Array 1 56986-57202 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAFKZ010000016.1 Staphylococcus aureus strain 64-065 NODE_16_length_57293_cov_26.098, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                  	Spacer_Sequence              	Insertion/Deletion
==========	======	======	======	=================================	=============================	==================
     56986	    33	 100.0	    28	.................................	CTTAGCATCCAACTGCGTTCCTCTTCAC 	
     57047	    33	 100.0	    29	.................................	GCAAGCAAGCCAACTGCGTTCCTCTTCAC	
     57109	    33	  97.0	    28	......T..........................	CTTAATATCCAACTGCGTTCCTCTTCAC 	
     57170	    33	  97.0	     0	..............................C..	|                            	
==========	======	======	======	=================================	=============================	==================
         4	    33	  98.5	    29	CTTTAGCGATTAGAGGCTTTTATGCAGTTGTGC	                             	       

# Left flank :   AAGTTGTTCAGCCTGCTTATCATGATGCGTTAATTTCCCAATTTGCTTAAATGTGTTGTATGTTTCATCAATTGATTGTGCATCTTTAACATACACTACTTTGATGCCTTGTTTCTCTAATGATGACAATACTTTATTAGCAGTTGCCTTTTGCGACTCATGCGCAAGAATTAGATCTGGCTTTTCCTTTAAAAGTTCCTCTTTATTTAGATTCAAAGCATCAAATTGTTTCTTACCCTCTTTCACATCTTTTGGATAATCATCAACCGTTGAAACACCAACTATGTATTTACCTAATCCTAATTCATATAAAATTTCAGTATTACTAGGCATTAACGAAACAATTCTATGGTACGGCGATTTAGACGAGCCATTATCATTGCTACCTTGTTTATCATTATCTTTCATACCACAGCCACTCAGGACAAGCATAAAAATCAAAATAAAAGCAATTAACGATTTCTTCACACTATCACATCTCCTTTTTAAAGCCTCTTGAG
# Right flank :  GGTAGCATCCAACTGTTTTTTACTTTATATGCTTCTATTTATTATATTATCTTACATCCTCAAAGAAAACAATACATCATTTTTTCACTTC

# Questionable array : NO	 Score: 2.59
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTAGCGATTAGAGGCTTTTATGCAGTTGTGC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:57.58%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-1.50,-0.30] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//