Array 1 1515975-1513007 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACAWU010000002.1 Natronomonas gomsonensis strain YCN60 Scaffold1_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ======================================= ================== 1515974 28 85.7 37 ..T...T....GT............... CAGAACCCACCTCCCTCAAAGACGTACGCGCGGCCGC 1515909 28 100.0 37 ............................ TGGGGTTCGATGTCGTACATCGCGTTCTCGGCCTTGC 1515844 28 92.9 37 ............A..A............ TGCTTTCGGTGGCCGGCGATGGCGTGCCGTGGATCGC 1515779 28 96.4 39 ................G........... CCTCAATTTTGGCGAGGAGTTCGTCACGCGGGACCGTGC 1515712 28 96.4 37 ............A............... GCGTTGTTCTCCGCCGTGTCAAAGAGCGTCTTGGTGC 1515647 28 92.9 38 ............T.A............. AGTGACCGCAACACGGCCGTCCTCCGGGTAGTGGTTGC 1515581 28 92.9 38 ..........T.T............... CACCTTCCGACCATTGGACCAGTGGCGGGCGTCCCAGC 1515515 28 96.4 38 ...................A........ GTTGTCGTTCGATGTGTCAACCTTGGTCAGATCATCTC 1515449 28 85.7 35 ............AAA....A........ TAATCTCTTGAGATGTTCTTACCGTCGTCAAGTCC 1515385 28 75.0 37 .......CTAT.G.A....A........ ACGACGAGCGCAATGGCACCCATGATAAGTACCATAC 1515320 27 92.9 38 .......-..T................. CGCTGCCGGTCCCCCAGGGCTGCTGTTTGGGTGGATGC 1515255 28 89.3 36 .........T..T..............T GCGAGACACGCGTGGACGCGATCTTGGTTGTGCCGC 1515191 28 85.7 37 ............A.AA........G... TCGAAGCGGTACGCGTCCGGGTCGCTGTCAGTCCCGC 1515126 28 92.9 36 ..............C......T...... AAGCCGCCCATAGGAACCCGCAGAAGTACCTCGAGC 1515062 28 89.3 37 .......A....G.......C....... TCTTTGTAGCTCATAAATTCCTCTGCCGGTCCAGCAC 1514997 28 75.0 38 .AT..G.A...GA......T........ CCACTCAATTACGGGGTTGTCCCGGTCCGGGGTGTTAC 1514931 28 85.7 37 ........T...T.AA............ TCGCTGTCAGCCCGGAGGGGGCTATCGTTCGGGTTGG 1514866 28 85.7 38 ........T.A.T.A............. GGGGAGCCACGGATACATCTTGTACGTGACGAGGTCGC 1514800 28 92.9 37 ................A..A........ CTCTACGCGCAGCACTGCGCAGACTTCGAGATGTGGC 1514735 27 75.0 37 .....A.C.A.G.-A............T TCAATCGCCTCTCATATCATGTACGCGACCGTCATGT 1514671 28 71.4 36 .....T.C.A.GA...C..A.....T.. ACGTCTGACTCAAGATAACGATCGGTCTCTCGATGC 1514607 28 85.7 39 ...........TA.A....A........ TGATCTCGATGTCACCGAGTTTCTTCAGCCCGCGCGTGC 1514540 28 89.3 37 .......A..G.A............... TAGTGCTTCACCTCTTTCGGGAGATCGTGATTCGGGC 1514475 28 85.7 37 ...C........A..CG........... GGGAGGGACACGCGGAAGCCGTCGCCCTCGCGGTCGA 1514410 28 85.7 37 ..........T.AT.....T........ CCGGATGCCCGAAGCATCTCGGCGCCGCTGTTCAGGC 1514345 28 85.7 38 ...C........A..CG........... TACGTCTATAACTCCGTCTGTCGCGTGCTGTGTTCTGC 1514279 28 100.0 38 ............................ TTGGCTGTCGATTTCATAGCGATTCGTTCGGGTGTCGC 1514213 28 96.4 37 ............A............... GCGGTCCCGAGGACGAACGTTGTCCCGTCAATGATGT 1514148 27 92.9 38 ............T-.............. AATTCAGGACACTCTGCTCGACGCCAACGAGTGTCTGC 1514083 28 96.4 37 ............A............... TCGGTGACGCTCTCCATCTGCGTACAGATGCGCTCGC 1514018 28 82.1 34 ............A..A.TTA........ AAATCTCTTGGATGCCCTTACCGTCGTCAAGTGC 1513955 28 75.0 37 .......CTA.GG.A....A........ ACGACTAGCGCAATGGCACCCATGATAAGAACCATAC 1513890 28 89.3 37 ............A....A.........T AGGTCCGCTTCCCCGGCAGTTCCTGGGTCGCCGTAGC 1513825 28 92.9 37 ............A.A............. AAATTGAGGGTTTCCCGGTCTTCAATCAGGCCGGCGC 1513760 28 89.3 36 .......A..T.T............... CCTCCGACTAACTCACATCGTATTCGGGGGCCGGGC 1513696 28 92.9 38 ............A..A............ GTCGACGACGAGCTTCGGCGTGATGGCGTCGGCCTCAC 1513630 28 96.4 38 ................G........... ACTCTCCGACGTCGAGATCACGTCGGGGATCGAGCGGC 1513564 28 100.0 37 ............................ AAAGCGCATACGTGGTGTATGCACTGCATACGGCTGC 1513499 28 100.0 38 ............................ GCGACCAAAGGGCTCGGGCCACTCGGCGGGATGGACGC 1513433 28 96.4 37 ...........G................ GACCAAATCCACGGCCAACTAATCTTCGTCTGGGAGC 1513368 28 96.4 38 ............A............... CATCGGAACAGCGACCGTCTGCGGGACGGTCGTGCTGC A [1513354] 1513301 28 85.7 38 ............A......ACT...... TGGGTTGATGAGCACCGACTCAAATACGAGGGTGCAGC 1513235 28 96.4 39 .......T.................... GCGGATTAGGTCGTTCATTGGATTATGTCGGTGGCGAGC 1513168 28 96.4 39 ..........A................. CGTTCGCACCGCAACTGCCGCAGCGGTTCGTACAGGTGC 1513101 28 92.9 39 ..T.........A............... GCTCTTTTATCCGGTGATTGCATCCTTAGCAACTCGAGC 1513034 28 89.3 0 ............A......AC....... | ========== ====== ====== ====== ============================ ======================================= ================== 46 28 90.0 37 TTCAACCGCCCACGGGTCCGTCTGAAAC # Left flank : GAGAGCAGCCAAGAAGCCCGGGAGATCCTCACAGACGGTCTCTCGAAGCTCCGGGCAGCCTTCGGTGGCAAGGATGCGGACGCTTCCCAGTTGGCGCGACACGGCCAGGCTGTCGTGAATCTCACCGATGGGACGAACGTCCATATGGAGTTTGCGCCGACCGTGAGCTAACCGGCTGCCTGCTGAGAGGCATCACTATTCTGGGCAGTGTTAAGCAGCAAAAATAGCTGCTTTTTGGCCCTACTCAGCGGTGGTTTCTGCGGTTTGTTGCTTTGGTACTCAGCCGGCGGTTCGTTGACGCTGTAGAATTCGACTACCCAGCCCTACTTTCCGTTTAGGGGGTGTGCCTAAAGGCACCCAACAAAGGACACCTACGGGCCTTCGGCCCTCCGGTACAGCACCACAACGGCAAAAAGTACTCTCCTGCTATAGGGAGATCAATCGCACGAGTTCGTTTGAAGCACCTTGGGGTAAGAACTGGATGAGATAGTGGTCGCAAT # Right flank : CATGGCAACTCCTGCAGCCATAGGTCATCTTCCGGCGGAAATCACATCAACATTTCCGTCGACCTCCAATAGCCGCCAATCATTAACGGGTCGATGAATTCCAATCTCAGAGAACATAACCTGTTCGTTTACAACTGGACACCACTTCCTGTCTCGATATCGTACTTTTCGTGGATTTCATCCGGACGCACGGCATCCAGTTTGTCCTCGTCAGATTGAGACTCGTCAGAGACGGTCACAAGACACTCTTTGAGTTGGTTGAACTTCTGTCTCGCTGTCTCCCATTCATCAGCCGCCTTCGCGGCAACGTACTCGTCGTAGTGAGTAGTGTCCTCTTCGGTTACTAATACGAGAACCTCCTTGGACGACTGTGTCTCCTCAATCAACGATGCTTCCCGCAGTAGTTTCCCCTTCGCAGTATCGAACGCGGCCGTGAGTCGGTCCTGTCGCTGTCCGGTCTGTCGCTGGTCGTGAAGTGCGTCGTAGTACTCCGATATCCC # Questionable array : NO Score: 4.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.50, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.12, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCAACCGCCCACGGGTCCGTCTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [42-57] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.74 Confidence: LOW] # Array family : NA //