTGTACCTCTAAAGCAAGACTCCAAAGCGACATGGGTTTATCTTTCAATTCTTCTGGCTGTTTTGCGAAGGATGAACCTTGGAAATAGGTTGCTATACATTCCTTGTTTGTGAAATCAGAACTATAGCCAGAGATTGTCTGTTCGTCTGGTGCAGTACCCGGTATGCGGGGAGTAGAGACCATAGCATCATTGTAGTAAAGTACGACGTTATTCTTACGATCCCAGTAGAACAGACCATCGAAGGAGCCTACTATCCATGATTTGTTGTCTGCATGTTGCCAAACATTTTGACCCATAACACTCACTGGGGGTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTACGTGCTAATGCAAAGATACACATTTTGAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA //