Array 1 155008-157052 **** Predicted by CRISPRDetect 2.4 *** >NZ_MAHO01000009.1 Elizabethkingia anophelis strain CSID_3015183679 16-042_contig_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 155008 47 100.0 30 ............................................... GAAAAATGTTCCTTTTGGAAAAGATGCTAA 155085 47 100.0 30 ............................................... GAACTGACTGTAATTTCTTCTTTGTCGTTA 155162 47 100.0 30 ............................................... TTTATTTTCGTATTACTGTTAATGGTGAAC 155239 47 100.0 30 ............................................... AATGGTTCAACTGGTTCAACATGCCATCAG 155316 47 100.0 30 ............................................... AATAATCACGTATTATATACTCAATGGTTA 155393 47 100.0 30 ............................................... GCTTTAGCCTTGGCAGCTATTGGGGTTATG 155470 47 100.0 30 ............................................... AAGGGCTACAATTTGAATTTACACCAACTA 155547 47 100.0 30 ............................................... ATTATTTGATAATGAAACTAATATTGAAAA 155624 47 100.0 30 ............................................... TAGATTGACACCGTTTTTTGAATTAATATC 155701 47 100.0 30 ............................................... TTAGAACTAAAGGAGCGTTCCGGACTTGTG 155778 47 100.0 30 ............................................... TACCCAGTCATAAGCTTCTGCCTTTTCCAG 155855 47 100.0 30 ............................................... GGAGAAAATACACCTCCTGAAATATAGTAA 155932 47 100.0 30 ............................................... TTTAAAATTTCTGTTAAATAATTCCTTACA 156009 47 100.0 30 ............................................... CCTATGGGTGCAGCTGCTTTTGAATATGAA 156086 47 100.0 30 ............................................... TACAACCTACTAGACTTATTTTACTACCGT 156163 47 100.0 30 ............................................... GGTGTTGGTCCTGCTGCTAAAGCTGTCTTA 156240 47 100.0 30 ............................................... ATGAAATTTTCATTGATTCAAATCAAAAAA 156317 47 100.0 30 ............................................... CCTCTGTTTTTTAGTCTTGAAACCTCAATC 156394 47 100.0 30 ............................................... GCATCACGGTTTGTATAACCTACATTTAAA 156471 47 100.0 30 ............................................... AATTACAGAAGGATCCGTTTTTATCAAATC 156548 47 100.0 30 ............................................... AGGTAATACTTCTTCTATTATTTCAGCAAG 156625 47 100.0 29 ............................................... AAGTTGGCGCAAAATGCTGCAGACGGAAA 156701 47 100.0 30 ............................................... GCTGCCGGAAAAGGTGACAGCCCGAATGAT 156778 47 100.0 30 ............................................... GAGATTGTTTCTTCATATCCTCTATCCATC 156855 47 100.0 30 ............................................... AGTGCCGACGTAAAAATAATAAAAGGAGAA 156932 47 100.0 30 ............................................... CTAAATAAAAGGTAGACCACGAATCTGGAA 157009 44 91.5 0 .....................................--..-....T | ========== ====== ====== ====== =============================================== ============================== ================== 27 47 99.7 30 GTTGTGTTATATCACAAAGATATCCAAAATTGAAAGCAATTCACAAC # Left flank : GACGGAAAGACCAGACCTTTGCTGGTGGCTGTAAAAACAACAGCATCATCACTATATAAATGTTATACAGGAGAAAAACGTTTGATTGCTTATCCTGAACTGATATGAAAGCCGAAAGGTTTAATGCTTACCGGATTATGTGGGTTCTAGTACTTTATGATTTACCAACCGAAACAAAGGAAAATATGCGGGATGCCAATCTATTTCGTAAACGTCTGTTAGATGATGGCTTTTCGCTTTTTCAGTTTTCAATGTATATCCGCCACTGTCCCAGTAGAGAAAACGCAGAGGTCCACATAAAAAGGGTAAAAGTCATGTTGCCTAAAGCTGGAAAAGTTGCTATTATGTGTATTACCGACAAACAGTTTGGTGATATTGAAATTTTCTTCGCCAGAAATAAAGAAGAACCACCGCCGACCTTTCAACAGTTGGAATTATTCTGATTTTTAAATTCTAAAAAATAATAAAATCCGTTGAAAATCAACGGATTAAATTTTGAG # Right flank : TAAATTAAGGTGTTTTTATTGTAAATTAGATTTACATAATGAGCCTTTTGTGGTTAACCCTGTTTAGTCGATAAAGATCATTATAAAAAAACAAAACCTTTCAGTACTCCTGAAAGGTTCTTTGTATGGTTTAGGTTTTTAATTTTAATCATGCATTTCGCTTTCGACATAGCCTTCATCTTCGATCTGGAAGGTCGTATGGCTAATTTTGAAATTACTGGTCGCCTGATCGGTGAGTATCCGAAGCATTTGGTTATGCGGAATGCTTTGATCAGAGACAACATGGGCGCTCATCGCGTTGATACCAGAGGTTAGTGACCATACATGGAGGTCGTGCAGGCTTTTAACACCCGGAACTTTTTCCATGGTACTGCGCAGTTCATCAATATCTACATCTTTAGGAGTGCCTTCCAATAATACATGAATAGCTTCCATCAGAAGTCGCCATGTTCTCGGGAAAATCAGTAAACCAATACCCGCAGAGATCAGCGGATCAGCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTTATATCACAAAGATATCCAAAATTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCATTTTTGAGTATCTTTGAGATATAACACAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,4.87 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], //