Array 1 37349-38107 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CDCF01000009.1 Streptococcus agalactiae strain Child6-1, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                     	Insertion/Deletion
==========	======	======	======	================================	====================================	==================
     37349	    32	 100.0	    33	................................	AATATATTTTGGCTGTGTTCTTGCGTAATAATT   	
     37414	    32	 100.0	    33	................................	CTTTCTTTGTAGCTCCTTCTATTATACCATTTT   	
     37479	    32	 100.0	    33	................................	AATTTCATCTGTTAGGCTCCTTTTTCGCTTTTG   	
     37544	    32	 100.0	    35	................................	AATCATAAGCTATCTCAACGCAATCTTTAAGTCGT 	
     37611	    32	 100.0	    34	................................	AATAAAGTCTGCAAATGTAAAACTTTTTAGAAGT  	
     37677	    32	 100.0	    34	................................	TTACTGTATTAACTTCTGTACCGTCTGAAAATTG  	
     37743	    32	 100.0	    36	................................	ATTCAATGAATTTAGGTTCGTGGGATATAGAAAATC	
     37811	    32	 100.0	    34	................................	TATTTTATATTAAAAATAAGACTACCATAATTAT  	
     37877	    32	 100.0	    36	................................	ATGTTACCTCCTTTTAAAAAGGTCTATCCTTGCCCC	
     37945	    32	 100.0	    35	................................	AAAAGATTATTGCCTTTTTTAATAACACGGCTAAA 	
     38012	    32	 100.0	    33	................................	TAATAATGATTATTTTTTTATTAATTCATTATC   	
     38077	    31	  78.1	     0	A....-.............T..A.T..C..C.	|                                   	
==========	======	======	======	================================	====================================	==================
        12	    32	  98.2	    34	GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT	                                    	       

# Left flank :   CTAAAGCAATACGTGGTGATTTGGAATCCTATCCACCATTTTTAATCTAGGAGTAAAATTATGATGGTTTTAGTAACCTATGATGTCAATACGAAGACTGTAGCAGGTAGGAGACGCCTTCGTCACGTCGCAAAACTTTGTGTTGATTATGGTCAACGTGTACAAAATTCTGTTTTTGAGTGTTCAGTGACTCCAGCTGAGTTTGTGGAGATAAAAAACGAGTTGCTGACAATCATCGACCAGAAATCAGATAGTATCCGATTTTATTTACTTGGTAAAAATTGGCAAAATCGTGTGGAAACTATTGGCAAAAATGATAGTTATGATCCTGATATAGGGGTATTACTTCTATAAACATTTATATGTGAATTCGGGTCACACATGAAAAAGCGGAGTATTCGCGCTAAAAAAAAGAAAATAGTAGTCAAAATCTAGTTTTTATTGAACCAACTTGTTTAATAAATTCTTGGTTTTAGTTATAAACGGTGCAATCGCGCACT
# Right flank :  TATTTTAAATCTTTCAAATTATGCTATTAAAATTGTCTAACTTTTAACAGAGATGCGATTAAATTGTATTAATCCCTAAAAAGATAAATTGCTAGTTCTTATGCTATAATAACTCTATCAATGTCAAAGGAGTTTTTATGTCAAAGGTGAGGAACAGTGCATTTTATGGCGCCCTACGCCCTGTCTTATTTACAATATCTATTTGATGCGACTATAACTCATGCTAGTGGGACTGCGACTTTTCCAAAAGGTCAAAGCGATAGTCAATCCAAACTACTCTTGCAATTATCAAATGGGGTCCTCGTAGATATCTTCTTGACAACACGTTTAAATTTACCGCATGAAATGATTATTTATGGAACTGAAGGTCGTCTAATCATTCCACATTTTTGGAAAACCACTCATGCAAAATTGGTGAGAAATGATACTAGTGCGCAAACGATTCAAGTTGACATGGTTAGTGATTTTGAGAAAGAAGCTTATCATGTTAGTCAAATGAT

# Questionable array : NO	 Score: 9.17
# 	Score Detail : 1:0, 2:3, 3:3, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCGCACCCTTTGCGGGTGCGTGGATTGAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         F Score: 4.5/4.5
# 	A,T distribution in repeat prediction:     R [5,9] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-4.80,-5.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-7] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [9.41,1.01   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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