Array 1 1-203 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFSB010000371.1 Bifidobacterium sp. M0353 NODE_452_length_203_cov_20.084746, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1 27 86.2 32 --........................T.G TTAGAGAGTATCGCGTTTAGGGTGACCGGAGG 60 29 100.0 32 ............................. CTGCACTGCCGATGCTGTGTAGGCTGGGCCGG 121 29 93.1 32 ..........................CG. ACAACCAGATTAAATTACTGGGCTTGTGCAGG 182 22 75.9 0 ......................------- | ========== ====== ====== ====== ============================= ================================ ================== 4 29 88.8 32 ATCATCCCCGCGGATGCGGGGAACACATC # Left flank : | # Right flank : | # Questionable array : NO Score: 4.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.44, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCATCCCCGCGGATGCGGGGAACACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTCCCCCGCGGATGCGGGGATGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.40,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 635373-643580 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFSB010000002.1 Bifidobacterium sp. M0353 NODE_2_length_667288_cov_12.080617, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 635373 29 96.6 32 ............................T TTTGTCTCGGCACTCGCGGAAGCCTCGGAAGA 635434 29 96.6 32 ............................T ACAGATACCACCGGATTCGACACTATCGTTAA 635495 29 96.6 32 ............................G GTGTGCGGCACCGTCCAGCCGGTCACTGCTCC 635556 29 96.6 32 ............................G CGTGGCCATCTCCTGCATCTCCTCGGCGGTCG 635617 29 96.6 32 ............................T GATTCACGTGAAACATCGGTCCGGTCCTCAAA 635678 29 100.0 32 ............................. GCCCTGTCCAAGCAGGACGGGCTGGACATCGG 635739 29 100.0 32 ............................. CAACCTGCAGGCCGTCTACGACACCAGCAGGA 635800 29 96.6 32 ............................G TAGTGGACTTGGTAGTTTCCTCAAAATATTTA 635861 29 96.6 32 ............................T GAGCGGCTTACCGAACGCGCTTCCCTCACCGG 635922 29 96.6 32 ............................G TCCATCCAGAGCATGGCTGACCATCTGTCCGG 635983 29 96.6 32 ............................T CCCCGGTAACGAGTTCGCTCTGACCCGTCAAG 636044 29 100.0 32 ............................. CGATGATGGCTATGTCGTCGGCTGCCAGGCTG 636105 29 96.6 32 ............................T GGCAGGCCAAAGGGGACCCGATCCCCGTGGTC 636166 29 96.6 32 ............................G TGGACATGATGGCGTGGCGGTCGGTGGTCAAT 636227 29 100.0 32 ............................. AGCATTACTAGGTTTTCTGAGTTCCATCATCA 636288 29 96.6 32 ............................T CGCACAGACCGGGCCGCTGCCAGCAGACCCGG 636349 29 96.6 32 ............................T CGTTCCGTTGTTCGCGCCACCGGGCAGAATGT 636410 29 100.0 32 ............................. TGGTTAGCCATGGCTTCCGCGGTGGTCGCCTG 636471 29 96.6 32 ............................G GCGCTTGCATATTTGGGGTATTGGCGTGCCAT 636532 29 100.0 32 ............................. AAGTCCACCTATGTCGACCGTTTCGACGTGGT 636593 29 100.0 32 ............................. CTGAACGCCTTTCTGCGGGTCTTTCGTGAATG 636654 29 96.6 32 ............................T TATCGGCCACATCATAGGTAGTCAGTAATTCC 636715 29 96.6 32 ............................T ACTTCGATGGCATCCTTGTAGCTGGGCCAGCC 636776 29 96.6 32 ............................T ACGGCTTCTAATCAATCGTTGCCCCGGCCATC 636837 29 100.0 32 ............................. GACCATGAAAACACGCGACATAGTGGACATCA 636898 29 96.6 32 ............................T GACCCCTTTTCCGTGACCACCTTGGGGTACTG 636959 29 100.0 32 ............................. CTACGCCAACGCACAGCAGGCCGAACGCATAT 637020 29 100.0 32 ............................. ACCCCAGGCTTACCGTATATGGCTTCGTTGAT 637081 29 100.0 32 ............................. AAATCGATATCTGCTCAATTCCAGTGTCAAAA 637142 29 100.0 32 ............................. TTTCACCGGCCTGCGACAAGGCAGCTCAATGC 637203 29 96.6 32 ............................T AGGTATCTGTGATCCGGTCGCGGATGGTTTTG 637264 29 100.0 32 ............................. GCCGAGGCGCTGAGCCTCCTCAACCGAGCCGA 637325 29 100.0 32 ............................. TACAACCCGCACATGCTTGCCCTCGAACTCGT 637386 29 96.6 32 ............................T AGGAGTCTGCTCGTTAGGGTGCGCATCTCCCT 637447 29 100.0 32 ............................. CTGAGCGCCATCTTCGCAGGCACCGAGGTCGA 637508 29 100.0 32 ............................. CTGAAAGAAACCACCCACAAAAGCAGGAAAAA 637569 29 100.0 32 ............................. ATCATGTGCATAGCACATACATGTAGTTTTAC 637630 29 100.0 32 ............................. CTGGTCGTCACTCATGCTGTTCAGCTTGGCCA 637691 29 96.6 32 ............................G CGGCAGACCGTATCGAAAGGGCGCTTCAGGAC 637752 29 96.6 32 ............................A CGTTTTTGATCCCGTTGGTGTACACGGTGTCG 637813 29 100.0 32 ............................. GGTCGGTCTGCACTCGGGCGGTTTTCTGGGTT 637874 29 100.0 32 ............................. AGGAGGACAGCCATGATAGATGAACGCCGCTT 637935 29 100.0 32 ............................. TTCGCCACCATCATCGACCACACCGCCGGAAG 637996 29 100.0 32 ............................. CGGTGTCGCTCGGGGGGTCGACCATCGGGAAA 638057 29 100.0 32 ............................. CCACCTGCTTGAGGGCCTTAGAAGCTTCGTCC 638118 29 96.6 32 ............................T TCAGCGACCTCCCAGCTTGACATGCCCGGATG 638179 29 93.1 32 ..............T.............T CGTATCTGCCGGAACTCGCCGTGTTTCATTTT 638240 29 100.0 32 ............................. AGTTCCGTACACGCTGTTTTCCTTGGTTACAT 638301 29 96.6 32 ............................T TCATCACCGCGATTGCGAGACCCAATCACAAT 638362 29 100.0 32 ............................. ACGGCGAGCGTGCCTGGCGATTTCGTCGTGGT 638423 29 96.6 32 ............................T ACTTTCAGCATGAGCGGTCAGGACATCAATGG 638484 29 96.6 32 ............................T GACGGGTATGGCACCGATCAGAGCCTGGATTA 638545 29 96.6 32 ............................G TCACGCCACACCGTCCTTAGTGCCAACAACCC 638606 29 96.6 32 ............................G TCCGGCGGCGACGAGCTCGTCAGCCTGTTTTT 638667 29 100.0 32 ............................. CACTACGAAAACAAATACTGGGATCTGTTCGA 638728 29 100.0 33 ............................. GATTCAACCGTCTCCTGCATTCCGCAAGAACAG 638790 29 96.6 32 ............................T TCCATCCGATCCGATGCGACCCGGGCGTCACA 638851 29 100.0 32 ............................. TTGAGTGAATCACGGAATTCCACCCTCTTGTT 638912 29 100.0 32 ............................. TGCACGTACTTGTACAGGCGGGCGGAATCGTC 638973 29 96.6 32 ............................G CATGAACACAGCAGCACAGGACACAGGACAGT 639034 29 96.6 32 ............................T CACGGCTGGTGGGTGATGAGCGAGGACAGACG 639095 29 100.0 32 ............................. CCATACGGTTTAATCTTCCGGAACAGGGACGG 639156 29 96.6 32 ............................G CCCGTGAGTGCTCTCGGCTGTACTGCCGAAAA 639217 29 100.0 32 ............................. TCGTCGCCGTTGACTATGCCCTTGCCGAGAGC 639278 29 100.0 32 ............................. CGTTTGTCCGCGGCACTCACCTATGCGCAGCG 639339 29 100.0 32 ............................. AAGCTGTCTCCCAATGACACTGAGCTCACATT 639400 29 100.0 32 ............................. ACGCCGCTCACATCCGGAGCGGCCGGCATCTT 639461 29 96.6 32 ............................A CAGACCGACCCTAAGATCGGTGCTCGCATGTG 639522 29 100.0 32 ............................. TGGCACCGAACACCACGACGCTGACCCTGGAA 639583 29 96.6 32 ............................T TGTGTTCCGGGTCCGCGTCGATGTCGTACACG 639644 29 100.0 32 ............................. ATGTCTCTGTTGCCGATTGAGATTGTCCTCTT 639705 29 96.6 32 ............................G TGTTTGAATGCTATTCGGTCTATTACTGCGAC 639766 29 96.6 32 ............................T CCGGTCACCCTAAACGCGATACTCTCTAACAA 639827 29 96.6 32 ............................T GCACAAGCCCAGTAATTTAATCTGGTTGTGCG 639888 29 96.6 32 ............................T GGTCATGGCTTGTCTGTCGAGTCTTGGATCAG 639949 29 100.0 32 ............................. CCTGCGGCCGACTGCCAGCTGGCCGCGAACCG 640010 29 96.6 32 ...........G................. GGGATTATTTCAGCACTTGGCAGTTCCCCCTG 640071 29 96.6 32 ............................G CCGAAATCGGAGATGCTCAGGTCCCAGGAGAA 640132 29 96.6 32 ............................T TGGAATTTGTCCCAGACTGTCAAGAGCAGCGG 640193 29 100.0 32 ............................. TTTACGGCCCCACCATGGACCTCTACAGCACA 640254 29 100.0 32 ............................. AGATAAGCGCGAATCCAAGAATCAGTGCCATC 640315 29 100.0 32 ............................. CAGCACGGGTGCCATACCTATCCACCAAGTCG 640376 29 100.0 32 ............................. ACCATACCCGCTGTTTGTAAGCCTCGCACGCT 640437 29 100.0 32 ............................. AGGCCAGCATGAGTATGATGCCGGACGAGGAC 640498 29 100.0 32 ............................. GCGCCGAGCGTGAGGCCCCCAGCGAGGAAACT 640559 29 100.0 36 ............................. AATATCCGTCCACCCTATACGATCCATCCCCGGCAG 640624 29 100.0 32 ............................. GCCATCCGCAGCGGCAAGGTGCCCAACGTCCA 640685 29 96.6 32 ............................A CAATCCAAAAAAACGTACAAAAAGAGATTAAA 640746 29 93.1 32 .......T....................G CGTGATGAGATTATTAAGGGGTTTGACGCTGT 640807 29 100.0 32 ............................. GGGTTGACGCCGATGGCCTCCCTATGCACCAG 640868 29 96.6 32 ............................T CTCACAGCCCTTACCGTCAGCATTGAGTCTTA 640929 29 96.6 32 ............................T CTACAACCTCAACGCTCACCAACCGTGATCAG 640990 29 96.6 32 ............................G CTCTGATTCAGGCGGGTGGAGAGTTCGACCTA 641051 29 100.0 32 ............................. ATGCTCACCCAATCACACTTGGACATACTTGT 641112 29 100.0 32 ............................. TTCGTCTGGCGCGACGACGTGCTTTTCCACTA 641173 29 100.0 32 ............................. TTATTGACCTGTACAAACGTCATTGTCTTGGC 641234 29 96.6 32 ............................T CCTGTGCATGACGCCGTCGATGATCTCAATGT 641295 29 100.0 32 ............................. CGTAGCCTCGTGGTTCCTGCGCACCCTCGTTG 641356 29 96.6 32 ............................T GCTCTCGTGTATGGTGTCGAGCGAAGTATAGA 641417 29 100.0 32 ............................. AATCAATAAGGCTACATACTATAAGGATACTG 641478 29 100.0 32 ............................. TTGCCCGTCAAAGCCAAGAACCCTTTGGATGT 641539 29 100.0 32 ............................. CGACATTGCGGACACTGGCCTGCGTGCCCGGC 641600 29 100.0 32 ............................. CAGCCCTGACCCTTGTCGTCAAGGAACACCGT 641661 29 93.1 32 .....................G......T TCCGTATAACAAAGATCAAGTAAACGCACGGC 641722 29 100.0 32 ............................. CTCGGCAGGCGAACCCTTGAAACGAATCACAT 641783 29 93.1 32 ..............T.............T CGCGTGTATGGGCGTCCTCGTTTTGTGGGTAC 641844 29 100.0 32 ............................. GCTGTCACCCGCTACGGTGCGGGCACCAGCGA 641905 29 96.6 32 ............................T CACAGGAGCCGCCGGCGCTCGCTGAAGAGACG 641966 29 96.6 32 ............................T CCGCCGGAAGAAGATAATCCAGGATTCAACGA 642027 29 96.6 32 ............................T CATCCGGGCAGAAAGACAAATGGACATGCTGC 642088 29 96.6 32 ............................T GGTACGGAATTCAACTTCAAGGGCCTACACAA 642149 29 96.6 32 ............................G TGGCGGCCGGCCCACTTGCCCTGCGTATGCCG 642210 29 96.6 32 ............................G CACTATCCAAGTTGACCGTCGGATCACTATTC 642271 29 96.6 32 ............................T ATCCTCGAGTCAGCAAAACTCGCTATAGCAGC 642332 29 100.0 32 ............................. ACGAAACGCGGGGGAGGGCCGGAAGCGGACCC 642393 29 100.0 32 ............................. CCTACAAGGCTAAGGAGGGCGATAAGTGATGG 642454 29 96.6 32 ............................T GCCGCCCAGCATCCGCTTGATGTCGTCAGGGT 642515 29 96.6 32 ............................G GGTGTCACGTTTACGACGGAGGCGGCATGATG 642576 29 96.6 32 ............................G GGTCGGGGTCTGCGCGGCGGTAAGTGTGGCAC 642637 29 100.0 32 ............................. TTGGAACGGGAATACTACAGGCATCAGCGCAA 642698 29 96.6 32 ........T.................... ACGGGCAGGAACAGCATCCAGGCCCAGATGGA 642759 29 96.6 32 ............................G GCCCCGTCCCTGACCGCGTATCGGGATTGGAG 642820 29 93.1 32 .......................A....T GCAAGTTCATCCATGACGAGGATGTGGCTTCT 642881 29 100.0 32 ............................. CCATCAGCAGCGTCACATTCACCAACGTGGAT 642942 29 96.6 32 ............................T TCGGGTTCGTCATCGCCGTCTCCTCCCCATGG 643003 29 100.0 32 ............................. CGCTACGAAGAGGTCATGACCGTGGTCAACGA 643064 29 96.6 32 ............................G CTGGCCGGGGTTCAGGACGGGGTTGACATGCA 643125 29 100.0 32 ............................. GAGGCTCCCGAATCTCGGGCAGCCTGGGCGTT 643186 29 100.0 32 ............................. AGGTGGAGAAGAAACGCAAGAGGAACGCCGAA 643247 29 93.1 32 ......................C.....T CAGGTCCTGGATGGTGGCCTGCCTGGGGATGA 643308 29 100.0 32 ............................. CCGTTCAGCAGTGAATACTTCCGCAGCCTGTA 643369 29 100.0 32 ............................. GCTCCACTCATTTCTTGTCCTTTCACATCCAG 643430 29 100.0 32 ............................. CGTTGTCTCATGCTTACCCCGTGATTCTGGCC 643491 29 100.0 32 ............................. CTATACCGCCCGGACCACGGGCCACACGTAGA 643552 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ==================================== ================== 135 29 98.1 32 GTGTTCCCCGCATCCGCGGGGATGATCCC # Left flank : GCCACGTCACCGCTAGGGTCCGGGACCGGCTTTGGGAACGTATCACAGGGCAGATCCGAACTGGCAAGGCCATCATGGTCTATTCTGCCCGCAATGAGCAGCATCTGAGTTTCAAGGTGCATCGCTCAGATTGGAACCCGGTAGACTGTGAAGGATTGACTCTTATGGAGAGGCCTACGGATGGCGGCGATGGCAGATCTGCGGGTGGTGGAAACCGATACCGCCGAACTGGTTGGAGCAATGCAAGCAAGTACAGACGTGCGGCAAGGTTCCGGCGTTCGCGATCCAGCTGAGTCCAAGCAGTCTGCACTTTTAAGATGAGTTTTGCCGTTGCATGCTAAGTATCGATTACTGGGCCAGTGCATTGTGAAGAAGCTCAGTGTAGATGGTCTGAATTGCAGTAACTGAGACAGGGGATAGAGGAGGGATTCGAAATGCAAACTCATTAAAAATCGGAGATCTTGTCTATTGTATTGTTGGGATTGCAAGGATTTCTAAGT # Right flank : GCCTTCTGGAATGATCGTCTTCCGAAGGTGTAGTACATATCCAATATATGGACAGATATTGCCAAAGTGACAATTCTCTATCATAATTCGCTTATGCACAAATCGTGCATTTTGTTGCGACGGCAAAGGAACCGCCATGACACATATATCTTTGAAACAAAAGCTATTTACTGCAGTCGCCGTTCTGACTGTTCCCTTCATGTGTGTGAGCACGGCATCGGCATCACCCGTATCCTTTATGGACGAGACTGAAGCCATTGCGCAGAATGCTCTGCGCGGTGCTGATGCTGTGGGTATTGATACCGCAGCAGATATTAATTTCTCTTCCTCCTCCGGTGAGATAGTTGCCACATCCAAAGACGTAAGCGTCAAACTCGAAAAAGAGGGAAACACCGCTCAAGTCACAAGTCAATCTGGAGATACTTTAGTTTTGCCAGAGGAAGCATCTGGTAATGTCGGTGTATCGGACGGCACCGGAGTGGTTGCCGGCAAGAACATGA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.70, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATCCGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 645050-645699 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFSB010000002.1 Bifidobacterium sp. M0353 NODE_2_length_667288_cov_12.080617, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 645050 29 96.6 32 ............................T CAACTCGGGTGCCTACAAGAGGTACGCGGAAG 645111 29 96.6 32 ............................G TCGGCTACGCGCGAGTGAGCACGCTGGAGCAG 645172 29 96.6 32 ............................T GGGTAGGACTTGCATTCCTGCCTTTGCTGGGG 645233 29 96.6 32 ...T......................... TGGGTGCCTGGGACAATGAAAGCAACTTCACC 645294 29 100.0 32 ............................. CTCCCACGCGTTGAATGGCCCTTGCCTTTTGC 645355 29 96.6 32 ............................A CACCGATACGTCGCCAGCGCGTGGCTCGGTCG 645416 29 100.0 32 ............................. ATTTTTAAGCCTTCGCTTTCTGTTCATCTCTG 645477 29 100.0 32 ............................. GGGATCCTGGGCAAGATCTTCCACGTCAACAT 645538 29 100.0 32 ............................. TGGTTTTACGAGTCGCTGCCTATCTATCCCAT 645599 29 100.0 43 ............................. AAGCAGTGGACCGTGGCTTCTTAAGAGTATACAAATACTATCG 645671 29 86.2 0 ...T....T.........A.......T.. | ========== ====== ====== ====== ============================= =========================================== ================== 11 29 97.2 33 GTGCTCCCCGCATCCGCGGGGATGATCCC # Left flank : TTCTGATGTCCAATAAACCAATAGATATTGCTGTCAGCTTTTTCGGACTAGCGTTAGTCCTTGCCCATATTATATCGTTTGTTACTGATTCACAGTTCTGGGCTTTATGCACTTATCCAGTGGCTTGGGTGGCGATGATTATCTTTATGGCAATAGAACGCCGAGGGAAACACGATAAAGACTAGCGTCATTTGAAGATGCTGAAATGTGTGAGTTGGGCGAACTGCCACATGTTTTATAGTTCGCCCTGTTCGCTTTTCCTTATGTGCTCTAATTCGTGGCCAAAGCACTCCATATACAGTTCCTCTGGATATCCTAAACCGCTGTGCGATCTCGTTGACAGTGACGCTTTTGGACGCGTAGAGCTGTCGGACCATGGCCTCATCGCTCTTGCTGAGTTTGTGGCGCCGGCCACCAACCCTACCTCTCGACCGGGCAGCCTTCAGACCAGCATTTGTCCGTTCACGTATCAGGTCTCTCTCGAACTGAGCCATGGCCGC # Right flank : CACAGGCTATCGGATGGATGCCCTGCAGGTTCACAAATATGAGAGGAGACGAATGACTATGGATGAGGATTTCATGAGAAAAATGGCATCCAAGGATAAGGCCTGCACCACTACTCATGACCATATTCCTGATGACCGGATCAACAGTCACGCGTCATGCTATCCCATCACTGATGATATGGATGAAACCGAACGCCGGGTCTGGGATTTGCTGGATGACGAGGACAGGAAAATGATTCAGTCGGATCGTACATACTATGGGACAAACTATGGTGCTGGCTTCGGCGGCAATAGCAAGGTGAGTTTCTACGATGTGCTCGGCATCAGGCAGTTCGACTGATTCATCCCGGGCTTCCACATGTTGCTGCAATCATCAAAAGAATCACTATAGGAGCGCCGGGAAGAATCCATGACCGCTTCATAGTTCGAACATGAGTGTTTGATTCTCTTTAAGTCCCAGTAATCGCATTGGTGTGCCCTGATTGAAGGTTTTGTCTGCC # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCATCCGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //