Array 1 14197-15379 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUT010000021.1 Anoxybacillus flavithermus strain WS5285 21_31444_37.3398, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 14197 37 100.0 35 ..................................... GAGGAAATTTCGATCTCTGACGGATCGACTTCTGG 14269 37 100.0 37 ..................................... TTCTTCTGTTTTGAACTCAGCGAGCTCCTCAATCCAC 14343 37 100.0 33 ..................................... AACTAAATCACCCCTTTAAAAAATGCGCATAGT 14413 37 100.0 36 ..................................... AATTGCCTGTATAATGTCTGTTATATGGGTAATTCA 14486 37 100.0 35 ..................................... ATAAGTACGTTTAAGCACATAAAGCGAGCCTTTAT 14558 37 100.0 33 ..................................... AACCAAGCTAGCCGCTTCTGTAATAACATAGTC 14628 37 100.0 36 ..................................... AATTGCCTGTATAATGTCTGTTATATGGGTAATTCA 14701 37 100.0 33 ..................................... TATCCCGTCCTCTTCTTTTCTCCATTGAGCCAC 14771 37 100.0 34 ..................................... GTGAGTGTCCGATAATTTTCTCTTTTGCATCCGT 14842 37 100.0 33 ..................................... CACGCCATCACGCAGCCGTACCCATCGACTGAT 14912 37 100.0 36 ..................................... CTGTCCGGCTGATCAATAAGCGCATTATATTCGTAT 14985 37 100.0 34 ..................................... CTGTTTGTGGGGAGAGCCCCACACCCCCTCCCGC 15056 37 100.0 34 ..................................... TCGGTGCTATAGCTGTGGCTGGTTTGGCTGCTAC 15127 37 100.0 36 ..................................... TCGTTCCAGGAGAGAAAATGGGACAAAATGCTGCAA 15200 37 100.0 35 ..................................... CGTTCGGGAGTCGTGACTATTCTGTGCTTCCTCAC 15272 37 100.0 34 ..................................... TTTTACGCTACGCTAGAAAAAATTTTTCCTCGTC 15343 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 17 37 100.0 35 GTTGCACCCAGCATAAAAGCTGGGTGAGGATTGAAAC # Left flank : TGACATATGATGTTGAGACATTGGAGTCAGATGGTCAAAAACGATTACGAAAAGTAGCAACTATTTGTCAAAATTTTGGACAACGTGTGCAAAAATCTGTTTTCGAGTGTAATGTCAGCCAAGCGCAGTTGGAAGAAATGGAACATCAATTGTTGAAAGTTATTGATCTAGAAAAAGATAGCTTACGAATATATACGTTATATGGTCAACGATCCAAAGCAGTTCGCTCCTATGGAAAGGACCATTACATTGATTATAATGATCCGATTATTTTGTAAGAGTAGAACATATACAATATGTGTAGCAGTTATGAATTTTGGTGCGCGAACATAAAGCAATAGTAAACAATCAGGAGGATCGCGATGAGTAAAAAAGGCTTAGTAAAGCGAAGATCCAAAAATTCATCAGAGACTATCTTTAGCCACAATGCACACCAGACAAAACAGTTCGCGTTTTTATACTTTTACACTTGCTTCACGCATAGGATTGAAGCGTAGGCA # Right flank : CTGCAGAAGGAAGTATTGCGTAATAACGTATGTGCTGAAACTGTCGTGCGCATGACGATGTTGATCGTGGAACAATTATCAAATAAGTACATGCAACTGTATAAACATAAACAATATGATCCCATTCGGCAAGGGGATTTGCTTGTACGGGAGTTAGAGGAATATGTGAATATTATAAAATATGGAATTTACAAGTAAAGGCGGGGCTTTTCCCGCCTCATTTATTTGTAAGAAAATTATTGAAATTTTCTGTTTTTATATGATATGATATTCTCAAGGAATTTGAAACTATGTTTCGTAATACGCAACAAAAAAGAAAGGGGAATAATGATGGGGGAATATGTACAAGTTGGACGTTTGCAAGTCGCTAAGTTGTTTTATGAATTTATCGTTGAAGAAGTATTGCCAAATAGCCAAGTAGATAAAGATAAATTTTGGAAAAACTTTGAGCAACTCATTAATGAGTTAACACCAAAAAATAAAGCGTTGCTTGCCAAACG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCAGCATAAAAGCTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.80,-13.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 1870-2845 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUT010000030.1 Anoxybacillus flavithermus strain WS5285 30_20843_31.8813, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1870 30 100.0 37 .............................. TCGTCACCATGCAGTTTATACATGCTTTTCACCTCAA 1937 30 100.0 38 .............................. TGTGCTTGCGTTTCCGCAAGTTGACGAACGTCATGCGA 2005 30 100.0 38 .............................. CATTTCGTTCCGCGTGCCTTCTCATGATAGTAACAAAT 2073 30 100.0 39 .............................. CTATCTATTTCAAGTAAAACCCCCTCATAGAAATTGCCT 2142 30 100.0 39 .............................. GCGTTAATCTCTTTTCGTTTCTCTTGTGGTATCGTAATA 2211 30 100.0 38 .............................. ATTCTTGTGACTATTATGTACGTGTATCGAAAGCTGAC 2279 30 100.0 38 .............................. GGAAGGCGCGGCATTTTGAAGAGATTTCCATTTCCGAT 2347 30 100.0 40 .............................. TTAATAAGAACGTTAGGATATCTTGCAGGTAAATATTCTG 2417 30 100.0 35 .............................. TAGTCAGTAAAGAATTCCTGTATTTCCTTTGTGTG 2482 30 100.0 37 .............................. TGATTTTGACTTGCTGATTGATTTCTTGCTCGAAGGC 2549 30 100.0 37 .............................. TTCTCCAAAGCAAGTATACAATCTTCAACATCAATCA 2616 30 100.0 37 .............................. TTTGCCTAAATCGACAAACCAAGAACCGACATTTGAA 2683 30 100.0 35 .............................. TGAATAAGTGGATAACATCATCGTCACTCTCAAGT 2748 30 100.0 37 .............................. ACGACATTTGTTCAACTTTTTCATACCATATTTACAA 2815 30 86.7 0 ......................G...CC.T | T [2840] ========== ====== ====== ====== ============================== ======================================== ================== 15 30 99.1 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : AAGATGATTTAAAGCAATTATCCTTTACTTGTCCGCTTGTTTCCGATGAAAAAAATAAAGGACAATCAAGTCGATGAATTTGCTCGCTATTTAATCATTAACTACCATTTTGGAGTTCATATTATTCATCGTGATTATGTAAGAATATGCTATGAAATTCGCTCTAGAGATCGTCTTGTTTGGGTAAATATAGAAAACAAAAATAAGAATTCATGCACATATGTACAAGGTGATTTGAATTTATTTGACGAAGTGTACCATATTTATATTGAATTTGAACGTATCATAAGTAAAGTACTGTAAAATCTACTTATTGTGAATTTATTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGG # Right flank : TTGTGATCAGTTTTATATTTACTTTGTAATGTTTTGTGTTAGGGGTAGTTTCCTTAATTTCCTACTAATCCTTTTTATTTTTTAGAGCGCTGGTCAGCTATCCTCAACCTCTGTTTTTATGTTACTTATTTCAAAGAGTTATATTAATTTAGAAGGAATATATTCCTTTTATGTCGTATTTTATGGTAGGTTAGTTTATTTAGAAACGAGGTGTGATTTTGCTAGCAGAAGCAGTTGTTCGAGTAGGCGAGTCGCTTGTGAGTAGTGATTTACCTTTAACGGAGCGTATTCGTTTGTTAACGGATGTAGATAATGAAGCTTGCAAGAATTTTTTTGAGCACGTCTGGGTTGTGGAATGCATAGAGGAACAAGTGAACGTTCGTTTGATGAGAATAGGAGAAAAGGTGAAGGAAGGTAAAAAAGAAACGTTTGTTGTTGATAGAGCTAAAAACGTTGCCTTTCCTATCATTTATCCTAATGGTGGGAATCCGCTAAATGCC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 11834-12704 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUT010000030.1 Anoxybacillus flavithermus strain WS5285 30_20843_31.8813, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================================================== ================== 11834 30 100.0 38 .............................. TATTATATCATCGGTTTTATTTTTTGTCAATGTATTTT 11902 30 100.0 37 .............................. ATATGATCGCGAATGGTCGTCCAGTCGGTGAACTTGC 11969 30 100.0 39 .............................. TCGCCACAGTCATGACATAGCAAACGATCCGCGTCATGC 12038 30 100.0 35 .............................. CTCCATAACATCATCCGAAACATTCATTTGTTTAG 12103 30 100.0 37 .............................. TTCGTAATGTTTCCGATGGGTTTGAGAATGTCGGCTC 12170 30 100.0 39 .............................. ATGCTTTCAGCAACCCAATGACTGTTTGTGCTGTAGCTG 12239 30 100.0 38 .............................. TACCTATACTCTCCGGGATCGCCGCCGGGTTTGCGGTA 12307 30 100.0 36 .............................. AGATCATATCCCGCTTAGCTATTACTTTTCTCCGCA 12373 30 100.0 39 .............................. AGCGTAATGTTTAACGCTTTTTCCTTCTCGAGTGGGAGA 12442 30 100.0 38 .............................. ACAATATCAAGCACCGTCATTGTCATTCAGCTGCCTTT 12510 30 100.0 38 .............................. TTATAAAACCTGGAAGCGTTTCACGCCGACGATTTGTC 12578 30 96.7 68 .............................T ATCAATAAAAAATACCTATGAGGAATTGAAATATCAATAAAAAAATGTTAGCCAAAAAACATTTTGAT 12676 29 83.3 0 ....T............A...-...A...A | ========== ====== ====== ====== ============================== ==================================================================== ================== 13 30 98.5 40 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : ACGTTGGATGGAAAGAAAAAAACACAGTTTTTTGATCCGGACGACGAAGTGTTTTCACATTTAATAGAACGGAATTTTTATAACAAATATGAAGCATATTACGGTGTTCCACCAAGCGATCGGCTACTCATCGAACCTGTCGATGTTCGAAAATGCGATCGGGTCGTAACGAGCTTTAAAGGCTTTTACATTACAGCGTGGAAAGGGCGGTATAAGCTCATTTCTTCTCCGGAAAATTTAACGTTTTTGTACCGTGTAGGTATCGGTGGACGAAACTCACAAGGATTCGGCATGTTCCGCATCATAAAAGAAAAGTGAAACATTTCACAGCTGTCGTCGACCTCCAATCGTGCAAAAACCCCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGTGATATCAATAAATACAGAGTATTGACTGAATTTTCGGATGGATATATAATAGAGTTGTATAGCTTTTCCATATGTTGATTTATCAACGCTTTTTTGGG # Right flank : AAGCTGTTCCGAAGTGTTGTTCGGAACAGCTTTTTTGTTGTCTATACGTTCCAGAGACCTTTCTTTTGTTGGCGTGCTTTTCGTTCGGCTATACATCAGTGTATGAACATTTGTTATAATGTATTTACACGATTATTTCCTTTATTGACAATGATAGATAGATAATCCTTTTTCACTTTTATTTTTTTAGATATTTAAAAACGTGATAGTGAATTTTGTCGAATTTATTCACACAAACGTTATATAATAGTAGTAAAATAAAGGAAAGATAGAAGCTGCAGGAGGTAACACCATGGATTCTATCCAATTTCAAGATAAAGTGTCGTTTATATGGACAAATGCAGATTTATTGCGCGGAGATTATAAGCAATCGGAATACGGAAAAGTGATTCTACCTTTAACGGTGATTCGGCGCATTGATGCGGTGCTAGAGCCTACGAAGGAAGCGGTTCTTTCCCAATTGGAAGAATTAAAAACGATGGGAATGACGATTGAAGACG # Questionable array : NO Score: 9.01 # Score Detail : 1:0, 2:3, 3:3, 4:0.93, 5:0, 6:0.25, 7:-0.17, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 12014-12938 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUT010000041.1 Anoxybacillus flavithermus strain WS5285 41_17564_34.9597, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================ ================== 12014 30 100.0 39 .............................. AATATCTGAAAAATAACTTATTGTAATGCTGTAAATCGA 12083 30 100.0 39 .............................. ATCTACCATTAAAAACGTTCCGTTGTCTAATAAAATCGC 12152 30 100.0 36 .............................. ATAAAGGTGTGAAAAAATCTAAACATCATCCAAACA 12218 30 100.0 38 .............................. TCCCACCAATCGCAAACTTTCCAGCGCGATTTGTTTGA 12286 30 100.0 41 .............................. TTTTCTGCGTCTATATCTATCGTAGTTTATGCTATCCCCTT 12357 30 100.0 40 .............................. ATCGCTGGGTGGCTCCCTTTGGTAAGCTTTGCCGAGGTGC 12427 30 100.0 38 .............................. TACGATAGTTATGCAAAGATCGAACGTTTGAAGCGTAC 12495 30 100.0 39 .............................. GAAATCGTACACTACTGTGTAACCGTATGAATCGAGAAG 12564 30 100.0 38 .............................. ATTGCTTTGCTTCCTCGATTTTGTTTTCCGCAAGAAGT 12632 30 100.0 44 .............................. GCTTTAATTTCTGTTCCTGTGTACTCTTTGATTATCTCATAAAG 12706 30 100.0 37 .............................. CTCAGCTTCGTTCCCCAACGTCTCCAACTTCCGTAAC 12773 30 100.0 40 .............................. ACAATACGAGCAGCACGATATTTACCAGATTTCACAAGAG 12843 30 96.7 36 G............................. CCTAAATGTATATAAAGAAACTTGTGTCCATAATCA 12909 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================ ================== 14 30 99.8 39 ATTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TATTGTTTGGCTTTTTTGAAACATATGTGAAATTATCAGACGAAGAAGAACGAAGACTGCGAAGCGAGGTGAATGAAATGGAGACGAAAGAAAAAGAACAAGTGATGGAGTTGATTATTTCGTATGAACAAAAGGCGTTGGAAAAGGGAAGAGAAGAAGGGATAGAACAAGGAATCAAACAAGGAATCAAACAAGGGATGAAGCACCTTGTACAAACGATGGCCAAAAAAGGGATGAGTGTAGAAGATATCGCAAACATCACAGACCTTGCGGAAGATGAAGTGCGTGAGTTGTTAGAAAAGGAATAAGTAATTTGCGCATAATTTCACAACCGTCGTCGACCTCCAATCTTGCAAAAACCCCAGGGGATCGACGACAATTTGTTTTTTGCAACTTTTTTAGACGTATCAACGCATCAAGACGATTGACAGAATTTTCGAATGTATGTATAATGACATTGTATAGCTTTTCCAAGTATTGATTTATCAGCACTTTTTGGG # Right flank : CACCTTTGTAAAAATTCTTCAATTACTTGAGCTTTTTCGTTTGGTTTGTATCGTACCTACAAGAACCAGTATGTTAGGGTCTGGATTTTTTTGTATATACCATTTTACTTTTTCTTTAACATTTGTTATAATATAAGGTAGAGAACATCTTTCTTTCCGATTATGGTAAAGTGAGATGTTTTTTTCGTGGAAATATTGATTTCACAAAGAAATGGAGGGATTTCTGATGAAGAAATACGCCATTGTGTATTGTGAACATCAATTTGGTTCCATGGATGGAAAAACAGCGAATGGGCTTGTGCGCGATTCAGGGCTGTATGAGATCGTTGCAGTCATTGATTCGACAAAAGCTGGTCAAGATGCCGGAGAGGTGCTTGATCAAAAGAAAAATGGCATTCCGATTTGTAAAAACCTTCAAGATGCAATAGCCTCCGCAAAAGAAAAACCGAACTACTTCATCTTAGGAATTGCTCCAGCGAACGCTTTTCTCAAAAAAGAAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 14092-13465 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUT010000048.1 Anoxybacillus flavithermus strain WS5285 48_16449_47.3378, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 14091 36 100.0 30 .................................... GTATCCGTCGTATTCTTCAACGGAACGAAA 14025 36 100.0 29 .................................... TGAAAATATCCGTCCAGCACCTGCAAAGA 13960 36 100.0 30 .................................... TTGTACATTATTGATACTTACCCATACAAG 13894 36 100.0 31 .................................... TTAAATTAACAAAGGTTATTGAATTAGGAAT 13827 36 100.0 30 .................................... TTAAAAACTTACACGATGGTGAGTACTCCA 13761 36 100.0 29 .................................... TAAAAGGAGTGATATAATGAATCTGTCCA 13696 36 100.0 29 .................................... TAAAAGGAGTGATATAATGAATCTGTCCA 13631 36 100.0 29 .................................... TCCGCTGGAGCAAATACAAAAAAGTATGG 13566 36 100.0 30 .................................... AATAGAGAAGATGAAGATAATCCGATAACT 13500 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 100.0 30 GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Left flank : TCTTACGTTTGGGACGATTGATGAAGCGATTCAAATGATCAACGATTACGAAAAGCCGCTTGCGCTTTATTTGTTTTCAGAAGATCGCGATGTGCAACAACAAGTATTACAACAAGTTCGTTTCGGCGGTGGTTGTATAAACGATACGGTTGTACACGTTGCCAATCCTCATTTGCCCTTCGGTGGTGTTGGACAAAGCGGCATCGGTACATACCATGGAAAAGCAAGCTTTGATGCATTTACTCATTACAAAAGCGTGCTCAAACAGACGACGAAATTTGATATCCCGTTGCGTTACCCAAACTTTCCACATGCGCTCAAATGGGTGCGGAAGTTATTGAGATGAAAAAAGGCTGATCCAAAGTACGGATTTGTATTATCCCCTACAGGTAGCCAACAAAAAAGTGGACATTTGTTATGGTGTTCTTAAGAGTCTACCTGGAAGGGGTTTTTATGACCAAATGTAAATTATCAATTTATCCTTGAATAAGACACCTAAG # Right flank : ACGTGCATCAAAAAGCCTGTAATATGAACGATTACAGGCTTTTTGATCGTTTTAAAAAAAACGTGAGAAGGGGAGAAGAGTTATCCTTCATCCGTTTTTTTAAAAAAGTGACAGTTGCGTTGTTGTAATTGTTTTTTCCTTGGTAGTAGGTTCTCCTAAGAGAAATTGCATTTTTGCATATTGTTTTTCCGTTACGATCATCGCCCGCACTGATCCTTTCGGTGGCAAGTTTCTTTTCAGCCTATTAAGATGTTTATCAGCAGATTCATGCCCATTGCAAATCCGACTATATACGGAAAACTGTAACATATCATATCCTTCGTTCAATAAAAATGTACGAAATTGTCTGTAGTGCCGTTTCTCCCGATTAGTGACGACAGGTAAGTCAAAAAACACAAGTAATCTCATAAACTTACTCATAGGTGTGTATTTGAATAGGAAGAAGTTCCGGCAATTTTAAAAACGAAGGTTTTTCGTTTCGACTAGCTGTTACGAAGCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATAGTTCCCCTGAGGTTATTGCTGTGGTATGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 1391-152 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUT010000061.1 Anoxybacillus flavithermus strain WS5285 61_12364_32.9332, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 1390 30 100.0 36 .............................. TTGAGCCTAGCGAAACAGATACAAACAAATGGCGCT 1324 30 100.0 37 .............................. AAAGTGACCACATGATAATGAATCGCCCCACGCTCCT 1257 30 100.0 39 .............................. ATGCAATAGATGACGTTGATAATGTCGGTGCGTACGTCA 1188 30 100.0 40 .............................. ATGACGCACATAACAGGGAGGTGAGGACATGAACAATTTG 1118 30 100.0 37 .............................. CAAATCAGACGAATGAACCAGTCATGCCCAACTTCAG 1051 30 100.0 39 .............................. TTTTATTCAACTTCATCAATGACAACGCGTTCTATGCTG 982 30 100.0 38 .............................. ATTTCTATAATTTTATAAAATTTCTTGATGTTCCGCCT 914 30 100.0 38 .............................. GGATTCATGATGTGCATGTGGGCGATTTTGAAGAGTTT 846 30 100.0 39 .............................. ACATAAAAATAGAGTTTAACCCTAGCAAACATGATTTCA 777 30 100.0 36 .............................. TCACTTGCACGCCACTGTCATATAGAGTTTTTCCAT 711 30 100.0 39 .............................. CACAAGGAAAACATCCTGCTAGAAAATCAGGTTCAGAGA 642 30 100.0 37 .............................. TGCGCAGAGTGGGGAACACGCTCGCAGATTCAGTGTT 575 30 100.0 34 .............................. CCTTTCGACTTGTACAGCATTTTGTCTGTTTTGA 511 30 100.0 35 .............................. TTGAGTGACAATGCGATTTTATTCATTCCCATACC 446 30 100.0 38 .............................. AAAGATTTCACGTGGCGGAAGAAGGAGAAAATAAAAAA 378 30 100.0 36 .............................. TCAAATACGATTATTTTCGTTTTGAACTTTGTTCCT 312 30 100.0 36 .............................. CAAGAGAATATATGTCAAAAGACTCGCCACAATCCT 246 30 100.0 35 .............................. CTGGACTTCCAACGACGGTGGCGACACCTGTTTTA 181 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================== ================== 19 30 100.0 37 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : GAAGCGATCGATGCAACAAAGCGCCCGCTCGTAATCGGAGGTGTATTCGTACTTATGCTTGCATCGATCATTTTCTCTCACCGCGCCAACACATATTTGCGCAAATTAGACAATGAACAGTAAATTCCCCTGTTTTCGTACAAAGAAAAAACATGTAAAATAAAAGAAAATGGGTAAAGGGGGAATAAACGATGATGTGGATGATTACAGGTCTAGTCATTACAGCTGTCATCGGTTTTGTTATTATCGCGGAAGTGAACGCCGAAGCATAAAACAGTCTCTAAACAGGAGACTGTTTTTAATAAAATTTATTTGTGATAAACTTCACAACTGTCGTCGACCTCCAATCGTGCAAAAACTTCGGGGGATCGACGACAGTTTATTTTATGCGAATTTTTTAGCTGTATCAACGGACATAGACTATTGACTGAATTTTCAAATGTATGTATAATGATGTTGTATAGCTTTTCCATGTGTTGATATATCAACGCTTTTTTGGG # Right flank : CTCTAAAGAATTGAATTGATATAATAACTGTAGATGAGCAATTTTCATAACAATAATTACCATGTAAAAAGAAACAAACAGGGTAACCCTTATGCCACATGGAGCTGTTTTTTCACGGTATCAATGGGAATATTTTGTTTCGCTGCACAGTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 10359-9992 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABJUT010000065.1 Anoxybacillus flavithermus strain WS5285 65_10503_28.5577, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 10358 30 100.0 37 .............................. TTAAAGAGTGTAAAATAAAGATGTAAGCATCAAAGAA 10291 30 100.0 39 .............................. TTGCTTGTGTGTTTTTACCTGCCCCATCCATTCCTTCGA 10222 30 100.0 39 .............................. AAATATTTCACCACAGCTTGTTCAGTGGAAAATTCATTT 10153 30 100.0 38 .............................. TTCACAAAAACTTTAGTCATAAATATTCTCCTACTTTC 10085 30 96.7 34 .............................T AATGGAATCACAATGTTGCCTCCTGCTAGATAAA 10021 30 80.0 0 A.......................A.CGTT | ========== ====== ====== ====== ============================== ======================================= ================== 6 30 96.1 38 GTTTGTATCGTACCTATGAGGAATTGAAAC # Left flank : TTTTCATGAGACATGAACCTCCTTGTGAATGGTTTGGTAGCACATCTATTCTAATCAAGGAATCGGGTTCATGTCTCCTTTTTTGTTTCGATGTAAATTTATGTTAGTGATTTTGCTCATCTACAGTAATAATTCTACTTGTAT # Right flank : TTTTGTATTGAAAAGCAGGGATGTTTATGCCCTGCTTTTATTTTTTTGTTACAACTTTCAGAAAAGTATTGCGCAAAAACTAGTTCGTTTGTATCATCAGTAATATGAGGATATTTTTTGAAAAGGTGGATAAGGGATGAAACTACTAACATTTCTCGGCGCGAATGACTATCGTGAAACAACGTATCGTTTTCGGGAGCGTGTGCATACGGCAAAGTTTTTTCTATCTGTCCTTATTCAAGAACTGCAACCAGGTGAAATATACGTATTTATGACAGATGGGGCACGAGAGAAAAACGAAGCACCGTTGCTTGACGAATTAAACCGATACGGCGTAGATGAAAAGAAAGTGCATGCTGTATGCATTCCCGATGGGCAAACAGAAGAAGATTTATGGAATATTTTTTCTGTTATTGCTGATCATGTGTATGAACATGATGAAATCGTCCTTGATATTACGCACGGATTTCGGACGTTGCCGCTCGTTGGAACAATTAGTT # Questionable array : NO Score: 9.06 # Score Detail : 1:0, 2:3, 3:3, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGTATCGTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.41 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //