Array 1 258380-259263 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPF010000003.1 Mediterraneibacter sp. NSJ-55 DNA.506_ctg0003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 258380 30 100.0 35 .............................. TTTTTCTTTCGCCTAACCTGTTTAAAACACCAAAA 258445 30 100.0 36 .............................. GAAAAATACTTCCTATCGAGGGAGCAGATGGAGAAA 258511 30 100.0 36 .............................. ACGAAAACACCGGCCTCACCCCGTCGGAGCTCATGG 258577 30 100.0 36 .............................. GCTTTCAACGCGGAAGCTGGCTACCTGCAAAAGAAA 258643 30 100.0 36 .............................. AAACGTTAATTTTTCAGAATCTGCCGGACTTTTTGA 258709 30 100.0 36 .............................. AGAGCTTCTGCCATTTTATAGAAACTATCATATCTC 258775 30 100.0 37 .............................. TTCTGTAACGGATTGAGGAAGATGATAATCTTCACAT 258842 30 100.0 35 .............................. TAACTTGATACATCTTTTAACGAGTTCTTCTGCAA 258907 30 100.0 35 .............................. TAGGATTATGCTCGGCGTTACTTTCAGGGAGGACA 258972 30 100.0 36 .............................. GACGAACGGAAGCCTCCGGAATCTACTCCGGCTATC 259038 30 100.0 36 .............................. TCGTACCGTTCGCAGAGAGAGTTCTTTGAAAATGAG 259104 30 100.0 36 .............................. TAGACAAACAGTAACATAAAAGTTGATATAAATCAA 259170 30 96.7 35 .............................T TTGCATACATAGTAGGCAACTATGCTAGCCATGAC 259235 29 86.7 0 ......................C..-..CT | ========== ====== ====== ====== ============================== ===================================== ================== 14 30 98.8 36 GTAGAAATAGCGACAAAGTGGAATGTAAAG # Left flank : ATTGAAAAAGTGGATATTGTCAATGTCCATATGGAAGAGGGAACAATAGCCAGAAGAAACATGTATATTCCTGTGGACATGAAAACTTCCTGGGGTGAAAATTTGATCGGAGAAAGACATACTACGGTTTATAATTTGACAAAGGAATTTGAGATTACAAAAGAAGGCTTGAGAAGATGGAAAAAAGAAAATGGGAGAGTACGTGCTTATTATTATCCTATGGGAAACGTATTGAATGAATCTTATGTAGATGATATAGAAGAAGATGCCGCAATAATATTTGCATAGAGGAAAATATGTAAAGTGATGTTATTGTACACCGAAGAAAATGTTCTGTCGATGTGTAGTAATGTAAAAAGGTGGGGAGGTCGACAATACTGCAAAGACAAAGGAGATAAGCAAAATTAAAAGAAATTAGGAATAGGAACTTTGTAGTAAGTAAAGAGGTTGACAAAAAGAGGTATAAAAAAGGCAGAAGAAAGAGGCGGATTTGGGGACGG # Right flank : TAAACGTATTAAAAGAAAATTTATCTGATTAAGGAGAAGAGGTATGGAAGTTTATGCGAAATCTAAAAATAAGATGTTGATAGGTAAAGAGAAGAAACAGTTAGAACAAGATATATCTAACATTTTAGAAGAATTGGATATGAACTTGGACACTAAGGAAAAAGAGGCAATAGAGAAAGAGATGACTGAAATTTTGGAAGGAAAACCAGAGTATCAAAAAACACTAGTTGAACATGAGAATGATATAGTTAAATGTGCAGAAACGTTTTTTAAACAATTTGATATATATTTTACGGAGAAAGAAAAAAGATTAGTAATTGAAGCCTGCAGAATACATGATAGAGGGAAAGTTAATTTATTATTTCAAGCACTAGTAAATCCAGAAATAATAGAGAAAGGGATGATAGAGAAAGGCAGAAAAAGCAGGCAGATCCCACATGGATTTTTAAGCGCAGTTTCTATTTCAAAGGGGGAGTTTTTGAGCCTTTCGGAGTTGTTTG # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAATAGCGACAAAGTGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 263686-264174 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOPF010000003.1 Mediterraneibacter sp. NSJ-55 DNA.506_ctg0003, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 263686 29 100.0 36 ............................. TTTCTAAGCATTAAATCTAACATACCCTTTAACTGC 263751 29 100.0 36 ............................. TGTTGTTCAGCGATCCAAGTCTTTTTAATTCCTTTG 263816 29 100.0 36 ............................. TGCGGTAACAAGTCTTTTATTCAAATTTTCATATCA 263881 29 100.0 38 ............................. TACTTTCAAACGTTTAGAGAAATTTTGTTGACTCATCC 263948 29 100.0 37 ............................. TCTTATTCCTTCAAAGTCCCTTTCATATCCGATTACA 264014 29 100.0 37 ............................. GGAAACTTATAGCGAAGAACGGGTATCAAAGGATATA 264080 29 100.0 37 ............................. GATTTTCTTCTAAATAGCTGACCGACATTGTATTAAA 264146 29 82.8 0 A........C.C.........TT...... | ========== ====== ====== ====== ============================= ====================================== ================== 8 29 97.8 37 GTTTAAGAGTCGCAAAAGTGGAATGTAAA # Left flank : ATGATGGATTCAAAATATGGTGGTAGAATATGTATGTAGTATTAGTATATGATATAAGTCAAGAAGAAAAAGGACAGAAGCGTTGGTCACGTGTATTTAAGATTTGTAAAAAATATTTGTCTCATATACAAAATTCAGTGTTTGAGGGAGAAATTTCAAAAGCACAGTTAGTAAAACTTCAGCAGGAACTAAGACAATTCATAGATAAAAATCTTGATTCAGTTATTATATTTAAAAGTCGAAATGAAAAATGGCTGGATAAAGAATTTTGGGGAAAAGTTGAGGACAAAACGGGGTTCTTTTTATAAGAGCTTTGTAATTACTAAAATTAGAATTGTCGATGTCTGATAGTGTCAAATTTGCAGTAGGTCGACAATGCGATAAAATAAAGCAAAATACTAAAAAAGGTTAGCTTGGGAAAATCAAAAAGTAGTTATTGAGTAGAGGTCGACAAAAAGGATATAATAAACGTGAATAAAATGTAGATATTTTTTGTACGG # Right flank : AGTACAAATTTCAGTAAGGTTCTCCGTTTTTATTTTTTATATTAATAGTCCTAATAGTGCACAAGGTGAATTTTTAAGGCACAACAACATCACAGAAATATGGTATTTCTGCATTTATGTAATTTAAACTCCACTTTTACAGTGAATAGTTCGGAAAAATGTTCTTATTGATGAAGGCATTTTTCTAATTTCTTTCTGTTATAAATTGTATCCCCAGGTTATTTATGCTACAGTAATAAGCAGACTATTATCGTACAGTTTATTTTAGCAGAAATTATACCTTGTCAGGCGAAGCCTGCCCTCCCAAAGAGAATGTATTACGGTATGCCCTTTAGGGTATGCCTTGTCAGATAGAGTCTGCCATTCTGAAGGGGATAAATAAGGTGGCTTTTAGAGTATAAAATTTAGGAGAGGACAATGGAGATTTTTGTAGATGCGGATGCATGTCCGGTAATCAAAATTGTAGAAAAGGTAGCGAAGGAATACAATCTTCCAGTCAC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAGAGTCGCAAAAGTGGAATGTAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //