Array 1 358144-358707 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029544.1 Lactobacillus helsingborgensis strain ESL0183 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 358144 36 97.2 30 .........A.......................... ATGGCAACATTGTTAATAATCCGGAAGCAG 358210 36 100.0 30 .................................... TTTACCACTTTAGCTTCCGTAATCGCATTA 358276 36 100.0 30 .................................... TGATTTGGAAAAAGCAGATGTCTGGTTTAT 358342 36 97.2 30 ...........................A........ TCTTCAAATGGCTCTTTGGCATCAACTACT 358408 36 100.0 30 .................................... GAGTAACTATAATCATCGTCATTATCGTTA 358474 36 100.0 30 .................................... CCTCGCCACACATTAGCGCCCCAGCGATTG 358540 36 100.0 30 .................................... CTTTAGAAAATGGCGAAATTGTCTTTACGA 358606 36 100.0 30 .................................... CCCCGTCGCTCGCCGCTAGGCAGGTCAAAC 358672 36 97.2 0 .............................A...... | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 99.1 30 GTTTTAGATGGTTGTTAAATTGATGATGATTAGAAC # Left flank : ATCCGCTACTTAGTGGCGATATTACTAAAAAGTATATGACACATATTGTAAGTAGTTATATTACAAACTTGGATGAGGAAAATCGCAATAAGATTATTAAATCTTTTTATAATTTAGAAACTACTTTGCATGATACGTTATTACTTGAAGACTTACCTTTAGAAATTACTTTTGATGAAGACCTGAAAAAGTTACTTAAACTAACTGATGTTCATTTGGACAAAACTATTTTAAATAGTCCGTATGGTATAATAGAAACAGTTTTAAGAATTCACCAAGTTTGTAATTTGAGGACGATCCCCGTTATTTGTAATGTAGCTCATTACATAGAAGAACGGGAGTGGCAAGAATTAGCTAGTCTTGTTACTCAAATGAAATTGATTGTGATTTTAATCGAATTTACTGATGCTAAAAATTTGCAGATACCTAAAGACATACCTTTTTATTATATTGATAAGGATCTAGTTGATTGGTATTAACTATATTATTAAATTTAGATT # Right flank : CGCCAACGGCTGCGCCCAAAGGGCCGCCAAAGTTTTAGATAGTTGTTAGATCAATACTCCTTTAATAATTTAAAATAAGTACCCTAAAATAAAGAAAGGTTTTTGTTTGTTTACATGAAAAATATACTAAAAAGTAACAACAACAAACTATACCTTTTGTCAGTGATCACCGATAACTTGGGCAGCTCTTTAATGTCATTTGCATTGCCGTTAATGATTCTTGATATTACTAAAAATGGTATCCACTTATCGATAATTTCCGTTATTGAAACATTGCCCATTTTGATTTTAGGTCTTCCAGCAGGTGCGTTAACAGATAAATTCGACGTTAAAAACATCCTCATTTTCAGTGATTTGATTAGATTAATCAGCTATTTGATTCTTTCCGCATCCTTTCTATTCCATTTAACAGTCAATTGCATGATTTTCATTATTTATGCGGTATCACTTGTTGTCAGTGTAACCAACACGCTTAATATGGTGTCAGAAATTACTTTTGT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAAATTGATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 1053720-1054217 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP029544.1 Lactobacillus helsingborgensis strain ESL0183 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1053720 36 100.0 30 .................................... CGATTAAGTTTGCCAACGGTGGAATTACTG 1053786 36 100.0 30 .................................... TTCCCAACGTGGTACTTTTTTCAATGGAGT 1053852 36 100.0 30 .................................... GCAAGTGGTGGTAGTGGTGTGCTTGGAACA 1053918 36 100.0 30 .................................... ATATCCTTAGACTGATTTTCATAAGTTTTA 1053984 36 100.0 30 .................................... CCAACGTAATTAAAGGCTCTACCATTGCCA 1054050 36 100.0 30 .................................... GAATGGTTTCATTTTTTTGAAACCTTCTAA 1054116 36 100.0 30 .................................... AAATTCAAAACCAGCTTAATTCCAAAGCTT 1054182 36 97.2 0 ............................T....... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.7 30 GTTTTAGATGGTTGTTAAATTGATGATGATTAGAAC # Left flank : CTGAAACTTTGGAAACTATCCGTCTTTCACGTAAGAACGGATACAACACCATGATTTCTCACCGTTCAGGTGAAACTGGTGACACATTTATCGCTGACTTTGCCGTTGCTGTTAACGGTGGTCAATTGAAGACTGGTGCCCCAGCTCGTTCAGAACGTGTTGAAAAATACAACCGTTTGCTTGAAATCGAAGAAGAACTTGGCAAAGGTGAGCGTTTAGCTACATTCCCAGACAGTGTTGACAAAGACTAATTTGTTAATAAAAAAGCCTGCAATATTGCAGGCTTTTTTAGTGTCAAAATTTTTAAAAATGTGTTTTTAGCATAAATTCAAGATTTAAACATCTATGCTATAATTTAAGTAAACATTTAATTTCTAGAACTGCATTATCAGGACTAGATTAGCTACCTTTTTCCTGATATTGCTGCAAAAACTGGTCGTGTTTCTAATATTATTTGGTTTAATTCAACCATATTATTAAAATTTGATGATAAAACATCG # Right flank : CTGAGTCTACCAGTGATAAACCTAGCGACTAGTTTTAGATAGTTGTTATGCAAAAGCAAAAAGTTATATTAAAGTCACAATAAAGGGCTTGCTTTTAAAGCAGGCCTTTTTGTTCCACCTATTTAGCTACCATTTAGAAAAGACAACAAATACTAGTCTTTTTACAATTTATTTTACGATATCTGTTCCTTAAATCTGTTCCTTAAATTCTTCATGCTAAATAACCAATGATTTTTAAACTATGATACAGACAATGTGGCAAGATCTGTAAATTTATTAAAACTAATTATTATTTACTTTCTTGTTGAATTCTCTCTTTGAAACATACTGAATTTTCTTAACATACTGACCTCTATGATCAATTTTGATATATTGTTTAGAAGGGTCGTAACCGCCCACTCTTCTGATCCTATATGGAAGTTTCTTACCAGTCTTGGCATCATAAGCTTGAACGTTAAAATACTTTTGCGTATTCTTTTCTACTTGAGCATAACTTTTAG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGGTTGTTAAATTGATGATGATTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //