Array 1 1119256-1122574 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOJF01000003.1 Chitinophaga sp. YR573, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 1119256 30 100.0 34 .............................. TGGCCTGCTTTGTGAAGGGATATTTTTACGCCTG 1119320 30 100.0 35 .............................. CTACAAACAAAACAGACGAACTGGATCGGTATGGA 1119385 30 100.0 35 .............................. ATAAACCTAAGTTCGTTAACCTGTTTAAAGCAATC 1119450 30 100.0 36 .............................. TAGTCTTTGAGGTACATTTTAACGCTGGTTCACCTA 1119516 30 100.0 37 .............................. ACGGACGACAGAATGTTTTACCCCTGTAAGCCGGATA 1119583 30 100.0 35 .............................. ACCCGGCCAGGATAGTAGTCCTGGCCATTATCTTT 1119648 30 100.0 36 .............................. ATAGAGAGAGGATTAAATCATTCTCACCTTTAAATT 1119714 30 100.0 35 .............................. GGGAATGCAGGATCTTTCACCCATAATAATATAAG 1119779 30 100.0 36 .............................. TTTAGTGCAGGCGGTTATCCCGGCGGCTACCCTGGA 1119845 30 100.0 36 .............................. TCATCGTGAAGTATGGCAAACACTGGTTTGCGATAA 1119911 30 100.0 35 .............................. TATTGGGAGGGAAATCAAGAAAGCGTCGTAAGCAA 1119976 30 100.0 36 .............................. CTCCATCCACTATACCGGTAGCAATGCCAACACCCT 1120042 30 100.0 37 .............................. CATACTACACAATCGTGTTTGATCCTCTTTTTAGTGA 1120109 30 100.0 37 .............................. TCCATCTGGCTTAATAAGATCAACGCAGTTATGAAGT 1120176 30 100.0 36 .............................. GGTCTATAATTCGATTTAATTTTATACAATGAATGT 1120242 30 100.0 36 .............................. ATAGATGATGAGTCGGAAAACGATGACGGTTCGCTA 1120308 30 100.0 37 .............................. TAGGTGAGCTTGTTGACTGCTGTGTGACTAATAATCC 1120375 30 100.0 36 .............................. GGCCCGTCCAATTAAATACTAACTATTCCCAAAAAA 1120441 30 100.0 36 .............................. TTCTATCAGCTGGGCAACAAAGCTATCGGGATCAGG 1120507 30 100.0 36 .............................. CAAAGGGGTTTTCAAGGATTCAGATATGTAACAGAA 1120573 30 100.0 37 .............................. TTGAAATAGATATCGCGCACTGCACCTGTAGTTCCAT 1120640 30 100.0 37 .............................. AGAAAAACAAATAGCTGATGAAAAAGCTCTTAGGCAG 1120707 30 100.0 36 .............................. ATGGGCGTGAAAAGAGTAGTGCTTTGTGTGCCTAAA 1120773 30 100.0 36 .............................. CTATGCGGAGATTGATTAATATCTGATACTCCACTA 1120839 30 100.0 34 .............................. TCGTCTGACACCTGATCCATGTTACGATACCAAA 1120903 30 100.0 35 .............................. TGTATATCGCTGCCATGATTTCTTTATCGATAAAG 1120968 30 93.3 36 .C.G.......................... CAGGATTAAGGGTTTGTAAAGACAGATAAAAAGTTA 1121034 30 96.7 35 ...T.......................... AACACCATAGCAGTGAAATTACTAGATGGGTCCCC 1121099 30 80.0 37 AC.G.....AC......T............ TTAGATATCACAGAGTGAAATAATTTATTGCGGCTAT 1121166 30 90.0 36 ...T......C......T............ AAAAATGAGAGGCATAGACAAAATCTAACGAGTTTT 1121232 30 90.0 35 .G.T.............T............ GAATTGGTAAGTAGTTCTATATTGTTCTCTTTAAA A [1121240] 1121298 30 93.3 36 ...T..........G............... AGCAACTACGATCTGCGTTACATCATCGAGTACACA 1121364 30 90.0 35 .G.T.............T............ TCTGCTCATACCTGCATTCAGATATATCATCCCTC 1121429 30 90.0 37 ...TT......G.................. ACGCTAACGTCCGACATATAAGACAATTGCGCCTGGG 1121496 30 90.0 36 ..AT........G................. TATTATTTTTAATGCTCTCATGTTTACTTTTTTAAT 1121562 30 90.0 37 ..AT........G................. CAATTTATTGTAGTAGATAGCATTCAATACTGGAACA 1121629 30 86.7 38 ...TT.....C......T............ ATCACCGTTCCTGCCAGTATTTTAGTAGCTGCGCTCAT 1121697 30 93.3 35 ...T......C................... CTTTACCCATGTCATGCACCGCACCGCCGCCAACG 1121762 30 90.0 36 .C.G.......G.................. CTCTTATAGATCACGTATTGAGCAGCACTGGGAAGC 1121828 30 86.7 37 T..T............T.......G..... GTATTACTGTAACTAGTGTTCCTATCGCCAGTGTTAT 1121895 30 93.3 34 ...TT......................... TGATTAAGACTGCAACGTTTTAAAAGATCGTCAT 1121959 30 93.3 35 ...T......C................... CTTTACCCATGTCATGCACCGCACCGCCGCCAACG 1122024 30 90.0 36 .C.G.......G.................. CTCTTATAGATCACGTATTGAGCAGCACTGGGAAGC 1122090 30 86.7 37 T..T............T.......G..... GTATTACTGTAACTAGTGTTCCTATCGCCAGTGTTAT 1122157 30 93.3 34 ...TT......................... TGATTAAGACTGCAACGTTTTAAAAGATCGTCGA 1122221 30 93.3 36 ...T......C................... TCCGGAAAGTTAATTGAGTAGTCCAGCCCGTTAGGT 1122287 30 90.0 36 ...T......C.G................. ACTGGAAAGCAATATTGCCATACCTGGGATACTCCA 1122353 30 83.3 30 ...T......C...G..T........G... ATTACAGACACAAGTGATATAACATGAATA 1122413 30 83.3 38 A..TT...........G............A GATTCAAGCATCATAGAACTAAATGCAGGAAGGAATGT 1122481 29 83.3 35 ...-T.....C...G..T............ TGTATCTATAACAATAAAATACACACTATGCAAAA 1122545 30 86.7 0 ...T......C.............G....T | ========== ====== ====== ====== ============================== ====================================== ================== 51 30 94.8 36 CTTCCAATTGTACCATAGAGGAATTGAAAC # Left flank : GAATATAAACCGTTTAAAGCCTGGTGGTAGATGTATGTGATTTTAGTATATGATATAGAAGAGAGACGGGTCAGCAAAATGCTGAAATTATGTCGCAGATACCTGAACTGGATTCAGAATAGTGTATTTGAGGGAGAGCTAAGCGAAGTGAAACTTAAAGAATTGCTTGGTGAAGCTAAAGGGATTATCAATAAAGATAAAGACAGCATTATTATTTTCAGTAGCCGTCAGGAGAAATGGTTGGATAAAATGGTTGTTGGCAAGGAGAAAAATGAGCTGAATAATATTTTGTAGTCGTCGAAGAGGCTTTTGTGAGGTTGTGATTGTTAAGATCTTTGACATTTTGGAATTAAACCATTGATTTTGTTAGCTTTGGGGATGTTGTCGATGTCTGGGGGGAATTTTATTATTGTATATCGACGACTTTTATTGTTATAAGAGAGGAAAGCGTATCTTTGTTTATGGCCCTTTTAGGGCTTTTTTTATGGCCGGTTTAACGG # Right flank : TAAAGGATGGATGCGCCGTAAAAACAGCAAGACTTCTTTCAAGTCCACTACAAAAGAATGAAAGCTTTATTACAATTTGAATTATAACCACGTGCTGTACTATAGAATAAAACAGGCAATCAAATTATTGATCGCCTGTTTTAATTGCTTACTGGCAAAAATAACTCCACTTATCCAAATCCCTTTTCTTTAGCACTGCACTAAATTTCTTTGTTTTTGCTGCAGGGCATACCGTAGATTGAAACTTCGCCTGCGTCATTTCGTCTGTGTATTCTGTTACGAAGACGGGTTTGTTTTTGGTGATGTAGGGTAGCATATCGTCCTGCCAGCCCTGGTCGAAGGCGTCTTCGGTGAGTGCCCAGTCAAAGGAAGAGGAGAAGTCGTCAGTAAGTTCGGAGACGTTCTTCTGGCCGATGCCGAGGCCCATGGAGTGGGCGAGAGTGATGAGATAAGTGCAGAATGCTTTGGTGTCTGTGATAGAAATGTCGAAACCGGTTTCG # Questionable array : NO Score: 5.75 # Score Detail : 1:0, 2:0, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCCAATTGTACCATAGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-53] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //