Array 1 2024903-2025061 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013850.1 Clostridium botulinum strain B305 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 2024903 30 100.0 34 .............................. AGCATATAATCAATTTTCTTACCCTTTTCAGTAT 2024967 30 100.0 35 .............................. TAATAATTTCATTCCTGGATCTAATTTTTGTATTA 2025032 30 90.0 0 ..T.........................GC | ========== ====== ====== ====== ============================== =================================== ================== 3 30 96.7 35 GTCGAACAGTAACATAAGATGTATTTAAAT # Left flank : AAATAAATTTGAAATTATTGTTAATGAAGATGAAGTAAGCCAAAGAAAAGCAACTATAGCTTTAGGAATGGGTTTAGGTGAGAAAGGAAGCAGTTTAGGTGCAGGATTTTGTATTTACAGATAAACTTTAAATAGGCGTTTATTTATTATTGTTGAACCTTAATATGGGATGTATTTAAATTTTTCTTAACTTCCTTAAATGCTTACATATTCTTTGATTGAATATTAACATAGGATGTATTTAAGCAGAGAACCCAAATCTATGATTTGGCGTGAATCGCTTACTCCTTCGAGAAGAGGAGAAGGAGTTTTATAAATTGAATTTTTTCAGGCGTAACAAATTTCAGAACCTATTCTAGTCATTGATATATAAGGGTTAGGATAGGTTCTTGTTGAGAATTTTTCGAAAAGTAAAATCACTTGGAAAGCTTTCTATAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATG # Right flank : CAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAACCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATGATTGAACATTAACATGAGATGTATTTAAATTGATGAAAAATAATTATGCACCTGGATATTTAAGAAATTGAACATTAACATGAGATGTATTTAAATAAATTTATGGATCTAATACTCATAAAGATGATTTTATTGAACATTAACATGAGATGTATTTAAATTTTATTAGTGCCATTCCCGCTGGAGAGTATTGTGTCCATTGAACATTAACATGAGATGTATTTAAATAATGTTAAAACAGTTACA # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 2 2025315-2025673 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013850.1 Clostridium botulinum strain B305 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 2025315 30 100.0 36 .............................. TGATGAAAAATAATTATGCACCTGGATATTTAAGAA 2025381 30 100.0 35 .............................. AAATTTATGGATCTAATACTCATAAAGATGATTTT 2025446 30 100.0 37 .............................. TTTATTAGTGCCATTCCCGCTGGAGAGTATTGTGTCC 2025513 30 100.0 36 .............................. AATGTTAAAACAGTTACACCAGCTACAAGACCAAAG 2025579 30 86.7 35 G.....T.G.......G............. TGGCTTCTTATTGCCTGTTGTATCTTTTCTGGTAG 2025644 30 80.0 0 .....G..C...G..AG............C | ========== ====== ====== ====== ============================== ===================================== ================== 6 30 94.5 36 ATTGAACATTAACATGAGATGTATTTAAAT # Left flank : AAAATCACTTGGAAAGCTTTCTATAAAACCTTGTAAAATCAATGGGTATATGATATTCTTAGAAATAAGGAATGGCTATTTTACTATGGTCGAACAGTAACATAAGATGTATTTAAATAGCATATAATCAATTTTCTTACCCTTTTCAGTATGTCGAACAGTAACATAAGATGTATTTAAATTAATAATTTCATTCCTGGATCTAATTTTTGTATTAGTTGAACAGTAACATAAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTGCAATAAATTTGCGAACCTATTCTAGACGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATGGCTATATGCTATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : CAAATTAAAATCCATGATTTTTTCTCTTTAAAGTTGTTTAGTTTTTAGAGCAGCGTTGATAATATATCAATTTTTAAGAGAAGTCATTTTAGACTTCTCTTAAGTGGTATTTTATTTAATTGTATAAAGTACATTAGTTAAAACTTATTTTTTCAAATGTACCCTTTTCTATGTGTAATTCAATATCAATATCTGCTTTTTTATAACCTACTAATTTTATACGATTATTACCTTTTTTTATTGGTAAAGTTAATGATGTTGTTCCTTTCATAGTGGCTTTATCTGTATTTTCTACAAGATTAACAACCGTATTGTCAGGAGATATTAAAACGATTTTTGCCTTTCCACTTTTTACTGATAAGATATATGGAACTTTCAAATCAAAATCAGAACTACTTTCATATGTCCAAATAGTTCCACTTCCACTTAATTTCAACTTCCCTTTATATATTCCAGATTCTATGATTTCATCACTTTTATCTAATCCAAAAGTATCATAT # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 3 2471853-2470637 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013850.1 Clostridium botulinum strain B305 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 2471852 29 100.0 38 ............................. GATTCATTATTCGCCATTGCTTATCACCTCGATATCAA 2471785 29 100.0 37 ............................. TCACTTTCGCACCCTCCCTGCTGTATTGGTGTATATA 2471719 29 100.0 37 ............................. ATATAGCTTTTAATCTGTTTTTTAGAATCATAATCAA 2471653 29 100.0 35 ............................. CTGAAGCCTTATAACGTTCCCTAAACTCTGTATCA 2471589 29 100.0 35 ............................. ATGGTCTTATATTATTATGAGCTTCTAAAACTAAA 2471525 29 100.0 37 ............................. CCGACTTGTTGTTTTAGTTCTGCAAATATATATATAG 2471459 29 100.0 35 ............................. TTTTTAGGGAATCTATTAATCTTAAACTCTCTTGG 2471395 29 96.6 37 ...G......................... CATTGACCTATTACATATTTATCAAGTTCTTTAACAG 2471329 29 96.6 38 ..............A.............. TAGCTTATTGATTCGTATTTACTAGCGATTGTATTAAG 2471262 29 93.1 37 ..............AG............. TTTCCACCTAATCTAGTAATACCGTCTACATCAAAGG 2471196 29 93.1 37 ..............AG............. TTTAATCTATTAATATAAACTTTTCTACTTTGAACAG 2471130 29 96.6 36 .......A..................... GCTGTAATGTCTGTAGTGTACTCCAAAGCGTAGTTG 2471065 29 100.0 38 ............................. ACTTCTCTTTGTAATTCTGAAAGAACAAAGGCATTTCG 2470998 29 93.1 36 ..............AG............. TTTATAAGAACCAATTTTCTAGCTTGTATCTCTTGG 2470933 28 96.6 37 ..............-.............. CAATAAGCTCCTGCTAAAGTTTTACCTCTTAAATATG A [2470916] 2470867 29 89.7 37 ...........T..AG............. TATTTATCCACTTTATTACGTTCTACTAACCATTTTG 2470801 29 96.6 38 ..............A.............. CAAATTTTATCTATATGATTTAGATTAACTCTTTCAGG 2470734 29 96.6 38 .......A..................... TGTACTGTTTGATTAATGTTGTCTATCTGATTTTCAAG 2470667 29 89.7 0 .......A......A.............A | TA [2470641] ========== ====== ====== ====== ============================= ====================================== ================== 19 29 96.8 37 TTGAACATTAACATGAGATGTATTTAAAT # Left flank : CTAAATCAATAGTAAATGGTGTTTTAGGTACATCTTCAAATGTAACACCTGCACCAAGCGAACCAACAAATAATAATAGTTGGATTAATTTAGATGGTAAAACAGGTACAATAAATACCCCAAGCGGTGTAAATATTAGAGAAAAGAAATCTACATCTTCTAAAATATTAGGGGCTTTACCTAATGGTGCCAAGGTTAATTTATATCGTAAAGAAGGAGATTGGATACATATTTATTATCCACCACATGGGGGTTATGTGTATGCTAAATATATAAGATATTAAATTTAAAAGGTAGTTCCTTAATTGGAACTACCTATTATTTTTCCAACCTACTTTAATTTTAAAACCTATCTTACTCATTGCTATACAAGGGCTTAGGATAGGCTTTTTATATAAATTTTAAATTATCTCAATTGGTTGGAAAATTTTCTTTAGAATCTTGTAAAATCAATACTTCTATGTTATCCTTAAAAATAAGGAATGGCTATTTTACTATGA # Right flank : ATGGTAGTTGTAGCTTATGCTATAGCTATTATTTTTTTATTTTTTATTGGGAAAATTATTGTAATTTATATAAATGTTTCATAAAAAGGTATTGACTTCTTATACTACACGTAGTATAATTATAATTGTAGGAAGGAGGTGAAATAAAGATGGTTGATAAAATTGAAAAAGTCGGTAAAGTGGTGGAAGCACTTACCGACTTGGCACTTAAAATAGGCACTTTACTAGCAGTCATTAAAATGGTGCTAGATAGCCTAAAATAAACCCATAGGGAGGGTAAAACCTCCCTTACTAATAAAATATCACATTAACCATCTTAATTCAACATGAAAAAAAGTTTAATAAAAGAAGCTTTAAGACTAGTAGGTAGTATAGCCTGGTTAATCATAATAATTATTGGCTTAATAATCCTAATAGTGAAAGGAGTATTTTAATTATGAATGATAAAAAATCACCTCAAACAATAGCAAATCAAAATTGGGAGAAAAAAAATAGAGAGT # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //