Array 1 1693794-1694703 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013653.1 Paenibacillus sp. 32O-W chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1693794 32 100.0 35 ................................ TACGTCGCTCCCGTAGATATGCCCAACGTCCTCCG 1693861 32 100.0 36 ................................ AAAATTAGCGGGCGGACTGATGCACAGCTTACCCGC 1693929 32 100.0 35 ................................ TTTGAACGCCTTGATTACTGTTGCCACCATTTCAC 1693996 32 100.0 36 ................................ ACTGTCCACCCTCCCGCTTTTTTACGTACTGGTATG 1694064 32 100.0 34 ................................ GAAATCGAACCGATCAGCACCGACCCGCGATTTT 1694130 32 100.0 37 ................................ AGGCTGTTTCCTACCCGGGAAACGCCCGGATCAAAAA 1694199 32 100.0 35 ................................ AAAGATTGGATGAGCTTGGCCGAAAAAGCTGCGGG 1694266 32 100.0 35 ................................ GCTATAATCCGGCTCAAACTCCGGCACGTCTTGGT 1694333 32 100.0 35 ................................ CCATGCTCCGACACCAGCAATAATCTGCGTCGTCC 1694400 32 100.0 36 ................................ TGCGTCGTACCTCCCGACGAGGTTTGTACAACTTTT 1694468 32 96.9 37 ............A................... TGAACCTCGCGCAAAACCTCGGGCGAAACCGGAACAA 1694537 32 90.6 37 .........CGT.................... GTGAGGGAAATGAACGATTTTACTCCTGATGCGTCTC 1694606 32 93.8 34 A......T........................ AATCTCGGCTTTTGAAATCCCATAAAAACGTCCA 1694672 32 90.6 0 ............A.A...........A..... | ========== ====== ====== ====== ================================ ===================================== ================== 14 32 98.0 36 GTCGCTCCCTACGCGGGAGCGTGGATTGAAAC # Left flank : ACCCTTGCTGCTCAAGGGTTTTCACGCCATACTGTCGCCCCCCGTGCGGGAGCGTGGATTGAAACTACGATCGGCACTTGCCAGATGCGGAAGTCGTGGTGTCGCTCCCCGTACGGGGGAACGACCGATAAGTGGAACTGGTAGAAAGCGGTTTCGTAAAGAGTCGATCGCCTCCTAAATTGCAGAGAGTATGCTTTGGAGCATGTTGTTGCGGGCTCCGGATTCGTCGGTGTGAATTTGGTCCAGTATTGACGCTTCCGAGCTATTCGGGAAATGCGCAACTTCGAAATTATAGTCGAAATTTGTTTTCTGCGATAAATGAATATGTGATATATTTGGATGTATCTCAAGCCTCTACACGACCGAACCATTCTGGTGCGAATGTTGATTTTAAGATGATTCATTAAAAGTCAATCGTAGATTTATACGAAAATGGCATTGAATAATGCAAAATGCAGTATAATTGATGCCCTGTTGAGATTGATCGCCCCTTTTTTGCT # Right flank : CGCACGAGCCCGGCACCTATGAAACCTGTGAATCAAGAGCGGAAAATATTTCATGCAATCCTATTGACACTGATAATCATTATCAATAAAATGAGGATAAATCCATTAAATGATATTGATTATCATTGTTATTGGGAGGTTGTTAAATGTTTCGCAAAGTTTTGGCACATGGTTTATTGGCGTTGGCGGTGCTAGCAGCACCACTGGCAATAGGCAAGGAAGAAGCGTCGGCTGCAGCGGCTTCCAATACTGCTATTAAGGTAAAGCTGGACGGGAAGTCAGTATCACTGGATACACAGCCTCGTATTGTGAAAAATCGGACGCTGGTTCCTTACAACAATATTGTGCATGCATTGGGGGGCAAGGCTTCCTGGAATGCCAAGAGCAAGACAGTGACTGCTGAGCGGGATGGAGTAACCGTTAAGCTGTCAGTCGGCTCATCTGTCGCTTACATAAATGGCGAGAAACTGGATATGGGAGTAGCCCCGCTCTTCGTGAAC # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCACGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.30,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1699661-1700583 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013653.1 Paenibacillus sp. 32O-W chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 1699661 32 100.0 36 ................................ ACAAACACTACATTAACATCCGATTTCTTAGTTATG 1699729 32 100.0 36 ................................ GCCTTTGTCGTGGACAAACGTGCGCTCGATGATCTG 1699797 32 100.0 38 ................................ CGCTATAAGTCTTTGTTGTCCGCGCGTGATTTTATTAA 1699867 32 100.0 37 ................................ AAAATACGCATTGTGGGATTACCTCCTATAGAATTAA 1699936 32 100.0 36 ................................ CACATCTGAGAACTATGGTCGGCCGAGCGCTTATTC 1700004 32 100.0 37 ................................ AAAAGAAGGTGCCGTCACACATGACGCTTGACATCTC 1700073 32 100.0 37 ................................ GAGCAGTGTGCGAATCGTGTTTTGCAATGCGACGATT 1700142 32 100.0 36 ................................ CTCGACAAATTCTTCAAACTCCATTCCTACTCGAAA 1700210 32 96.9 36 ....A........................... TCAACCTCAAGTTCAATAAATCGCGTATGTCTAGGC 1700278 32 100.0 37 ................................ TGGCCGCGGTCTCGGTCCGTATACTTGTTGATCCGCC 1700347 32 100.0 35 ................................ CCGGATGGATTGCCTAGCTATCTAGGCTTATCCGT 1700414 32 96.9 37 .......................A........ GGTTGACACCCTGACATATATCTCTATCAAATTGCTC 1700483 32 100.0 37 ................................ TTGTCTTCGGCAAATTTACCTTTTGCATGGATTGCAA 1700552 32 93.8 0 ........................C..C.... | ========== ====== ====== ====== ================================ ====================================== ================== 14 32 99.1 37 GTCGCTCCCTACGCGGGAGCGTGGATTGAAAC # Left flank : CCTGATTTTGACGTGAAAGGGATCGAATTCGGAAACGTGCTGGCTGCAAGATTTGGGGCGGTTCAGCCCATGGCTAAGCTGTTTCAGGAAGAGCAGATCGCTTTCTATATGAAAGATTGGATGTGCGCTTTGGAGCACGCCTTTGTGAGAACGTCGGATTGTCGAAGAGAATATAATGCTGTTTGGCGCTTTCGAGCTATCAGGAAATGGACAGCTTCGAAATTATTGTTGAATTTTGATTTCGGTGTCAGTTGATTATGTGATATATTGGGGGTATCACAGGCAACAACTTACTCTCGAAAATCCGTTCCTGAATGCAGGTGCGAATGTGAAGCTCACATAAAAACCCCGGGTCTTTCGCACCTCGAAATTTGTCGAAAACGAAGGGTTTTGAAACGATTCCTTAAAAGTCAAGCGTAAAACTATATGGACTTGGCATTAATTGCTACGAAATTAAGTGTTATTGATGCCATACTGAGATCGATCGGCCTATTTTTGCT # Right flank : CGCCTCGCTCCAATGCTTGAACCCCTTATTTTCGCCTTCAATCCCATACTTGTGCGTGGTTGTACACACGAATAGACGTATGGCTCGCTCATCGCCCTCCAAAGCAAAGGATATTCAACTTCCGTGTCGCCTGCCCTTCACTTTTTTCTCCGAAATTGTTCCAGGTACAATTCACGTCTTTGCATACTTTCTCACACTCATAATCAAATAGTCCCATTTTATAGTCGCAAATACCTAAAATAATGATGAAAATAATTCCATTTAAGTGTAAAATGAGATATATTAAGACGTCCTATCAGTCATTGAACTGCTATTTTATCGAGTAAAAGGTTGAGGTGATGGCATGACTAGGTCGAATGGAGTAGTTCCGCCCTGTCTCGATACTATCAACAAACGGCTTAGCGATACCAGCAACATTGCGAGCGAAGTCTTCGAAATTCAAACCGTCACCCCGATGATTGGAGGAAGCAGTACGCCCGGTAAAGTCAATGAGAAGGAGC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCACGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.30,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1708900-1709872 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013653.1 Paenibacillus sp. 32O-W chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 1708900 32 100.0 34 ................................ CCATATCCATTTGAGAGCAAACAGCACGATCAAT 1708966 32 100.0 34 ................................ ATATGCTCGGCATCCCTGCCCCGTCATCATTACG 1709032 32 100.0 33 ................................ ATGTCCAACAGCGATTTTCATGCGAAGATCAGA 1709097 32 100.0 36 ................................ TTCCGTTGTTGCCGTTTCTGCCGCCGGTACCTCCGG 1709165 32 100.0 37 ................................ ATTAAAAAATTCATTGAAACGTGGCTCGCCGATTATA 1709234 32 100.0 36 ................................ ATTCTGTCGGGATTTTAAGGCGGATAGCTCGTCTAA 1709302 32 100.0 34 ................................ CGTACACGGGATCCACAAAAACCTCACTGGCTGA 1709368 32 100.0 33 ................................ CTCGGACAGTGTGTTTGTGAATGCCGGGTCAAC 1709433 32 100.0 37 ................................ AGTATGAACAGTTCATCGACAATACGATCAAACCGAT 1709502 32 100.0 35 ................................ GATCGATCCAATCTACCAATTCCTTTAATGGTAAT 1709569 32 96.9 36 .........C...................... CACGGTTCGTCTATGCCTTCGGATTGCCACCGCTTC 1709637 32 100.0 35 ................................ CATGCTGCTAGACTCGTATGCCGTTTCAATCCGGG 1709704 32 100.0 38 ................................ AGCAATCCGATGCCGGTCGCGTAGCAGCGATTTAACGC 1709774 32 96.9 35 .........C...................... CGGTTCGGGACCGTGGATGAACCCACCTATACCTT 1709841 32 81.2 0 .........CC...............AAT.T. | ========== ====== ====== ====== ================================ ====================================== ================== 15 32 98.3 35 GTCGCTCCCTACGCGGGAGCGTGGATTGAAAC # Left flank : CAATTATCGTGTGTATGACTCTGCGGATGAAAAATCGAGGACGGAAATATCCGTGTTGTCTCTTACGTTCCTGTTGAATCAATTGCTTATGCTGCTCAATAATCCGATTCCGTTCCCTCACTTGGCGTATGCGAAAATGTTCAATGAAATATCTTCATCGATTTCCCGGAGAGGTTCGCGCCCCTCTTGATACATTCGGGACGCGAAGGCGTCATCGATACGAGCAACTCATTCATTTTACTTTTCTGCGATGATCGGGTATGTTGTAATATGGATGTATCGAACGCTGCCTTCTTGTGAAAAACCATTGTTTCCGGTTGGTGCGAATGTGAAGCTCCCATAAAATTCTCGGGTCCTTCGCACCTCGAAATTTGTCGAAAACAAAGGGTTTTGAGGCGGTTTAATAAAAGTCAAGCGTAAATCTATACGGAATTGGCATTAATTGCTACGAAATTAAGTGTTATTGATGCCATACTGAGATCGATCGACCTGTTTTTGCT # Right flank : CACGCTACCGCAAAACTCTTCAAATCGGCACAAATGAGCCGTTCCCCAGAATCATGCAACAAAACTACCTAACTGACTTGCCTTCCTCTCCAACTCCATCTATCATAGAAGCAACGTTGAAATGCTTGAAACGAGGGGAAACGGATGGAGCACCAAGGACCGGGACTGCCGGCGCAAGCGTTGCGCGGAATTCCGGAATTGAAGTATGTCAATGCGGACAATGTGGCGCGGTATCGCGCGATTATGCGTTTTTTCTATCAGGAATATAAGCGGCTGAAATACTGGCTTAAGCCGGAAGAAGTCTACGAAACGATGAAGGCCTGGAACATATGGCCGGACTATACGCCGGAGATGTGCCATCATGATCTCGAGCAACTGGTTGAATGGCAAAACTTGACCGCTCGCCACGATGGCGGGCGGTCTTCCACGTTGGAAGAATATTTGAAGAAAAAAATGCAATATTCCCTTCGTCCGTATTCGATCGAAATCGAGCGTTTGCT # Questionable array : NO Score: 9.17 # Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTACGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCACGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.30,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 1719288-1719785 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013653.1 Paenibacillus sp. 32O-W chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1719288 32 100.0 34 ................................ ACTGGCGTCTGCAATGGCGCAATACGGGCAGATC 1719354 32 100.0 36 ................................ ATAGCGTGACGGATCAGCATACCACCGCAATCCCTC 1719422 32 100.0 34 ................................ TTGCCCTACCTCGGGCATTACGCCCGTTCGTCCC 1719488 32 100.0 34 ................................ CGCGATTTCCTTAACGTCCTCGACATTGATCATC 1719554 32 100.0 37 ................................ GCATGATGAGCTGATCGACTCCTACGTACAGGAGATT 1719623 32 96.9 33 ......................C......... TTCCCGGGCGTTGAAACGTTCGTGACGGAGGAC 1719688 32 100.0 34 ................................ CGATTGGATGCCGACGGCGAAAACGTAGACATAT 1719754 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 8 32 99.6 35 GTCGCTCCCCATGCGGGAGCGTGGATTGAAAC # Left flank : AACGCAACCGGCTGAAACAAATGGGAGCCGTGTGGGATGACTCTCTTTGCAGAGCGATGAGCGGAATCGGACGAAAGCTGTTTCAGGAAGAGCAGATCGCTTTCTACATGGAAGATTGGATGTGCGCTTTGGAGCATGCCGTTGCGGGAGTTTCGGATTCTTCGAAGTAAGTATTATACCGTTTGGTGGTTCCGAGTTATTCAGGAAATGGGCGGCCTCGAAATTATTGTTGAATTTTGATTCCGGTGCAAGTTGGATATGTGATATATTGAATGTATCACAGGGAAAACTTACTATCGAAAATTTCGTCCCTGATGTAGGTGCGAATGTGAAGCTCCCATAAAAACCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAAACGAAGGTTTTTGAGACGATTCCTTAAAAGTCAAGCGTAAATTTATATAAAATTGGCATCGAAAATGGAAAAAAGCAGTGTAATTGATGTCTTATCGAGATGGATTGACCTCTTTTTGCT # Right flank : CTTCGAGGAGGGGAAATCTGCAAAAATATTTTATATACTCACGTGAGTATATAGCCAAGCACTTTTTATACTTGCGTGAGTATATTCTTTATGATACGCTAAATGCAACCGGAGGTATAACCACGATGGAACGTAAAGGTACGTCGGCCACCAGGGCCAAAAATAAATACAATGCTTCTAATTATGACCGCCTGTATCCATACGTCCCAAAAGGGCGGAAGAAAGAGTATGAGGCGGCAGCAAAAAAGGCAAATATGAGTCTTAATGAGTTTATTATTGAAGCGCTGGAAGAAAAGGTCGAGCGCGTCCAAAAGGGGGAAGAGGCGTGAAGGTTACACACCTAGATTATACAGTGGTCAATGACGTGATTTATCCGCTGCTGTTCGTCGATCAGGATTTGCTTGACTATTTCATCGAGGAGGACTTGGCTGGCCGTATTGAGCTTAAATTCATCCCGCGCCGACGTAAAAAATCCGTATTGTTGTAAATCTTAACGATGT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCATGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.80,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 1728861-1729094 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013653.1 Paenibacillus sp. 32O-W chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 1728861 32 100.0 36 ................................ GGAAAAATGGACCAAGAAGCGCGGGGCCGTTACGGC 1728929 32 100.0 37 ................................ GTTATTCCAGCGCGGCTAATTGCGCTTCGAGTTCGGC 1728998 32 96.9 33 .............................T.. TCCGCCACCAGCGCATCTAGTTCCCGACCCGGC 1729063 32 96.9 0 .......................C........ | ========== ====== ====== ====== ================================ ===================================== ================== 4 32 98.4 36 GTCGCTCCCCATGCGGGAGCGTGGATTGAAAC # Left flank : TGGAAGTAGGTGAAGGCTTGCTGGTATTGATTACTTACGATGTAAGTACGACAAGCGCGGAAGGCAGAAGAAGGCTGACTCGAGTAGCGAAGAAATGTCTCAATTACGGCCAACGGGTTCAAAATTCTGTGTTTGAATGCATTCTTGATCCAACGCAATTCCGGCGGTTAAAATATGAACTCGAAGCATTGATTGATAAAGAAAAGGATAGTTTGCGCTTTTATAATTTGGGGGAGAATTACAAGGCCAAGGTGGAGCATATTGGCGCCAAAAGTTCATACGACATGGAAAGTCCATTAATTCTATAGTCAGAAAACAAGGTGCGAATGTGAAGCTCCCATAAAATCCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAAATCATAGAAAATCTAATGATTTGGAAAAAGTCAATAGATTATTCATATGAAATAAGCATTAATTCTTGAGAAATTGCATTAAATTGATGCTTCATATGGATGGATTTAGTCATTTTTGCT # Right flank : CTTTACCTGGTTGTCGATGTCCATTTTCTTCTTGCTAGCTCGCCATGGAAACTGCAGAATATGCATAAGCAGAGCGTCCTACAATTGAACTTAACTTCGTATCATGCAAACTGTGGAAAGTCTATTCCATGAACAACAAAAACCCGAGAGAGGTCACTTTGAAAGGGGCTCTCACTCGGGTTTTTGGCAGCATTTATCCATACTATTAACGGAGGTTCAAATCCTTACGGTTTGGTTTCCGTAAATTCGGGATAAAATCTACGATATAAATATCTGACTGTCGTAAATCATAATACTGTCCCTGAACTACGACCAATGGATTGATAAGGTCGTCAGGATGAAGCATTGTTATCCGCGCAATTTGACCATTTGACAAGAGAACCGAATTCCCAATCATTCTGTTCATTACGTTGGAAATAAAAGATTGAACAACCAATGGATCAAATAACCCAGATGCACGTTGATAAATTTCCCGATACACTTGATACAATGGAGCAGGT # Questionable array : NO Score: 8.78 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCCATGCGGGAGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCGTGCGGGAGCGTGGATCGAAAC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-13.00,-14.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 6 5244097-5242956 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013653.1 Paenibacillus sp. 32O-W chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 5244096 36 97.2 40 ...................A................ AGGACGGTCCGGCCTGGTGATCCTGATACGTTCACTCGGG 5244020 36 100.0 36 .................................... CAGCCGGGGTGGGAACTAGATGCATTGGTGGCTGAA 5243948 36 100.0 36 .................................... TCGGCGGGCGGCGGATAGGAAGCTCCCGGTACGAAT 5243876 36 100.0 36 .................................... TTCAACCGTAACGCCGCGTTCGGTCGCACCGCATTT 5243804 36 100.0 38 .................................... TCAGATGCATTTCGGTTTCTTGACGGAATGAGTCTCGG 5243730 36 100.0 39 .................................... TCTGACCGTATTTATTACCGCACATACGTCGATACCATC 5243655 36 100.0 36 .................................... TCGTTACGTTCGAACGCAAATCGCGCGCCCGGCATA 5243583 36 100.0 37 .................................... TAGGGATAGCGTGAGGTAACGTTGTGGATACGTGTGA 5243510 36 100.0 37 .................................... TTATCGGTGTTACTGACATCAACCTCAATACACCCGT 5243437 36 100.0 37 .................................... CCAACGTCCCAACAAATCCTTGACGATGTGAATCTTC 5243364 36 100.0 38 .................................... TTGGCGACTTCATCATAGAGCTGGTCCTTGATCTGCTC 5243290 36 100.0 40 .................................... CAAGCATCAACAGGGACATTTCCACTTTCAATCGTGGACA 5243214 36 100.0 41 .................................... GCGCAAGCACCGAGTGCCGACGGTAAAGGCCGCCTTCTCGA 5243137 36 97.2 38 .......T............................ AACTTCGCGCCGGGCGATACGTTCGGCTGAGGTTAGTA 5243063 36 97.2 36 .......T............................ TGCAAAAGAAAACTGACGGAACGGTGAACATCCTGG 5242991 36 94.4 0 .......T..............G............. | ========== ====== ====== ====== ==================================== ========================================= ================== 16 36 99.1 38 CTGTTTAATGCTGTGACGCCGCAAGGCGTTGAGCAC # Left flank : CGCAGATGGCGTCAATGCTATAAGCTCTTGCATGGTTATGGCGAGCGAATCCAATATTCGATATTCAAATGCAGATTAACCGAGAAACAGTTGGCAGAATTGCGATGGAAGCTCGTTAAAGTACTTAACAGGGATGAGGACCGGCTGCTTATTACGCCTATTCACCCTGATGATTTGTCGCGTATTTTTCTTCTGAACATGCCGGACATAACGGAAGATTCCCAGGACTCCTTTGTTTTGGTATAGGCGTGTATTCAAGTATCATCCTCGTTAGAATGCCGCTTTGGGATACGGGGAGCGTTAGCCCAACAGTGGCAAGCTCTCGACCCGTCTGCAGATGAACGGAGATGCTTGAATGGCTACAAAGCCTTATGTTATAGGGAATGTCGCGAAATTATGGGGGGAATAGCTATGTAATGACACGGCTAAATCAAAATTCTCAATCCTGCTTGAAAAAGTTGTCTGTGGCCTCTTGTGGGAGTAAGATTATAGGAGATGCC # Right flank : TGCTTACTGACCTGGAAGGGGCGGGCTACACCGCGTCTGTTTATTGCTGTAACGGCCTTCGATGGCAATATGCGGCCGCCCTTCAAGTGCTTTTCCTTTCCTAACCCTCAGCACCTTCTGTCAAACCGTCACCGGTTTACCGGTGTGCCCCGCCATCCGTCAAATTGTCCAACGCCCCGTCTCCCGCCGTTTACCCGCCCCCTACCTTCAGCGTCTCCGTCTCTGGGCAGATTGCTTAGGCGAAAGTTGCAAAAGTGCAGGAATTTTGGTCCAAAAAAATAAATATAGCGCAAAATTCTGCAAAAATACAGTATTTTTTGGGAATTATCGCTTGGCTGGGCTTGAACGGGTCAAAAAATTGTATAATTGCAGCAATTTTGACATTTTCGTTACTTTACGCCCGAAAATATTGCATTTTCGCAACTTTGTCCTCGCAGCCGGTTCTTCGATCTAAAGAGACGGGGGAGACGGAATGGCGGGGAGGGGCAAGCTCAAGCCGC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTTAATGCTGTGACGCCGCAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.30,-9.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //