Array 1 330026-329817 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP078019.1 Acinetobacter junii strain AJ_351 plasmid pAJ_351-2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 330025 29 100.0 31 ............................. TACCGATGGAAAAAATACCTCAGAGCGTAAG 329965 29 100.0 31 ............................. TACTAATGCAGCAAGAGTGAACATTCGGGCA 329905 29 86.2 31 T..G...........G........T.... AATATACTCTCAGGTGTGCCACCGCGTATGC 329845 29 93.1 0 ........................TC... | ========== ====== ====== ====== ============================= =============================== ================== 4 29 94.8 31 GGTTAGTTATCGCATAGGCGATTTGTAGA # Left flank : TTCTGAATAGCCTTTTAGAACAGAGAGTTAAGGCACACAATTTAAAATAGTCAGTGAGCCTATCAAAATCCTCATGTATGAAACCTAAGAAGTTCCACATTTTTCTGGGTATACAAGCCTAAATTTTATGGAAAGAATTCATATGCTGCTCCTTTAGCTAAAAGAGTATTCAGCTTACGATTCGTGGTTATTTTCAACAGTGCCTTCTGGTAAGGGTCGGCACCTGCACATCAAAAAAATCTCCCCCCAGAGTACGGCTGTTTCTATCGGGGGTAGAATATTCATTCTGTTACTTTAGACTATACTCTAAATTCACATAACATCTCTTATAAGAATTTCTTTGTAAGTTTCGAGTAAAGTTCTATAAAATCACCTAAATTTTTAATTCATGATTCAAGTTATTGAATATATGTGATTTTAATTCATTAAATTTTTTTTTGATTTTTTGCATAAAAAACTGTAAATTATTAATTAATCACAGTATATATTCTTAATATTGT # Right flank : AAGCCCATTTTTAAAATGGGCTTTTTTGATGGTGAGTTATCGCATGATTTTGAAATTAGTTATTTAAGATTCTCTATAAACATGTCAAGTGTCAAAAATAACCCTGCCTCTAGGCAGCTGCTCCGTTAGGACTAAAATTAACTGTACAAAATGCGGCACTGTTGCAAATAACCACGAATGGTAAGCTGAAGACTGTTTTAGCTAAAGGTGCAGCATATGAATCCTTTCCATGGTCGGCATTTTCAGGGCGAAATCATTCTTTGGGCTGTGCGCTGGTATTGTAAATATGGCATTAGCTATCGTGAACTGCAGGAAATGCTGGCCGAACGGGGTGTGAATGTTGATCACACGACTATTTACCGTTGGGTTCAACGTTATGCTCCTGAAATAGAAAAACGTTTACGCTGGTATTGGCGTAATCCTACAGATCTGAGCTCGTGGCATATTGATGAAACCTATGTAAAAGTGAATGGACGATGGTCTTATCTGTATCGTGCAGT # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTAGTTATCGCATAGGCGATTTGTAGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.00,-5.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 1122441-1129853 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP078018.1 Acinetobacter junii strain AJ_351 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1122441 30 93.3 30 ............................TG CTGTTCTTCAGGGGTTTTGAGTTGTCGCAT 1122501 30 93.3 30 ............................GA CGAACGGTCAATCCCTCACCACTTCCACAC 1122561 30 100.0 30 .............................. GAACAAATCAGAACTTTTCAAAGCAGCTCA 1122621 30 96.7 30 .............................C ACGTTTCAATCAAATACTGAGGATTAAAAA 1122681 30 96.7 30 .............................A ACTCATAAACCACCCACTCGCCATTCCACC 1122741 30 96.7 30 ............................T. CAATTCGACACTTACCGCCTGATCGCTGAA 1122801 30 96.7 30 ............................G. GTTCGCCCACTTTTCATTTCAGAAAAACCT 1122861 30 96.7 31 .............................C CACCCAAGGCTTCAGTTTAACGCAGTCATTC 1122922 30 96.7 30 .............................C AGCGGATACATCGCAGAAATGGTATTGAAT 1122982 30 93.3 30 ............................CA TGAATCTTTTACAAAGTCTTTGCCATTAAT 1123042 30 96.7 30 .............................A ACAATGGCAGCATAAAGGGTGTCACTTTTG 1123102 30 93.3 30 ............................TG TCGGATTCCAGTTACGTGTGGGTGATGAAT 1123162 30 96.7 30 ............................T. TGGCACCACCACGCAACCTTCGAGTTTTTT 1123222 30 93.3 30 ............................TG CCCTCATCAATTTCAGCGGTATTTTTTGCT 1123282 30 96.7 30 .............................G AAAAAGAAAAACCGCATTTAAGCGGCTTGT 1123342 30 96.7 30 .............................A CCGCCAACATTAGCAGCAAAAGTAGGACGA 1123402 30 93.3 30 ............................TC AGGAGCAAACAGCATGATTATTCGGCTATC 1123462 30 96.7 30 .............................C ACAGCAGGGCAGATCACAGCGTAAAGCACG 1123522 30 93.3 30 ............................CA CACCCGATGCTCTAAACGGGATCATGTTCT 1123582 30 93.3 30 ............................TA TTGCTAATCAAGCTGAAGCCAATGCAGAAA 1123642 30 96.7 30 .............................G GCATTCATTGCTGAGTGTATCAAACGTCAA 1123702 30 96.7 30 .............................C TCCAAGTCTAAAAAACATAAACGACTTAAG 1123762 30 93.3 30 ............................TA AAACCTCGCACCATCACATTAAACTTGGAG 1123822 30 96.7 30 .............................C CGCGAAGAACTTTAGCGACTTGAGTTGCAT 1123882 30 96.7 30 ............................C. GAAATTGAAAAAGGCAAGGCAGTTGAAGAT 1123942 30 96.7 30 .............................C ATCTAGTTGGCTTTTGACTGGTAATTCATC 1124002 30 96.7 30 .............................C GCAAACTTAACTTTTGAAATCCGCACAAAC 1124062 30 96.7 30 ............................G. CACGGGGTTTATGAGATCAATTTTGACAAG 1124122 30 93.3 30 ............................TA AATCCCCAACCTTAAACATGCTCACCCCCA 1124182 30 96.7 30 .............................C TGTAAAAACGCATTGAAAGAGCGCTTAATT 1124242 30 96.7 30 ............................T. GTGAGCACGACTTGCTAAGTAAGAACGACG 1124302 30 100.0 30 .............................. GCAAACTTAACTTTTGAAATCCGCACAAAC 1124362 30 96.7 30 ............................G. TTTGGGTCGGTCGATATTCAATAGCTATCG 1124422 30 96.7 30 .............................C GAGGAAAACGACTGGATTTACTATCCAGTG 1124482 30 96.7 30 .............................C TCAGATGTATTCAAACTTCGTGAAGTGGGT 1124542 30 93.3 30 ............................TA TGCGCTGCAAGAAATTCTTCGTGAAGCATC 1124602 30 93.3 30 ............................TC AACATCCATTTCAGCTGAAACAACCAAAAC 1124662 30 96.7 30 .............................A CTTGAGCGGACATGACCTTCCTCAAACTTA 1124722 30 96.7 30 ............................T. GTGGCACTGGATTGGATAAATTCCAACCGC 1124782 30 96.7 30 ............................T. CTAACCACCAAGAATAATCTGCACCTATTA 1124842 30 96.7 30 .............................A CCCGCAAAGATGCCCAACAAAACTAAGCCA 1124902 30 93.3 30 ............................TG TTACTGGGTCAGCTTGTGGAGTTGCAGTAG 1124962 30 100.0 30 .............................. GACTAAGCAGAGAACGTGGTACTTATCATA 1125022 30 96.7 30 .............................A CTGCTTCACAAGTATCTAAAGTCTTAGCTC 1125082 30 93.3 30 ............................TG GATAAGTCCAAAGATGACCATCAGGTAAAG 1125142 30 93.3 30 ............................GA TACGGTTCAGATCACATACAATCCAACCAA 1125202 30 96.7 30 ............................T. ACTGGAGAACTCCAAAGGTTTATCAATATG 1125262 30 96.7 30 .............................C GACGTTAAAATTGTTCCTGCACAAAAGACT 1125322 30 93.3 30 ............................TA AGCAGAATCCCTAACCTATGCAGGCAACGC 1125382 30 93.3 30 ............................TC ATTATCATGTTATGTGGTGGATTCCAAAAG 1125442 30 93.3 30 ............................TG TTGATGTTTCGTTTCTTAAAAATCTTTCTG 1125502 30 96.7 30 .............................C CAGCAGCATTAGAAATAACTTGTTGAGCAA 1125562 30 96.7 30 ............................T. ATGACGTTGATTTATCAAACGTACCTTTAC 1125622 30 96.7 30 .............................G CTGAAGATACGAAAGTCGATATCGCTGAGA 1125682 30 100.0 30 .............................. AATCTACGCATAACATAATGCACAGAACAA 1125742 30 93.3 30 ............................CG AACAGGTTTTAGCTGAATATAAAGAAAACT 1125802 30 93.3 30 ............................TC TGCAAACTCATAAATCATTGCAACATCCAA 1125862 30 96.7 30 .............................G CATATCGTCCACTGGTCGGATCAATCCCCA 1125922 30 93.3 30 ............................TG ACGATCTCAAAAAGCAATTTGAGCAAGACC 1125982 30 93.3 30 ............................CG AACAGGTTTTAGCTGAATATAAAGAAAACT 1126042 30 93.3 30 ............................TC TGCAAACTCATAAATCATTGCAACATCCAA 1126102 30 96.7 30 .............................G CATATCGTCCACTGGTCGGATCAATCCCCA 1126162 30 93.3 30 ............................TG ACGATCTCAAAAAGCAATTTGAGCAAGACC 1126222 30 93.3 30 ............................CG AACAGGTTTTAGCTGAATATAAAGAAAACT 1126282 30 93.3 30 ............................TC TGCAAACTCATAAATCATTGCAACATCCAA 1126342 30 100.0 30 .............................. CTGATAAAGAAACGTCGCCAAATGCGGTAT 1126402 30 96.7 30 .............................A CCCTTTCGAGCCAAAGCGCAACCTGTGCCG 1126462 30 96.7 30 ............................G. GCTCTCTCCACCCCACCGCAACTGCATCAG 1126522 30 93.3 30 ............................GA TGTAGGTACGCCACCTTTTGAGCCGATAGC 1126582 30 93.3 30 ............................GA CCAGTGAAACCATTACACCTGCAGGAGAGC 1126642 30 93.3 30 ............................TG CCAATCCCTGCAGGAATGCACCTGCGCCAA 1126702 30 93.3 30 ............................GC TTCCTGTGATCTCTAATGCTATTGGGTCAA 1126762 30 100.0 30 .............................. CCAGCCATTTTTGACAGTCTGCTTGTGAAA 1126822 30 96.7 30 .............................G GTGAAATTACCCAGGTATCACACCAGGTGA 1126882 30 96.7 30 .............................G TGTAGAGGTCAAAAGAATTGATCATTTGTG 1126942 30 96.7 30 .............................G TGATTGAAGTTTTCAAAGACTCATTGCTGC 1127002 30 96.7 30 .............................A GTTGCAATGCTGGCATTAAGTTACCTTGAT 1127062 30 96.7 30 .............................G CAGGTCAAATCATCCTTTCAGCTTTTGGTA 1127122 30 96.7 30 .............................G CAGCGCCACCTCTAAGAACTTTTGCTACTT 1127182 30 96.7 30 .............................A GGAGGACTTTTTTTGCAAAGTTAGATAAAA 1127242 30 100.0 30 .............................. AAGAAAACGTCAGCATGACCACGACCGTAA 1127302 30 93.3 30 ............................CA CACCCGAAGCTCTAAACGGGATCATGTTCC 1127362 30 93.3 30 ............................GA TCTCAAAGAATCAGGTCAGATCGAACAAGA 1127422 30 100.0 30 .............................. TAATCTGAACATTGGCTGGTGGATATGGTC 1127482 30 93.3 30 ............................GA CTCAAGTTCTTCTCTCTTGTTCTTTCTGAT 1127542 30 93.3 30 ............................GC ATTGTGGCCCACTGCGCCAAAATGCTTTGC 1127602 30 100.0 30 .............................. CGCGCTCAACTATGATCATCTGATAAGTGA 1127662 30 93.3 30 ............................CA ACCACCCTCGCCCTTATCACCGCCAAACAA 1127722 30 96.7 30 .............................A CGTAAAAATTGATCTGCTGCACCTTGATAG 1127782 30 96.7 30 ............................G. AAAGAATTAGTCCTAAATTGTCCTGTAAAT 1127842 30 93.3 30 ............................TC GATTTGAATCTAAAATAGACTCAGTCAATT 1127902 30 100.0 30 .............................. ATAACCAATTAATTGGTTGTTTCATGAGTT 1127962 30 93.3 30 ............................TC AGAGCGCAGCACAGCAAATGGCACAAAACT 1128022 30 96.7 30 ............................G. TACAGCGTAAAATATGGAATTTTAAAAATC 1128082 30 93.3 30 ............................CG AGCTGCTGCTAAGTAATAAAAAGGGGGTTC 1128142 30 96.7 30 ............................G. TGATTTGTACAGTAATTCGCTTGTTATTAT 1128202 30 96.7 30 ............................T. GTGCGAACAAGGACTGGATTATTAAATCCT 1128262 30 96.7 30 .............................A GCCAAAGCGCATGAGGTGGCGAATCTGAGA 1128322 30 96.7 30 .............................A CACTCACCCAAATTAGAGCAGCTTTGCAGA 1128382 30 93.3 30 ............................TC AAGATAAAACTTATCGCGTAGCTGATCAAG 1128442 30 93.3 30 ............................GC TTGAAACTCTAGCTAATGTTTGTGATTTTC 1128502 30 96.7 30 .............................A TGATTCAACTGCGTCCAATAATGGGGATTA 1128562 30 100.0 30 .............................. TAACAACAACTACAAGCGACTTATTCACTG 1128622 30 96.7 31 .............................A ATTGGAGCAATACTGAAACCTATCTGACTGG 1128683 30 96.7 30 .............................C ACATTAGTCAGCCTCCTTCGTAGTCCATCC 1128743 30 100.0 30 .............................. ATATGAAATAAGTAAAATAACAGCGAGTAA 1128803 30 96.7 30 ............................T. TAGCTAGAAAAATAGAAAATGCTTATAACT 1128863 30 93.3 30 ............................TC GGGTTGAGCAATTTCTGTAGTGATTGGCTC 1128923 30 96.7 30 ............................T. GTGAAAACTAGTGAGATCCTGCTTGCACAA 1128983 30 96.7 30 ............................T. TAAAAAAGGAAATACACCCTTTAATCACAA 1129043 30 93.3 30 ............................TC TCGGATATGCACCTATCTTTTTCATTGAGC 1129103 30 93.3 30 ............................GA TTAGGGCAATGGCTGGCGATTCCACATGGG 1129163 30 93.3 30 ............................TG AAAATAATGATTGGAGACAAACGCCCGATG 1129223 30 96.7 30 ............................T. GTCGGCATGCACTATCACTTACACCGTGCT 1129283 30 100.0 30 .............................. TGCGGTAATGCTCAAAGACGAGATCGACGC 1129343 30 100.0 30 .............................. GTCAAAAGCCAAAGCAACTTTGTGCATTTG 1129403 30 96.7 30 .............................G TGGTATGCAAATGAAGTTGATTCTTGGAGA 1129463 30 100.0 31 .............................. AAAAGCCCCGATTAATTGGAAAGGGGGCGAA 1129524 30 100.0 30 .............................. CAACTGGGGCAGCCTTGAGGACTGGAACAA 1129584 30 96.7 30 ............................G. GCATTTAAACGTGATGCTTGCAGTTAGTTT 1129644 30 96.7 30 ............................T. GCCAAGAATCCAAACGGCAAAGTTATTCCA 1129704 30 96.7 30 .............................G CAATTCATGGTATGGGTTTTATTAGCGAAT 1129764 30 96.7 30 .............C................ AAAGCAATATTGACCAATAAAAGTAAGCGT 1129824 30 93.3 0 ............................TA | ========== ====== ====== ====== ============================== =============================== ================== 124 30 95.9 30 GTTCATGGCGGCATACGCCATTTAGAAAAT # Left flank : GTAAATGGCTAGAACGATTCATTGATTATGTTCATATCATTCAACCGAGAGAAGTACCTCAAGCTAAAGTTACTGGTCATGCACACTATTATCGAGTCAATCCAAAGATGAGTGTTGAAGAGCGTATAGTTCATCAAGCGCAACGTCGAAATATTTCTTTGGATGAGGCTACGCAGCATTTTAAACAATATATTGAAAAACCTATTATTGAGCCTTATGTGAGTTTAAAAAGTCTGAGTGCAAAACGAGATCAAAATATAGATCGACCATATCGTTTATATATTGGTAAATCTCTAGTTGATGAGGCAAAAGATGGAGAGTTTGGAACGTATGGACTAAGTCGAATGGCAACAGTTCCAGAATTTTGACCCAATATTTTTTTACTATTTAACAGCTTAATAAAATCAATAAGTTACACCAAGTCGTTTTTTGATTGGGTAAATTGCTAAAAAACCATCATAAATACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : ACATGTGATTTATTCATATGAGCCATTTAGAAATGTAACGGTCATGATTGGCATTTGTTCTGTGTGTTCATGGCGTAATTTATTTTAAGAATTAATACGTGACATATAACTGTTGTTTTAAATTCATCGTATTATATGTCATTTAAAATACATCACATCAAGAAATATGATTCTTACTACATTCTAGATCTTTAATTTTTAAATAAGAAAATATACCCTGAAACCAACGTTTTTTTAGTGAAATTTTCATGCGCGGTTTATACCTCATCACCAATGATGATCCCATTCAACTTCTTTTAGAAAAGTTAGAGACTGCACTAGCTACTGGTCATATAGCTATTTTGCAATATCGTCGAAAAAAAATAGAAAAAATAAATCAACCATCTGAAGTGGAGTTGATCAAAATCCTGTGTGAAAAATATCAAGTCCCTTTTGTCATTAATGATGATTTGGCGTTAGCAGAACAATTTGGTTTAGGTGTGCATCTAGGGCAGTCCGAT # Questionable array : NO Score: 5.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.15, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //