Array 1 57547-56856 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFUE010000020.1 Clostridium chauvoei strain 12S0470 contig00020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 57546 30 100.0 36 .............................. TAATTGAAACTAGTATCACTGATTCTTTTTTTTCTT 57480 30 100.0 36 .............................. AAAGGATTTCTTGTTCCGTATTTTTTAGATAAATTA 57414 30 100.0 37 .............................. GGCACTTGGTAAAATATACCTTTTGCTTAAACTCTGC 57347 30 100.0 35 .............................. TAAAATACCACTCTTCTATTAATCTTTGGCTTGTA 57282 30 100.0 37 .............................. ATCTGCTTAGGATAGTCTTGTGTTTCTTCAAAGCTAG 57215 30 100.0 36 .............................. ATTGATGGAATGGTTAATTGATTATAAGAGATTGAA 57149 30 100.0 35 .............................. CTTATCCATCTGCCCATACCAGTTATACCATTCCA 57084 30 96.7 36 .......................G...... ACATATTTAACTTTCAAAAGCAACTGATTGCAATTC 57018 30 100.0 37 .............................. ATGGTAGGCAATATATTTGTTGGAACTTATACTAAAG 56951 30 100.0 36 .............................. GATTTATAGTTTTGACTATGATGATGAGTATATATA 56885 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 99.7 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : CTACGCTAGCGGAGCTATCAATAATATTTGAAGATCAATTAAAAGATGAATTAGCTTAAAAGCTTGTACTTTTTATAAATTATATGCATACTATTAGATTTTTTTGAAATACTAAAAAAGGTAATAAAAAACATTATTAGTATTTCTTAAATATAAAAAAATATTACTGGAAATGAAAATTTCCAGTAATATTAAAATAATAAAAATGATAATTACACAGAATTATCTATTCTCTCAAATATCCTAACAATTAAGTATTATCTCTTATTCCCCT # Right flank : ACAAGGCAATTTGAGTACTTGAGTATACCCAATTTGATAGACACATAGAAAGTACGTATAATAATAATTAAGAAGGATGTGTTTATTAAATGGGAAACCAAAGAAGATTTACTAAAGAATATAAAGAAGAAATAATTAGGCTAGTAACAGAACAAGGTAAAAAGGTTTATGTTGGTGATATTACCTATATAAGTACTGAAGAAGGCTAGTTGTATTTAGCTACTGTAATTGACTTATTTGATAGACGTATTACAGGTTGGGCAATGGATTCTACTATGACTAGAAGACTAGTTATAGATGCCTTTAATACAGCTGTATTAAAGGATGTTGTTATGATAATGCTTGTGCAGAATTATTCTTCTTATCTTTAAAGAAGCACTTTCTTTATGGAAGAAAATTTAAAACGAGAGCGGAATCAAAACAAGCTATAGTTGAATATATTGAATTATTTTATAATGCAAAAAGATTACACTCTACCTTAGGGTATAAGTCACCAAGGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 1580-237 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIFUE010000042.1 Clostridium chauvoei strain 12S0470 contig00042, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 1579 30 100.0 35 .............................. GAAGTTAAATGGATAAGAAGAGTATGTGTACATAA 1514 30 100.0 35 .............................. AGATAACAACTGGAGAATAAAACCTATAGAAGAAG 1449 30 100.0 37 .............................. AAATTGTGTTCCGCCGGGTGCAAAATTCCCTTATATA 1382 30 100.0 37 .............................. CAGGAGTCGTTGTATTTGATGAAATACATGAATATGA 1315 30 100.0 36 .............................. AAAGGAGAAATATATAGAGTTGATAAAAAAATATTT 1249 30 100.0 36 .............................. ATTCTCCTAAAGATGATAAGAATGAATCTTTTAATG 1183 30 100.0 36 .............................. AGATAAGCTAGGTAGTGACCCTGCTGGAAAATTACA 1117 30 100.0 36 .............................. GCTGAATCTGGTGAGGACAATGTTGATATAACAATT 1051 30 100.0 36 .............................. TTTGTGCAATACTATAGATATAGCAAGTGCAAGTTC 985 30 100.0 36 .............................. CATCTGACACTAATAAAATAGAACTAGAGATTTACA 919 30 100.0 34 .............................. CCTTCTGATGATATAACATTTGCTATAAGTTGTG 855 30 100.0 36 .............................. GTTAAAAATTTTCACCCACAAGGAACTTTTATACAA 789 30 100.0 35 .............................. AGTGAAAAAGAAAAGGAAATTAGAAAGAAAATAAG 724 30 100.0 35 .............................. AAGTCAGTTTATGTGTGGATTAATCCAAAAGCATT 659 30 100.0 35 .............................. ATTCTTTGCTTTTATCTCTATATTTAACTATCTCT 594 30 100.0 36 .............................. CAGAAAGGCTAGGAATTCTAATAAAGAGTACGATGA 528 30 100.0 36 .............................. ATTGTAAATCAAGTGAGACCTTTCCCAACACCGGCT 462 30 100.0 34 .............................. AAAAGGAGCTGATGGGAATCAAGGACCAATTGGA 398 30 100.0 36 .............................. TAAGGAAATGTACAACAGTATAATTGGTAAAATGAA 332 30 100.0 36 .............................. GGTAGAAAATAATGATGAAATAAAATATTGTTTTTA 266 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 21 30 100.0 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : ATAAAACCTTTTTACCATTTAACTTAAAGGATGGGATGTAAATTGAAAAAACAAATTAATTATAATTACGTATTTATATTTTATGATATAAAGGAAGAACGTGTAAATAAAGTATTTAAAGTATGTAAAAAATATTTATCACATTTTCAAAAATCAGTATTCAGAGGAGGAATAACTCCTTCAAAATTAATTTTATTGAAAAAAGATTTAAATAAAGTTATAGAAAAAGAAGAAGATTTTATATGTATTATTAAACTTTTAAATGGGGATGTTTTTGGAGAGGAAATAATAGGAGTTCAAGGGCAAACAACAGGAGAAAGTTTAATAATATAAAATTACCAACCTAATAATATAGGTTAGAGCTTTAAAATACTACGGTATAAGTTATTTTTGTATTTAACTTTTATTTATAATAAAAAGCTGGTAATATATTTATATAAACATTATAAAATGGGCGTTGCATAGATATATAGTTATAAAAGAACTCTCATTTTTCTAAG # Right flank : TATCCGAGACAGTAGATAGTTTTGTGTAAAAACAAAACTATCTACTGTTTTTTGTATTAACAGTTGGAAGTTTTGGAATAATATACTATATAAATTAGGAGAAATTATTCTGACAAGAAAAATTGATACCAACTTTGATTACAATGAGGAAATTAAAAGATGCAAAACAATCGATGATGTAATGGGTAAAAACGGATTAATACAAAGATTAGTTAAAGATGTTCTTGAAAATATATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //