Array 1 737131-737748 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB932356.1 Enterococcus faecalis EnGen0058 strain 2630V05 acsRX-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ==================================================================================== ================== 737131 36 100.0 30 .................................... TAGCAGGGTTTAAACCACTCTCATGTTCCA 737197 36 100.0 30 .................................... AACTGATTACCCACGTCTTTTACTTGTTTT 737263 36 100.0 30 .................................... GGACTGGTACAACTAGCAGAGAGATAGTAA 737329 36 100.0 30 .................................... ATGGTACAGAAAAAGCCTATAAAAAAGCTT 737395 36 100.0 30 .................................... GGTCTGTGCCATGATGGGAATAAGCGAACT 737461 36 77.8 84 ............................NNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 737581 36 77.8 30 NNNNNNNN............................ TCTCTAAGAAGCCGTTCTTTCTCGTGATTT 737647 36 100.0 30 .................................... CAAAAAGCGGTTAATGATTATGTGTTTCAA 737713 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ==================================================================================== ================== 9 36 95.1 37 GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Left flank : CTGAAGAAGCCAATTTGGCTGTTGCTTCAGATACAAATAATTATGCTAGAAAGATGACTATATTTAAACATTTAGTGGGGATGGCTTTTTTGAAAATTATTTGGGGTATAAAAGCGAGTTTGTACATCCAACCTACTTCCTTATTGTTTTACTGGTAAGAAATTATTGAGAGTACAAAAACCATGGACTGCAACAACTTACGACGACACGTGTTTTACTGATAAGAAATTATTGAGAGTACAAAAACTCAAGCCTTGGCTTAGGATTGCCATCTTTAGTTTTACTGATAAGAAATTATTGAGAGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATAAGAAATTATTGAGAGTACAAAAACCAACCAACCGATTGACGTCGTTCTAGGTGC # Right flank : CCTCAAATTTAAAATTTGAAATCTCATTAATAATCCTTTTGATAAAAAATATAACTTTACGCGGTTAAAATTCCAGACTCACTCTTTCCGCAATAACCGTTCGCGAAAATATTGTTCTTCCAATACAGTGAGCTTTTCCATCGACGTCTCGACACACTCACTATTGTCGTCTAACAATTCCTTCAACAATTTTAATAATATCATATCTTTAGGTAAAAGATAATTTTTTGTATACTGATCACCAACAAAATGACAGACTCGATAAAAAGCATCAATTAGTTGTTGATTTGTCCAAGAGAGTTGATCTGGATAATGTCGCTCAATACTTTGACGAAAAACATCAAAAACTGGCAACTGCTGATACTTATCATATAACAAAATCGTTTTCTCAACATCTTCCTCCGTATACGGTAAAGGCAAGCTTCTATTACTAAAAATAAAAAACTTCAACTGCTTTGTTTCTTGAGCCAATTTCTTTAGCTGCTGAAAGAGATAATAAA # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.75, 5:0, 6:0.25, 7:-0.50, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACTGATAAGAAATTATTGAGAGTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 2 1005261-1005092 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB932356.1 Enterococcus faecalis EnGen0058 strain 2630V05 acsRX-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 1005260 37 100.0 29 ..................................... GGAATTTTAGATTCCGATGCAGGACATCA 1005194 37 97.3 29 ....................................A CAGAAATATCAAACGCAAAAAAAGGTTTC 1005128 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 3 37 99.1 30 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACG # Left flank : TGTATATCCTCATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAGGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTTGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAAAAAGTTTGGTATAATAAACGTGAAGAAAAAAATTAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGACTACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : TTAAATTTTACATCAACAAGCCAACCGTTGTTTTAGAGTCATGTTGTTTAGAATGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCATGTTGTTTAGAATGGTACCAAAACGACTTACAAAAGACTGTGATTTACGTTATAGTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACAAACTTTTTTGATTTGGCTTTTTCTCCCCTGTTTTAGAGCCATGTTGTTAAAAAACAAACTATCACCTCAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCAATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAACGGGAAGAAATCTTGGTAGCA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //