Array 1 27264-25645 **** Predicted by CRISPRDetect 2.4 *** >NZ_APSO01000105.1 Neisseria meningitidis 97018 gnm97018.contig.104_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 27263 36 94.4 30 ........G...A....................... TTTTTGTATCCATTCCCAGCCGGAAATTAA 27197 36 100.0 30 .................................... CTTCTGCCTTTTTACAAGCTCGCTTTCTTT 27131 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 27065 36 100.0 30 .................................... CTTTAACTTTGACCGTGTGCAATCCAGTTA 26999 36 100.0 30 .................................... AACGGCAACCCACTAAATTTTGCAAATGCG 26933 36 100.0 30 .................................... AGTATTCGTCGATGATGGAAACTCGAGCAT 26867 36 100.0 30 .................................... ATGATGCAGGCTGCTCCGTCATCGTCTGCA 26801 36 100.0 30 .................................... CCAAATAGAAATACATACGCCGAGTAATTA 26735 36 100.0 30 .................................... TTTCTTTTTGTAATTGTTCTGCCTTTTTTA 26669 36 100.0 30 .................................... CAATAACGGCGAGTTTACGCATCAATGCGG 26603 36 100.0 30 .................................... TACCCACGGCGGAAACCATTGCCACAAAAC 26537 36 100.0 30 .................................... TTAAAATAATAACCCAATACACGATGTTAA 26471 36 100.0 30 .................................... TCCTGCCAATTATCATACATAAGATTTTGC 26405 36 100.0 30 .................................... TTGCGTCTATGGTGTCCTTTGAGATGTCCA 26339 36 100.0 30 .................................... AAAACCAACCGGGTATTCATACACAGCCAA 26273 36 100.0 30 .................................... CCGTTGATGACGGATGTGTCGGGTTGCGGA 26207 36 100.0 29 .................................... TCGGCCGCTTTATTTCTGCCATATCGACG 26142 36 100.0 30 .................................... CCTATGCCTGTTATTGTTTTCAGCCTTTTG 26076 36 100.0 30 .................................... TTTAAAACCGCAAACCAGTTTGTATCCTAT 26010 36 100.0 30 .................................... AAAAAAGTTGCGGGATAAGTTACAGTTTGA 25944 36 100.0 30 .................................... TTCTTCAAATTCCTTAGACGCAATTAATGC 25878 36 100.0 30 .................................... GAATCTTTAAAGGCAGATTCGGGATTTCCC 25812 36 100.0 30 .................................... TGATGCGGCGATACAGCGAGCCAGTTGCAT 25746 36 100.0 30 .................................... CGGCAACCGTGCCGGCATCAAACATCAGCG 25680 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.8 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTCTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //